BLASTX nr result

ID: Atractylodes21_contig00008001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00008001
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC89654.1| RBP42 [Elaeis guineensis]                              300   8e-79
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   288   2e-75
ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816...   285   2e-74
ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik...   284   3e-74
ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-l...   280   5e-73

>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  300 bits (767), Expect = 8e-79
 Identities = 164/284 (57%), Positives = 196/284 (69%), Gaps = 6/284 (2%)
 Frame = -1

Query: 1343 MDP--KKRKMEENGGQFTTDVTNDVVAPPASYSSTSLSPQDARKILEPFTKEXXXXXXXX 1170
            MDP  KKRK +ENG          VVA PA      L+P+DARKI+EPFT+E        
Sbjct: 1    MDPTSKKRKSDENGA---------VVASPAL-----LTPEDARKIVEPFTREHLLDIVRE 46

Query: 1169 XXXXXXXXXXXXRSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKPT 990
                        R+IAD DP QRKLFIRG+GWETTT+ LR++FS++GELEEA+VI DK T
Sbjct: 47   AMCRDAGVLDAVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKAT 106

Query: 989  GKSKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLS----NVDVSMRKIYVG 822
            GKSKGYGF+TFRH+DGA++ALK+PSKKIDGR+TV QLAAA   +     +DVS+RKIYVG
Sbjct: 107  GKSKGYGFITFRHIDGALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPAIDVSLRKIYVG 166

Query: 821  NVPFEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNI 642
            NVP ++ S+RLL+HFSSYGEIEEGPLGFDKQ+GK +GFA FVYKT EGA  SLVDP KNI
Sbjct: 167  NVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNI 226

Query: 641  DGHQVMCKMATDXXXXXXXXXXXXXGMAGDAPPHGSMPGSMNAG 510
            DGH ++CK+A D               AG A P G + G    G
Sbjct: 227  DGHHLVCKLAID-----GKKVKPGAPAAGAAAPVGGVQGQRMGG 265


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
            gi|147789426|emb|CAN66609.1| hypothetical protein
            VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  288 bits (737), Expect = 2e-75
 Identities = 162/291 (55%), Positives = 197/291 (67%), Gaps = 15/291 (5%)
 Frame = -1

Query: 1334 KKRKMEENGGQFTTDVTNDVVAPPASYSSTSLSPQDARKILEPFTKEXXXXXXXXXXXXX 1155
            KKRKM+ENG   +TD            S T L+P+DARKI+EPF  +             
Sbjct: 5    KKRKMDENG-LVSTD----------GDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRH 53

Query: 1154 XXXXXXXRSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKPTGKSKG 975
                   RSIAD D TQRKLFIRG+GW+TTT+ LR +FSA+GELEEA+VI DK T KSKG
Sbjct: 54   LDVLDAIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKG 113

Query: 974  YGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAA------ARDLSNVDVSMRKIYVGNVP 813
            YGFVTF+HVDGA++ALK+PSKKIDGR+TV QLAA      A + S VDVSMRKIYV NVP
Sbjct: 114  YGFVTFKHVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVP 173

Query: 812  FEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDGH 633
             ++ ++RLL+HFSSYGEIEEGPLGFDKQ+GK +GFA FVYKT E A+ +LVDP K IDG 
Sbjct: 174  VDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGR 233

Query: 632  QVMCKMATD-XXXXXXXXXXXXXGMAGDA--------PPHGSMPGSMNAGY 507
            Q++CK+A +              G+ G+A        PP GSMPGS+ + Y
Sbjct: 234  QLVCKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMPGSLGSQY 284


>ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
          Length = 384

 Score =  285 bits (730), Expect = 2e-74
 Identities = 151/251 (60%), Positives = 179/251 (71%), Gaps = 7/251 (2%)
 Frame = -1

Query: 1337 PKKRKMEENGGQFT-------TDVTNDVVAPPASYSSTSLSPQDARKILEPFTKEXXXXX 1179
            PKKRK +ENG   T       T+      A PA  S   L+ +D RKIL+PF++E     
Sbjct: 4    PKKRKTQENGDTTTDSPPPQSTEEAPLAAATPAPASP--LASEDIRKILQPFSQEQLLDL 61

