BLASTX nr result

ID: Atractylodes21_contig00007976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007976
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   248   4e-64
ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-64
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   246   1e-63
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   246   1e-63
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   246   2e-63

>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  248 bits (633), Expect = 4e-64
 Identities = 123/151 (81%), Positives = 129/151 (85%)
 Frame = -1

Query: 454  NEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFKFMDPPPQDNILNSMYQLWVLGALND 275
            NEMLP PVPEIQRTNLGNVV           LDF FMDPPPQDNILNSMYQLWVLGALN+
Sbjct: 920  NEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQDNILNSMYQLWVLGALNN 979

Query: 274  VGSLTDLEWKMVEFPLDPPLAKMVLMGEQLGCLNGVLTIVSMLSVPSVFFRLKDRAEESD 95
            VG LTDL WKMVEFPLDPPLAKM+LMGE+LGCLN VLTIVSMLSVPSVFFR KDRAE+SD
Sbjct: 980  VGGLTDLGWKMVEFPLDPPLAKMLLMGEELGCLNEVLTIVSMLSVPSVFFRPKDRAEQSD 1039

Query: 94   VAREKLLVPESDHLTLLNVYQQWEANQYRGD 2
             AREK  VPESDHLTLLNVY QW+ +QYRGD
Sbjct: 1040 AAREKFFVPESDHLTLLNVYLQWKEHQYRGD 1070


>ref|XP_002316148.1| predicted protein [Populus trichocarpa] gi|222865188|gb|EEF02319.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  247 bits (630), Expect = 8e-64
 Identities = 122/151 (80%), Positives = 129/151 (85%)
 Frame = -1

Query: 454 NEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFKFMDPPPQDNILNSMYQLWVLGALND 275
           NEMLP PVPEIQRTNLGNVV           LDF FMDPPPQDNILNSMYQLWVLGALN+
Sbjct: 150 NEMLPSPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALNN 209

Query: 274 VGSLTDLEWKMVEFPLDPPLAKMVLMGEQLGCLNGVLTIVSMLSVPSVFFRLKDRAEESD 95
           VG+LTDL WKMVEFPLDPPLAKM+L+GEQLGC+N VLTIVSMLSVPSVFFR KDR EESD
Sbjct: 210 VGALTDLGWKMVEFPLDPPLAKMLLIGEQLGCINEVLTIVSMLSVPSVFFRPKDRVEESD 269

Query: 94  VAREKLLVPESDHLTLLNVYQQWEANQYRGD 2
            AREK  VPESDHLTLLNVY QW+ +QYRGD
Sbjct: 270 AAREKFFVPESDHLTLLNVYLQWKEHQYRGD 300


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score =  246 bits (628), Expect = 1e-63
 Identities = 121/151 (80%), Positives = 128/151 (84%)
 Frame = -1

Query: 454  NEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFKFMDPPPQDNILNSMYQLWVLGALND 275
            NEMLP PVPEIQRTNLGNVV           LDF FMDPPPQDNILNSMYQLWVLGALN+
Sbjct: 829  NEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNN 888

Query: 274  VGSLTDLEWKMVEFPLDPPLAKMVLMGEQLGCLNGVLTIVSMLSVPSVFFRLKDRAEESD 95
            VG LTDL WKMVEFPLDPPLAKM+LMGEQLGCL+ VLTIVSMLSVPSVFFR KDR EESD
Sbjct: 889  VGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRVEESD 948

Query: 94   VAREKLLVPESDHLTLLNVYQQWEANQYRGD 2
             ARE+  +PESDHLTL NVYQQW+ +QYRGD
Sbjct: 949  AARERFFIPESDHLTLYNVYQQWKQHQYRGD 979


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  246 bits (628), Expect = 1e-63
 Identities = 121/151 (80%), Positives = 128/151 (84%)
 Frame = -1

Query: 454  NEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFKFMDPPPQDNILNSMYQLWVLGALND 275
            NEMLP PVPEIQRTNLGNVV           LDF FMDPPPQDNILNSMYQLWVLGALN+
Sbjct: 949  NEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNN 1008

Query: 274  VGSLTDLEWKMVEFPLDPPLAKMVLMGEQLGCLNGVLTIVSMLSVPSVFFRLKDRAEESD 95
            VG LTDL WKMVEFPLDPPLAKM+LMGEQLGCL+ VLTIVSMLSVPSVFFR KDR EESD
Sbjct: 1009 VGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRVEESD 1068

Query: 94   VAREKLLVPESDHLTLLNVYQQWEANQYRGD 2
             ARE+  +PESDHLTL NVYQQW+ +QYRGD
Sbjct: 1069 AARERFFIPESDHLTLYNVYQQWKQHQYRGD 1099


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  246 bits (627), Expect = 2e-63
 Identities = 122/151 (80%), Positives = 129/151 (85%)
 Frame = -1

Query: 454  NEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFKFMDPPPQDNILNSMYQLWVLGALND 275
            NE+L  PVPEIQRTNLGNVV           LDF FMDPPPQDNILNSMYQLWVLGALN+
Sbjct: 940  NELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQLWVLGALNN 999

Query: 274  VGSLTDLEWKMVEFPLDPPLAKMVLMGEQLGCLNGVLTIVSMLSVPSVFFRLKDRAEESD 95
            VG LT+L WKMVEFPLDPPLAKM+L+GEQL C+N VLTIVSMLSVPSVFFR KDRAEESD
Sbjct: 1000 VGGLTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSMLSVPSVFFRPKDRAEESD 1059

Query: 94   VAREKLLVPESDHLTLLNVYQQWEANQYRGD 2
             AREK  VPESDHLTLLNVYQQW+ANQYRGD
Sbjct: 1060 AAREKFFVPESDHLTLLNVYQQWKANQYRGD 1090


Top