BLASTX nr result

ID: Atractylodes21_contig00007894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007894
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloro...   179   5e-43
emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]   179   5e-43
ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   166   3e-39
ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   166   3e-39
gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]   166   3e-39

>ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloroplastic isoform 1
           [Vitis vinifera] gi|359492152|ref|XP_003634370.1|
           PREDICTED: 50S ribosomal protein L31, chloroplastic
           isoform 2 [Vitis vinifera] gi|302142528|emb|CBI19731.3|
           unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  179 bits (454), Expect = 5e-43
 Identities = 91/127 (71%), Positives = 105/127 (82%), Gaps = 1/127 (0%)
 Frame = +2

Query: 50  MALSLSNSFLHRNSPPPTTLSMKKVATAVSINQPRWTCRKKDIHPEFYEDAKVYCSGEHV 229
           MAL+LSN+FL R   PPT L +KK A AV   +P+WTCRKKDIHP+FYEDAKVYC+GE V
Sbjct: 1   MALTLSNTFLQRKLSPPT-LPIKK-ANAVRAYRPQWTCRKKDIHPQFYEDAKVYCNGELV 58

Query: 230 LTTSGTKKEYVVDVWSGNHPFYLGSRSANLIDADQVEKFRKKFGGVGGLSQFMEIPTLK- 406
           +TT GT+KEYVVDVWSGNHPFYLG+RS  L+DADQVEKFRKKFG +   SQ MEIP LK 
Sbjct: 59  MTTGGTQKEYVVDVWSGNHPFYLGNRSGLLVDADQVEKFRKKFGEI---SQIMEIPVLKY 115

Query: 407 GEIIIPP 427
           GEI++PP
Sbjct: 116 GEIVLPP 122


>emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]
          Length = 241

 Score =  179 bits (454), Expect = 5e-43
 Identities = 91/127 (71%), Positives = 105/127 (82%), Gaps = 1/127 (0%)
 Frame = +2

Query: 50  MALSLSNSFLHRNSPPPTTLSMKKVATAVSINQPRWTCRKKDIHPEFYEDAKVYCSGEHV 229
           MAL+LSN+FL R   PPT L +KK A AV   +P+WTCRKKDIHP+FYEDAKVYC+GE V
Sbjct: 1   MALTLSNTFLQRKLSPPT-LPIKK-ANAVRAYRPQWTCRKKDIHPQFYEDAKVYCNGELV 58

Query: 230 LTTSGTKKEYVVDVWSGNHPFYLGSRSANLIDADQVEKFRKKFGGVGGLSQFMEIPTLK- 406
           +TT GT+KEYVVDVWSGNHPFYLG+RS  L+DADQVEKFRKKFG +   SQ MEIP LK 
Sbjct: 59  MTTGGTQKEYVVDVWSGNHPFYLGNRSGLLVDADQVEKFRKKFGEI---SQIMEIPVLKY 115

Query: 407 GEIIIPP 427
           GEI++PP
Sbjct: 116 GEIVLPP 122


>ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score =  166 bits (421), Expect = 3e-39
 Identities = 88/140 (62%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
 Frame = +2

Query: 17  SSSSHTHR---QTKMALSLSNSFLHRNSP-PPTTLSMKKVATAVSINQPRWTCRKKDIHP 184
           SS S+ H       MAL+L+NSFL    P  P     K+  +     +P  TCRKKD+HP
Sbjct: 16  SSPSYPHAPQPNAAMALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHP 75

Query: 185 EFYEDAKVYCSGEHVLTTSGTKKEYVVDVWSGNHPFYLGSRSANLIDADQVEKFRKKFGG 364
           +FYEDAKVYC+GE V+TT GT+KEY VDVWSGNHPFYLGSRSA L+DADQVEKFRKKF  
Sbjct: 76  QFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF-- 133

Query: 365 VGGLSQFMEIPTLKGEIIIP 424
            G LSQ MEIP LKGEII+P
Sbjct: 134 -GELSQLMEIPVLKGEIILP 152


>ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score =  166 bits (421), Expect = 3e-39
 Identities = 88/140 (62%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
 Frame = +2

Query: 17  SSSSHTHR---QTKMALSLSNSFLHRNSP-PPTTLSMKKVATAVSINQPRWTCRKKDIHP 184
           SS S+ H       MAL+L+NSFL    P  P     K+  +     +P  TCRKKD+HP
Sbjct: 16  SSPSYPHAPQPNAAMALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHP 75

Query: 185 EFYEDAKVYCSGEHVLTTSGTKKEYVVDVWSGNHPFYLGSRSANLIDADQVEKFRKKFGG 364
           +FYEDAKVYC+GE V+TT GT+KEY VDVWSGNHPFYLGSRSA L+DADQVEKFRKKF  
Sbjct: 76  QFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF-- 133

Query: 365 VGGLSQFMEIPTLKGEIIIP 424
            G LSQ MEIP LKGEII+P
Sbjct: 134 -GELSQLMEIPVLKGEIILP 152


>gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]
          Length = 161

 Score =  166 bits (421), Expect = 3e-39
 Identities = 88/140 (62%), Positives = 101/140 (72%), Gaps = 4/140 (2%)
 Frame = +2

Query: 17  SSSSHTHR---QTKMALSLSNSFLHRNSP-PPTTLSMKKVATAVSINQPRWTCRKKDIHP 184
           SS S+ H       MAL+L+NSFL    P  P     K   +    ++P  TCRKKD+HP
Sbjct: 14  SSPSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHP 73

Query: 185 EFYEDAKVYCSGEHVLTTSGTKKEYVVDVWSGNHPFYLGSRSANLIDADQVEKFRKKFGG 364
           +FYEDAKVYC+GE V+TT GT+KEY VDVWSGNHPFYLGSRSA L+DADQVEKFRKKF  
Sbjct: 74  QFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKF-- 131

Query: 365 VGGLSQFMEIPTLKGEIIIP 424
            G LSQ MEIP LKGEII+P
Sbjct: 132 -GELSQLMEIPVLKGEIILP 150


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