BLASTX nr result

ID: Atractylodes21_contig00008200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008200
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   663   0.0  
ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinu...   660   0.0  
ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|2...   659   0.0  
ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   646   0.0  
ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   643   0.0  

>ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
            gi|296087299|emb|CBI33673.3| unnamed protein product
            [Vitis vinifera]
          Length = 395

 Score =  663 bits (1711), Expect = 0.0
 Identities = 317/398 (79%), Positives = 342/398 (85%), Gaps = 1/398 (0%)
 Frame = -1

Query: 1311 MAVDNTAVIAWGSGEDGQLGLGDNEEKEWASSITSLNXXXXXXXXXXXXXXXXSLAICDD 1132
            MA    A+I+WGSGEDGQLG+G+NEEKEW  ++ +L                 SLAIC+D
Sbjct: 1    MASKPKAIISWGSGEDGQLGIGNNEEKEWVCAVKAL---AAQNVCSVVAGSRNSLAICED 57

Query: 1131 GKLFMWGWNQRGTLGHQPSTKTENIPSQVKALDNVNIVQAAIGGWHCLAVDDQGRAYAWG 952
            GKLF WGWNQRGTLGH P TKTENIPSQVKAL N  IVQAAIGGWHCLAVDDQGRAYAWG
Sbjct: 58   GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWG 117

Query: 951  GNEYGQCGEELDKKGDSGRTLRRDIVIPQRCASKLSVRQVAAGGTHSVVLTRDGHVWTWG 772
            GNEYGQCGEE ++K D+GR LRRDI IPQRCASKLSVRQVAAGGTHSVVLTR+GHVWTWG
Sbjct: 118  GNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWG 177

Query: 771  QPWPPGDIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGNLWVWGNNEYGQLGTGDTQP 592
            QPWPPGDIKQISTPVRVQGLE+V+LIAVGAFHNLALLEDG LW WGNNEYGQLGTGDTQP
Sbjct: 178  QPWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQP 237

Query: 591  RSQPVPVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDDKSSKMVPQQV 412
            RSQP+ VQGLS LTLVD+AAGGWHSTALTD+G VYGWGRGEHGRLGFGDDKSSKMVPQ+V
Sbjct: 238  RSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKV 297

Query: 411  QLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPIDLPPPK 232
            QLL  E+IVQ+SCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHP EVPI+LPP  
Sbjct: 298  QLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEVPINLPPAT 357

Query: 231  GDGGSEL-GRWCAKYVACGGRHTVAIVEWQPTDPDPLI 121
               GS   G WC+K VACGGRHT+AIVEW   +P+ LI
Sbjct: 358  NLSGSGAGGHWCSKLVACGGRHTLAIVEWLAHEPEQLI 395


>ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223544118|gb|EEF45643.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 393

 Score =  660 bits (1702), Expect = 0.0
 Identities = 314/388 (80%), Positives = 339/388 (87%), Gaps = 3/388 (0%)
 Frame = -1

Query: 1299 NTAVIAWGSGEDGQLGLGDNEEKEWASSITSLNXXXXXXXXXXXXXXXXSLAICDDGKLF 1120
            +T++IAWG+GEDGQLG+G NEEKEW   + +L                  LAICDDGKLF
Sbjct: 4    HTSLIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNS---LAICDDGKLF 60

Query: 1119 MWGWNQRGTLGHQPSTKTENIPSQVKALDNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEY 940
             WGWNQRGTLGH   TKTENIPSQVKAL+NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61   TWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 939  GQCGEELDKKGDSGRTLRRDIVIPQRCASKLSVRQVAAGGTHSVVLTRDGHVWTWGQPWP 760
            GQCGEE ++K D+G+TLRRDIVIPQRCA KL VRQVAAGGTHSVVLTR+GHVWTWGQPWP
Sbjct: 121  GQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 759  PGDIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGNLWVWGNNEYGQLGTGDTQPRSQP 580
            PGDIKQIS PVRVQGLE+VKLIAVGAFHNLAL EDG LW WGNNEYGQLGTGDTQPRSQP
Sbjct: 181  PGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 579  VPVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQQVQLL 403
            +PVQGLSGLTLVD+AAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQ+V LL
Sbjct: 241  IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 300

