BLASTX nr result

ID: Atractylodes21_contig00007998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007998
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like...   527   e-147
ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|2...   515   e-143
gb|ABK94828.1| unknown [Populus trichocarpa]                          515   e-143
ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like...   514   e-143
ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycin...   506   e-141

>ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
            gi|296086696|emb|CBI32331.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  527 bits (1358), Expect = e-147
 Identities = 262/368 (71%), Positives = 298/368 (80%)
 Frame = -2

Query: 1490 MAIHLSAMFFNKPSISPPLFQHHRRPPLTVFXXXXXXXXXXXXPTIQIVGGKTASWYGSG 1311
            MA+ L  ++   P++S  +     +P  T               TIQIVGGK+   Y +G
Sbjct: 1    MAVALCGVWMPNPTLSGNVLPSQIKPSTTALAATPHLASSS---TIQIVGGKSHGQYVNG 57

Query: 1310 DMNSSNAANCFEDEYDWANLETDLYHWTKTLRPVQWYPGHIAKTERELKEQLKLMDVVIE 1131
             ++S+       +E  W NL+ DLYHWTK LRP+QWYPGHIAKTE+ELKEQLKLMDVVIE
Sbjct: 58   GVSSNRTFEDISEESYWTNLDADLYHWTKKLRPIQWYPGHIAKTEKELKEQLKLMDVVIE 117

Query: 1130 VRDARIPMSTSHPQMDSWLGNRKRILVLNREDMISTADRNAWADYYGKQGIKVVFSNGQL 951
            V+DARIP+STSHPQM+SWLGNRKRILVLNREDMIST DRNAWA YY  QGIKVVFSNGQL
Sbjct: 118  VQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNAWATYYAMQGIKVVFSNGQL 177

Query: 950  GMGTMKLGRLAKSVAAGVNMKRRARGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAA 771
            GMG+MKL RLAK++A+GVN+KRRA+GLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAA
Sbjct: 178  GMGSMKLSRLAKTLASGVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAA 237

Query: 770  PRPGVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICDDIGERSYDVTDVASVL 591
            PRPGVTR LKWV+FG DLELLDSPGIIPMR+SDQ+AAIKLAICDDIGERSYDV DVA++L
Sbjct: 238  PRPGVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAAIL 297

Query: 590  VQMLSRLPEANNNVLWERYKIDTDGRCGKTFVHKLAIQLFNGDEHQAAFRILSDFRKGRL 411
            VQML+R+P      L+ RYKIDTDG CG  FV KLA+QLFNGD HQAAFRIL+DFRKG+ 
Sbjct: 298  VQMLTRIPAVGPKALYNRYKIDTDGLCGNIFVQKLALQLFNGDTHQAAFRILTDFRKGKF 357

Query: 410  GLTALERP 387
            G  ALERP
Sbjct: 358  GWIALERP 365


>ref|XP_002307583.1| predicted protein [Populus trichocarpa] gi|222857032|gb|EEE94579.1|
            predicted protein [Populus trichocarpa]
          Length = 387

 Score =  515 bits (1326), Expect = e-143
 Identities = 256/325 (78%), Positives = 280/325 (86%), Gaps = 1/325 (0%)
 Frame = -2

Query: 1358 TIQIVGGK-TASWYGSGDMNSSNAANCFEDEYDWANLETDLYHWTKTLRPVQWYPGHIAK 1182
            TIQIVGGK T SW GSG+           +E DW + ETDLYHWTK LRPVQWYPGHIAK
Sbjct: 45   TIQIVGGKSTPSWQGSGNDVCGGGG----EETDWYDFETDLYHWTKPLRPVQWYPGHIAK 100

Query: 1181 TERELKEQLKLMDVVIEVRDARIPMSTSHPQMDSWLGNRKRILVLNREDMISTADRNAWA 1002
            TE+ELKEQLKLMDVVIEVRDARIP+ST+HPQMD+WLGNRKRILVLNREDMIS ADRNAWA
Sbjct: 101  TEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWA 160

