BLASTX nr result

ID: Atractylodes21_contig00007974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007974
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   307   1e-81
emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]   307   1e-81
ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group] g...   304   7e-81
tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea m...   304   7e-81
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   304   7e-81

>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  307 bits (786), Expect = 1e-81
 Identities = 158/206 (76%), Positives = 161/206 (78%)
 Frame = -3

Query: 618  RLYTESAYQNEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFDFMDPPPQDNILNSMYQ 439
            RLYTESAY NE+L  PVPEIQRTNLGNVV           LDFDFMDPPPQDNILNSMYQ
Sbjct: 931  RLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQ 990

Query: 438  LWVLGALNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWKMVEFPLDPPLAKMLLMG 259
            LWVLGALNNV                              GWKMVEFPLDPPLAKMLL+G
Sbjct: 991  LWVLGALNNVGGLTEL------------------------GWKMVEFPLDPPLAKMLLIG 1026

Query: 258  EQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 79
            EQLEC+NEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ
Sbjct: 1027 EQLECINEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 1086

Query: 78   YRGDWCNDHFLQVKGLRKAREVRSQL 1
            YRGDWCNDHFL VKGLRKAREVRSQL
Sbjct: 1087 YRGDWCNDHFLHVKGLRKAREVRSQL 1112


>emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]
          Length = 855

 Score =  307 bits (786), Expect = 1e-81
 Identities = 158/206 (76%), Positives = 161/206 (78%)
 Frame = -3

Query: 618  RLYTESAYQNEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFDFMDPPPQDNILNSMYQ 439
            RLYTESAY NE+L  PVPEIQRTNLGNVV           LDFDFMDPPPQDNILNSMYQ
Sbjct: 497  RLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQDNILNSMYQ 556

Query: 438  LWVLGALNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWKMVEFPLDPPLAKMLLMG 259
            LWVLGALNNV                              GWKMVEFPLDPPLAKMLL+G
Sbjct: 557  LWVLGALNNVGGLTEL------------------------GWKMVEFPLDPPLAKMLLIG 592

Query: 258  EQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 79
            EQLEC+NEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ
Sbjct: 593  EQLECINEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 652

Query: 78   YRGDWCNDHFLQVKGLRKAREVRSQL 1
            YRGDWCNDHFL VKGLRKAREVRSQL
Sbjct: 653  YRGDWCNDHFLHVKGLRKAREVRSQL 678


>ref|NP_001059742.1| Os07g0508000 [Oryza sativa Japonica Group]
            gi|33146483|dbj|BAC79592.1| putative DEAH-box RNA
            helicase [Oryza sativa Japonica Group]
            gi|113611278|dbj|BAF21656.1| Os07g0508000 [Oryza sativa
            Japonica Group]
          Length = 1280

 Score =  304 bits (779), Expect = 7e-81
 Identities = 157/206 (76%), Positives = 161/206 (78%)
 Frame = -3

Query: 618  RLYTESAYQNEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFDFMDPPPQDNILNSMYQ 439
            RL+TESAYQNEMLP PVPEIQRTNLGNVV           LDFDFMDPPPQ+NILNSMYQ
Sbjct: 923  RLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQENILNSMYQ 982

Query: 438  LWVLGALNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWKMVEFPLDPPLAKMLLMG 259
            LWVLGALNNV                              GWKMVEFPLDP LAKMLLMG
Sbjct: 983  LWVLGALNNVGALTVI------------------------GWKMVEFPLDPTLAKMLLMG 1018

Query: 258  EQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 79
            EQLECL+EVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVY QWK+NQ
Sbjct: 1019 EQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQ 1078

Query: 78   YRGDWCNDHFLQVKGLRKAREVRSQL 1
            YRGDWCNDHFL VKGLRKAREVRSQL
Sbjct: 1079 YRGDWCNDHFLHVKGLRKAREVRSQL 1104


>tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 1450

 Score =  304 bits (779), Expect = 7e-81
 Identities = 157/206 (76%), Positives = 161/206 (78%)
 Frame = -3

Query: 618  RLYTESAYQNEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFDFMDPPPQDNILNSMYQ 439
            RL+TESAYQNEMLP PVPEIQRTNLGNVV           LDFDFMDPPPQ+NILNSMYQ
Sbjct: 1093 RLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLRVENLLDFDFMDPPPQENILNSMYQ 1152

Query: 438  LWVLGALNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWKMVEFPLDPPLAKMLLMG 259
            LWVLGALNNV                              GWKMVEFPLDP LAKMLLMG
Sbjct: 1153 LWVLGALNNVGGLTEI------------------------GWKMVEFPLDPTLAKMLLMG 1188

Query: 258  EQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 79
            EQLECL+EVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVY QWK+NQ
Sbjct: 1189 EQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQ 1248

Query: 78   YRGDWCNDHFLQVKGLRKAREVRSQL 1
            YRGDWCNDHFL VKGLRKAREVRSQL
Sbjct: 1249 YRGDWCNDHFLHVKGLRKAREVRSQL 1274


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
            gi|241926289|gb|EER99433.1| hypothetical protein
            SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  304 bits (779), Expect = 7e-81
 Identities = 157/206 (76%), Positives = 161/206 (78%)
 Frame = -3

Query: 618  RLYTESAYQNEMLPQPVPEIQRTNLGNVVXXXXXXXXXXXLDFDFMDPPPQDNILNSMYQ 439
            RL+TESAYQNEMLP PVPEIQRTNLGNVV           LDFDFMDPPPQ+NILNSMYQ
Sbjct: 914  RLFTESAYQNEMLPNPVPEIQRTNLGNVVLLLKSLRVENLLDFDFMDPPPQENILNSMYQ 973

Query: 438  LWVLGALNNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWKMVEFPLDPPLAKMLLMG 259
            LWVLGALNNV                              GWKMVEFPLDP LAKMLLMG
Sbjct: 974  LWVLGALNNVGGLTEI------------------------GWKMVEFPLDPTLAKMLLMG 1009

Query: 258  EQLECLNEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWKANQ 79
            EQLECL+EVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVY QWK+NQ
Sbjct: 1010 EQLECLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQ 1069

Query: 78   YRGDWCNDHFLQVKGLRKAREVRSQL 1
            YRGDWCNDHFL VKGLRKAREVRSQL
Sbjct: 1070 YRGDWCNDHFLHVKGLRKAREVRSQL 1095


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