Query: 1178 XXXXXXXXXXXXXXXRSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITD 999
                           R++AD D T RKLF+RG+  ETTT+ LRS+FS FGEL+EAIVI D
Sbjct: 62   LQSASLRHPDVLDAVRAVADCDSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIMD 121

Query: 998  KPTGKSKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGN 819
            K TG+SKGYGFV FRHVDGAI+ALK PSKKIDGR+TV QLAAA      DVS+RK++VGN
Sbjct: 122  KATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAAAGGPGGGDVSLRKVFVGN 181

Query: 818  VPFEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNID 639
            VPFEISSERLL  F  +GE+EEGPLGFDK SGK +GFAFFVYKTEEGAR SLV+P+K I+
Sbjct: 182  VPFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIE 241

Query: 638  GHQVMCKMATD 606
            GHQV+CK+A D
Sbjct: 242  GHQVICKLAVD 252


>ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
          Length = 384

 Score =  284 bits (727), Expect = 3e-74
 Identities = 149/246 (60%), Positives = 180/246 (73%), Gaps = 3/246 (1%)
 Frame = -1

Query: 1334 KKRKMEENGGQFTTDVT---NDVVAPPASYSSTSLSPQDARKILEPFTKEXXXXXXXXXX 1164
            KKRK EENG   TTD     +   +P A+ +   L+ +D RKIL+PF++E          
Sbjct: 5    KKRKTEENGD--TTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQSAS 62

Query: 1163 XXXXXXXXXXRSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKPTGK 984
                      R++AD D T RKLF+RG+  ETTT+ LR +FSAFGEL+EAIVI DK TG+
Sbjct: 63   LRHPDVLDAVRAVADLDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKATGR 122

Query: 983  SKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGNVPFEI 804
            SKGYGFV F HVDGAI+ALK+PSKKIDGR+TV QLAAA      DVS+RK++VGNVPFEI
Sbjct: 123  SKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAAAGGPGGGDVSLRKVFVGNVPFEI 182

Query: 803  SSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDGHQVM 624
            SSERLL  F  +GE+EEGPLGFDK SGK +GFAFFVYKTEEGAR SLV+P+K I+GHQV+
Sbjct: 183  SSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIEGHQVI 242

Query: 623  CKMATD 606
            CK+A D
Sbjct: 243  CKLAVD 248


>ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
            truncatula] gi|355509193|gb|AES90335.1| Heterogeneous
            nuclear ribonucleoprotein A3-like protein [Medicago
            truncatula]
          Length = 401

 Score =  280 bits (717), Expect = 5e-73
 Identities = 145/250 (58%), Positives = 180/250 (72%), Gaps = 4/250 (1%)
 Frame = -1

Query: 1343 MDPKKRKMEENGGQFTTDVTNDVVAPPASYSSTSLSP----QDARKILEPFTKEXXXXXX 1176
            M+ KKRK EENG         D  +PP+S  +  + P     D RKIL+PFT+E      
Sbjct: 1    MEFKKRKTEENG---------DANSPPSSIDAAVIPPALTSDDIRKILQPFTQEQLLDLL 51

Query: 1175 XXXXXXXXXXXXXXRSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDK 996
                          RS+AD D T+RKLF+RG+  ETTT+ LR++FS++G+L+EAIVI DK
Sbjct: 52   QSASLQHPDILDAVRSVADRDTTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDK 111

Query: 995  PTGKSKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGNV 816
             TG+SKGYGFV +RHVDGA++ALK+PSKKIDGR+TV QLAAA      DVS RK++VGNV
Sbjct: 112  ATGRSKGYGFVVYRHVDGAVLALKEPSKKIDGRMTVTQLAAAGSTGG-DVSSRKVFVGNV 170

Query: 815  PFEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDG 636
            PFE+S+E LLS FS YGEIEEGPLGFDK SGK +GFAFFVYKTEEGA+NS+ + +K +DG
Sbjct: 171  PFEVSAESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDG 230

Query: 635  HQVMCKMATD 606
            HQV+CK A D
Sbjct: 231  HQVICKFAVD 240


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