Query: 1001 DYYGKQGIKVVFSNGQLGMGTMKLGRLAKSVAAGVNMKRRARGLLPRPVRAGIVGYPNVG 822
             Y+ +QGIKVV SNGQLGMGTMKL R AKS+AA VN+KRR +GLLPRPVRAGIVGYPNVG
Sbjct: 161  TYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVG 220

Query: 821  KSSLINRLLKRRMCPAAPRPGVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAIC 642
            KSSLINRLLKRRMCPAAPRPGVTR L+WVRFGNDLELLDSPGIIPMR+SDQ+AAIKLAIC
Sbjct: 221  KSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAIC 280

Query: 641  DDIGERSYDVTDVASVLVQMLSRLPEANNNVLWERYKIDTDGRCGKTFVHKLAIQLFNGD 462
            DDIGERSYDVTDVA++LVQ+L++LP      L  RYK+D D  CGK FV KL++ LFNGD
Sbjct: 281  DDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGD 340

Query: 461  EHQAAFRILSDFRKGRLGLTALERP 387
             HQAAFRILSDFRKG+ G  ALERP
Sbjct: 341  THQAAFRILSDFRKGKFGWAALERP 365


>gb|ABK94828.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  515 bits (1326), Expect = e-143
 Identities = 256/325 (78%), Positives = 280/325 (86%), Gaps = 1/325 (0%)
 Frame = -2

Query: 1358 TIQIVGGK-TASWYGSGDMNSSNAANCFEDEYDWANLETDLYHWTKTLRPVQWYPGHIAK 1182
            TIQIVGGK T SW GSG+           +E DW + ETDLYHWTK LRPVQWYPGHIAK
Sbjct: 45   TIQIVGGKSTPSWQGSGNDVCGGGG----EETDWYDFETDLYHWTKPLRPVQWYPGHIAK 100

Query: 1181 TERELKEQLKLMDVVIEVRDARIPMSTSHPQMDSWLGNRKRILVLNREDMISTADRNAWA 1002
            TE+ELKEQLKLMDVVIEVRDARIP+ST+HPQMD+WLGNRKRILVLNREDMIS ADRNAWA
Sbjct: 101  TEKELKEQLKLMDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWA 160

Query: 1001 DYYGKQGIKVVFSNGQLGMGTMKLGRLAKSVAAGVNMKRRARGLLPRPVRAGIVGYPNVG 822
             Y+ +QGIKVV SNGQLGMGTMKL R AKS+AA VN+KRR +GLLPRPVRAGIVGYPNVG
Sbjct: 161  TYFARQGIKVVLSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVG 220

Query: 821  KSSLINRLLKRRMCPAAPRPGVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAIC 642
            KSSLINRLLKRRMCPAAPRPGVTR L+WVRFGNDLELLDSPGIIPMR+SDQ+AAIKLAIC
Sbjct: 221  KSSLINRLLKRRMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAIC 280

Query: 641  DDIGERSYDVTDVASVLVQMLSRLPEANNNVLWERYKIDTDGRCGKTFVHKLAIQLFNGD 462
            DDIGERSYDVTDVA++LVQ+L++LP      L  RYK+D D  CGK FV KL++ LFNGD
Sbjct: 281  DDIGERSYDVTDVAAILVQILTKLPTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGD 340

Query: 461  EHQAAFRILSDFRKGRLGLTALERP 387
             HQAAFRILSDFRKG+ G  ALERP
Sbjct: 341  THQAAFRILSDFRKGKFGWAALERP 365


>ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
            gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome
            biogenesis GTPase A-like [Cucumis sativus]
          Length = 370

 Score =  514 bits (1324), Expect = e-143
 Identities = 254/324 (78%), Positives = 284/324 (87%)
 Frame = -2

Query: 1358 TIQIVGGKTASWYGSGDMNSSNAANCFEDEYDWANLETDLYHWTKTLRPVQWYPGHIAKT 1179
            TIQIVGGKT+++ G  D     A+N    E DW + E DLY+WT  LRPVQWYPGHIAKT
Sbjct: 46   TIQIVGGKTSNFLG--DSTPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKT 103