Query: 402  AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPIDLPPPKGDG 223
            AGEDIVQ+SCGGTHSVALT+DGRMFSFGRGDHGRLGYG+KVTTG P EVP D+PPPK   
Sbjct: 301  AGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLS 360

Query: 222  GSE--LGRWCAKYVACGGRHTVAIVEWQ 145
            G+E   G W AK VACGGRHT+AIVEW+
Sbjct: 361  GTEEAEGHWIAKLVACGGRHTLAIVEWK 388


>ref|XP_002329325.1| predicted protein [Populus trichocarpa] gi|222870779|gb|EEF07910.1|
            predicted protein [Populus trichocarpa]
          Length = 392

 Score =  659 bits (1700), Expect = 0.0
 Identities = 317/390 (81%), Positives = 338/390 (86%), Gaps = 3/390 (0%)
 Frame = -1

Query: 1296 TAVIAWGSGEDGQLGLGDNEEKEWASSITSLNXXXXXXXXXXXXXXXXSLAICDDGKLFM 1117
            ++VIAWGSGEDGQLG+G+NEEKEW   + +L                  LAICDDGKLF 
Sbjct: 5    SSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNS---LAICDDGKLFT 61

Query: 1116 WGWNQRGTLGHQPSTKTENIPSQVKALDNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 937
            WGWNQRGTLGH P TKTENIPSQVKAL NVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG
Sbjct: 62   WGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121

Query: 936  QCGEELDKKGDSGRTLRRDIVIPQRCASKLSVRQVAAGGTHSVVLTRDGHVWTWGQPWPP 757
            QCGEE ++K D+GR LRRDIVIPQRCASKL VRQVAAGGTHSVVLTR+GHVW+WGQPWPP
Sbjct: 122  QCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQPWPP 181

Query: 756  GDIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGNLWVWGNNEYGQLGTGDTQPRSQPV 577
            GDIKQIS PVRVQGLERV+LIAVGAFHNLAL EDG LW WGNNEYGQLGTGDTQPRSQP+
Sbjct: 182  GDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPI 241

Query: 576  PVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQQVQLLA 400
             VQGLSGLTLVD+AAGGWHSTALTD+GEVYGWGRGEHGRLGFGD DKSSKMVPQ+V LL 
Sbjct: 242  TVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLV 301

Query: 399  GEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPIDLPPPKG--D 226
            GEDIVQVSCGGTHSVALTRDGRM++FGRGDHGRLGYGRKVTTG P EVPID+PPPK   D
Sbjct: 302  GEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTD 361

Query: 225  GGSELGRWCAKYVACGGRHTVAIVEWQPTD 136
             G + GRW AK VA GGRHT+AIVEW   D
Sbjct: 362  SG-DAGRWIAKLVASGGRHTLAIVEWHTGD 390



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 2/169 (1%)
 Frame = -1

Query: 657 DGNLWVWGNNEYGQLGTGDTQPRSQPVPVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWG 478
           + ++  WG+ E GQLG G+ + +     V+ L    +  V AG  +S A+ D+G+++ WG
Sbjct: 4   ESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWG 63

Query: 477 RGEHGRLGFGDDKSSKMVPQQVQLLAGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRL 298
             + G LG   +  ++ +P QV+ LA  +IVQ + GG H +A+   GR +++G  ++G+ 
Sbjct: 64  WNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123

Query: 297 GY--GRKVTTGHPSEVPIDLPPPKGDGGSELGRWCAKYVACGGRHTVAI 157
           G    RK  TG P    I +P           +   + VA GG H+V +
Sbjct: 124 GEEPERKDDTGRPLRRDIVIPQRCA------SKLVVRQVAAGGTHSVVL 166


>ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Cucumis sativus]
          Length = 390

 Score =  646 bits (1667), Expect = 0.0
 Identities = 306/388 (78%), Positives = 334/388 (86%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1296 TAVIAWGSGEDGQLGLGDNEEKEWASSITSLNXXXXXXXXXXXXXXXXSLAICDDGKLFM 1117
            TA+IAWGSGEDGQLGLG+NEE+EW  +I +L                  LAI +DGKLF 
Sbjct: 5    TAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNS---LAITEDGKLFT 61

