BLASTX nr result

ID: Atractylodes21_contig00007914 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007914
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...   143   1e-32
ref|XP_003626823.1| Pentatricopeptide repeat-containing protein ...   142   4e-32

>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 313

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/105 (68%), Positives = 89/105 (84%)
 Frame = -3

Query: 319 SAQKVFDEMSERNVVTWSAMMSGFGLYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACS 140
           +A+KVFD M+ERN+VTWSAMM+G+G++G   EVFELF+ MV  G  PDG+TFTAVL ACS
Sbjct: 161 AARKVFDRMTERNLVTWSAMMAGYGVHGVFGEVFELFDGMVDAGEVPDGVTFTAVLAACS 220

Query: 139 HGGLADKGKEYFQMMKDRFGLRPGLEHCTCIVDMLGRAGRVEEAE 5
           HGG  + G++YF MM++RFG+RP LEH TC+VDMLGRAGRVEEAE
Sbjct: 221 HGGFMENGRKYFGMMEERFGVRPRLEHYTCMVDMLGRAGRVEEAE 265


>ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 315

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/104 (65%), Positives = 88/104 (84%)
 Frame = -3

Query: 316 AQKVFDEMSERNVVTWSAMMSGFGLYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSH 137
           A+K+FD M +RN +T+S MM+G+G++GKC EVFELF++MV  G  PDG+TFTAVL+ACSH
Sbjct: 163 ARKLFDRMWQRNEITFSTMMAGYGMHGKCGEVFELFDKMVEAGERPDGVTFTAVLSACSH 222

Query: 136 GGLADKGKEYFQMMKDRFGLRPGLEHCTCIVDMLGRAGRVEEAE 5
           GG  DKG+EY +MM+ RFG++PGL H TC+VDMLGR G+VEEAE
Sbjct: 223 GGFIDKGREYLKMMEVRFGVKPGLHHYTCMVDMLGRVGQVEEAE 266


>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449515851|ref|XP_004164961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 308

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/104 (67%), Positives = 88/104 (84%)
 Frame = -3

Query: 316 AQKVFDEMSERNVVTWSAMMSGFGLYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSH 137
           A+KVFD M ERN V+WSA+M+G+G++G   EVF LFERMV +G +PD LTFT++LTACSH
Sbjct: 163 ARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSH 222

Query: 136 GGLADKGKEYFQMMKDRFGLRPGLEHCTCIVDMLGRAGRVEEAE 5
           GGL +KGKEYF MM+  F LRPGL+H TC+VD+LGR+G+VEEAE
Sbjct: 223 GGLIEKGKEYFGMMRMEFHLRPGLQHYTCMVDLLGRSGQVEEAE 266


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/104 (63%), Positives = 82/104 (78%)
 Frame = -3

Query: 316 AQKVFDEMSERNVVTWSAMMSGFGLYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSH 137
           A+KVFD M ERN VTWS MM+G+G++G+ EEVFE+F RMV  G   D ++FT VLTACSH
Sbjct: 163 ARKVFDGMCERNEVTWSTMMAGYGMHGRFEEVFEMFNRMVEVGERMDNVSFTVVLTACSH 222

Query: 136 GGLADKGKEYFQMMKDRFGLRPGLEHCTCIVDMLGRAGRVEEAE 5
           GG  +KG+E F+MMK RFG++P + H TC+VDMLGR G VEEAE
Sbjct: 223 GGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDMLGRVGLVEEAE 266


>ref|XP_003626823.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520845|gb|AET01299.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 355

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/104 (62%), Positives = 82/104 (78%)
 Frame = -3

Query: 316 AQKVFDEMSERNVVTWSAMMSGFGLYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSH 137
           A+KVFD M ERN VTWS M++G+G++G+ EEVFE+F RMV  G   D ++FT VLTACSH
Sbjct: 163 ARKVFDGMCERNEVTWSTMIAGYGMHGRFEEVFEMFNRMVEVGERMDNVSFTVVLTACSH 222

Query: 136 GGLADKGKEYFQMMKDRFGLRPGLEHCTCIVDMLGRAGRVEEAE 5
           GG  +KG+E F+MMK RFG++P + H TC+VDMLGR G VEEAE
Sbjct: 223 GGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDMLGRVGLVEEAE 266


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