Query: 1178 ERELKEQLKLMDVVIEVRDARIPMSTSHPQMDSWLGNRKRILVLNREDMISTADRNAWAD 999
            E+ELK+QLKLMDVVIEVRDARIPMSTSHPQMD+WLGNR+RILVLNREDMIS+ADRNAWA 
Sbjct: 104  EKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWAT 163

Query: 998  YYGKQGIKVVFSNGQLGMGTMKLGRLAKSVAAGVNMKRRARGLLPRPVRAGIVGYPNVGK 819
            Y+ +QGIKVVFSNGQ GMGTMKLGRLAK++AA VN+KRRA+GLLPR VRAGIVGYPNVGK
Sbjct: 164  YFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGK 223

Query: 818  SSLINRLLKRRMCPAAPRPGVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLAICD 639
            SSLINRLLKRRMCPAAPRPGVTR LKWVRFGNDLELLDSPGIIPMR+SDQTAAIKLAICD
Sbjct: 224  SSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICD 283

Query: 638  DIGERSYDVTDVASVLVQMLSRLPEANNNVLWERYKIDTDGRCGKTFVHKLAIQLFNGDE 459
            DIGERSY+  DVA++LVQ+L++LP      L +RYK+D  G+CG+ FV KLA+QLFNGD 
Sbjct: 284  DIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDN 343

Query: 458  HQAAFRILSDFRKGRLGLTALERP 387
            HQAAFRILSDFRKG+ G TALERP
Sbjct: 344  HQAAFRILSDFRKGKFGWTALERP 367


>ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
            gi|255634965|gb|ACU17841.1| unknown [Glycine max]
          Length = 391

 Score =  506 bits (1303), Expect = e-141
 Identities = 250/327 (76%), Positives = 283/327 (86%), Gaps = 3/327 (0%)
 Frame = -2

Query: 1358 TIQIVGGKTASWY--GSGDMNSSNAANCFEDEYD-WANLETDLYHWTKTLRPVQWYPGHI 1188
            TIQI+G    SW   G G+ N++N  +  + E D W+ L+TDLYHWTK LRPVQW+PGHI
Sbjct: 38   TIQIIGVGGPSWRENGYGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHI 97

Query: 1187 AKTERELKEQLKLMDVVIEVRDARIPMSTSHPQMDSWLGNRKRILVLNREDMISTADRNA 1008
            AK E+ELKEQLKLMDVVIEVRD RIPMSTSHPQMD WLGNRKRILVLNREDMISTADRNA
Sbjct: 98   AKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDPWLGNRKRILVLNREDMISTADRNA 157

Query: 1007 WADYYGKQGIKVVFSNGQLGMGTMKLGRLAKSVAAGVNMKRRARGLLPRPVRAGIVGYPN 828
            WADY+ + G KVVFSNGQLGMGTMKLGRLAK +AA VN+KRR++GLLPR VRAGIVGYPN
Sbjct: 158  WADYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPN 217

Query: 827  VGKSSLINRLLKRRMCPAAPRPGVTRALKWVRFGNDLELLDSPGIIPMRMSDQTAAIKLA 648
            VGKSSLINRLLKRRMCPAAPRPGVTR L+WVRFG DLELLDSPGI+PMR+SDQ+AAIKLA
Sbjct: 218  VGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLA 277

Query: 647  ICDDIGERSYDVTDVASVLVQMLSRLPEANNNVLWERYKIDTDGRCGKTFVHKLAIQLFN 468
            ICDDIGERSYDV DVA++LVQMLS+LP    + L +RYKID D R G+ F+ KLA+++FN
Sbjct: 278  ICDDIGERSYDVADVAAILVQMLSKLPTVGRDALCKRYKIDVDCRDGRIFIEKLAVRVFN 337

Query: 467  GDEHQAAFRILSDFRKGRLGLTALERP 387
            GD HQAAFR+L+DFRKG+ G TALERP
Sbjct: 338  GDVHQAAFRVLADFRKGKFGWTALERP 364


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