Query: 1116 WGWNQRGTLGHQPSTKTENIPSQVKALDNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 937
            WGWNQRGTLGH   TK+EN+PSQVKAL NV IVQAAIGGWHCLAVDDQGRAYAWGGNEYG
Sbjct: 62   WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121

Query: 936  QCGEELDKKGDSGRTLRRDIVIPQRCASKLSVRQVAAGGTHSVVLTRDGHVWTWGQPWPP 757
            QCGEE +KK ++GR  RRDI IPQRCA KL VRQVAAGGTHSVVLTR+GHVWTWGQPWPP
Sbjct: 122  QCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 181

Query: 756  GDIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGNLWVWGNNEYGQLGTGDTQPRSQPV 577
            GDI QIS PVRVQGL+ V+LIAVGAFHNLAL EDG LW WGNNEYGQLGTGDTQPRSQP+
Sbjct: 182  GDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPI 241

Query: 576  PVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQQVQLLA 400
            PVQGLSGLTLVD+AAGGWHSTALTD GEVYGWGRGEHGRLGFGD DKSSKMVPQ+VQLL+
Sbjct: 242  PVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLS 301

Query: 399  GEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPIDLPPPKGDGG 220
            GE+IVQ+SCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTG P EVPID+PPP+  G 
Sbjct: 302  GEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPR--GR 359

Query: 219  SELGRWCAKYVACGGRHTVAIVEWQPTD 136
            +E G W AK VACGGRHT+A+V+W+P D
Sbjct: 360  TENGHWIAKLVACGGRHTLALVQWKPED 387


>ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Cucumis sativus]
          Length = 390

 Score =  643 bits (1659), Expect = 0.0
 Identities = 305/388 (78%), Positives = 333/388 (85%), Gaps = 1/388 (0%)
 Frame = -1

Query: 1296 TAVIAWGSGEDGQLGLGDNEEKEWASSITSLNXXXXXXXXXXXXXXXXSLAICDDGKLFM 1117
            TA+IAWGSGEDGQLGLG+NEE+EW  +I +L                  LAI +DGKLF 
Sbjct: 5    TAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNS---LAITEDGKLFT 61

Query: 1116 WGWNQRGTLGHQPSTKTENIPSQVKALDNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 937
            WGWNQRGTLGH   TK+EN+PSQVKAL NV IVQAAIGGWHCLAVDDQGRAYAWGGNEYG
Sbjct: 62   WGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYG 121

Query: 936  QCGEELDKKGDSGRTLRRDIVIPQRCASKLSVRQVAAGGTHSVVLTRDGHVWTWGQPWPP 757
            QCGEE +KK ++GR  RRDI IPQRCA KL VRQVAAGGTHSVVLTR+GHVWTWGQPWPP
Sbjct: 122  QCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPP 181

Query: 756  GDIKQISTPVRVQGLERVKLIAVGAFHNLALLEDGNLWVWGNNEYGQLGTGDTQPRSQPV 577
            GDI QIS PVRVQGL+ V+LIAVGAFHNLAL EDG LW WGNNEYGQLGTGDTQPRSQP+
Sbjct: 182  GDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPI 241

Query: 576  PVQGLSGLTLVDVAAGGWHSTALTDEGEVYGWGRGEHGRLGFGD-DKSSKMVPQQVQLLA 400
            PVQGLSGLTLVD+AAGGWHSTALTD GEVYGWGRGEHGRLGFGD DKSSKMVPQ+VQLL+
Sbjct: 242  PVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLS 301

Query: 399  GEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPSEVPIDLPPPKGDGG 220
            GE+IVQ+SCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTG P EVPID+PPP+  G 
Sbjct: 302  GEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPR--GR 359

Query: 219  SELGRWCAKYVACGGRHTVAIVEWQPTD 136
            +E G W AK VACGGRHT+A+V+W+  D
Sbjct: 360  TENGHWIAKLVACGGRHTLALVQWKSED 387


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