BLASTX nr result
ID: Atractylodes21_contig00007868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00007868
(961 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi... 446 e-123
emb|CBI31119.3| unnamed protein product [Vitis vinifera] 418 e-114
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu... 413 e-113
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,... 394 e-107
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2... 365 1e-98
>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 446 bits (1148), Expect = e-123
Identities = 212/316 (67%), Positives = 255/316 (80%)
Frame = -3
Query: 950 VASKYLKSSRKALSLLDQPCLTMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADL 771
V SKYLKSSR+ LSLLDQ C+TM+HI QI +HL SG++ DPFAAG+++ C VS D+
Sbjct: 5 VGSKYLKSSRRVLSLLDQ-CVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDI 63
Query: 770 QHAYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRAC 591
HAY LF S+P R+++IWNTM+RAF ++ + LSL+K M S GFLP N+TFSF+L+AC
Sbjct: 64 SHAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQAC 123
Query: 590 ADLCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWT 411
A L L G++ HA A++LGWE+YDFVQNGL+HLYA CNC+D RRLFD S NRDV+TWT
Sbjct: 124 AQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWT 183
Query: 410 AVINGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQP 231
AVINGY KSG+V VAR+LFDEMP+KN VSWS MI GY Q+GLF+EAL+LFNDM GF+P
Sbjct: 184 AVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRP 243
Query: 230 NHSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGCIELAYRVF 51
NH IV L+AC FLGALDQGRWIHAYVD+ +M LD ILGTAL+DMYAKCGC+E A RVF
Sbjct: 244 NHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVF 303
Query: 50 EEMPYRDVFAFTSLIS 3
+EM RDVFAFTSLIS
Sbjct: 304 DEMLDRDVFAFTSLIS 319
Score = 82.0 bits (201), Expect = 2e-13
Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Frame = -3
Query: 764 AYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACAD 585
A LF +P ++ W+ MI + + R AL LF M GF P + L ACA
Sbjct: 198 ARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAF 257
Query: 584 LCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTAV 405
L L G HA +D R + D I TA+
Sbjct: 258 LGALDQGRWIHAY-------------------------VDRNRMVLDR------ILGTAL 286
Query: 404 INGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQPNH 225
I+ Y K G VE A +FDEM ++ +++ +I+G G A+++F M + G PN
Sbjct: 287 IDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNE 346
Query: 224 SGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGT-----ALVDMYAKCGCIELAY 60
+ LSAC +G +++G I K + GI LVD+ + G +E A
Sbjct: 347 VTFICLLSACSRVGLVEEGLRIF----KSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAK 402
Query: 59 RVFEEMP 39
RV EMP
Sbjct: 403 RVVREMP 409
>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 418 bits (1074), Expect = e-114
Identities = 195/294 (66%), Positives = 236/294 (80%)
Frame = -3
Query: 884 MSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADLQHAYTLFRSIPHRSTYIWNTMI 705
M+HI QI +HL SG++ DPFAAG+++ C VS D+ HAY LF S+P R+++IWNTM+
Sbjct: 1 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60
Query: 704 RAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACADLCQLKLGLVCHALAIKLGWE 525
RAF ++ + LSL+K M S GFLP N+TFSF+L+ACA L L G++ HA A++LGWE
Sbjct: 61 RAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWE 120
Query: 524 SYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTAVINGYVKSGKVEVARELFDEM 345
+YDFVQNGL+HLYA CNC+D RRLFD S NRDV+TWTAVINGY KSG+V VAR+LFDEM
Sbjct: 121 AYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEM 180
Query: 344 PKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQPNHSGIVVGLSACGFLGALDQGR 165
P+KN VSWS MI GY Q+GLF+EAL+LFNDM GF+PNH IV L+AC FLGALDQGR
Sbjct: 181 PEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGR 240
Query: 164 WIHAYVDKKKMELDGILGTALVDMYAKCGCIELAYRVFEEMPYRDVFAFTSLIS 3
WIHAYVD+ +M LD ILGTAL+DMYAKCGC+E A RVF+EM RDVFAFTSLIS
Sbjct: 241 WIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLIS 294
Score = 82.0 bits (201), Expect = 2e-13
Identities = 72/247 (29%), Positives = 104/247 (42%), Gaps = 5/247 (2%)
Frame = -3
Query: 764 AYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACAD 585
A LF +P ++ W+ MI + + R AL LF M GF P + L ACA
Sbjct: 173 ARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAF 232
Query: 584 LCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTAV 405
L L G HA +D R + D I TA+
Sbjct: 233 LGALDQGRWIHAY-------------------------VDRNRMVLDR------ILGTAL 261
Query: 404 INGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQPNH 225
I+ Y K G VE A +FDEM ++ +++ +I+G G A+++F M + G PN
Sbjct: 262 IDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNE 321
Query: 224 SGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGT-----ALVDMYAKCGCIELAY 60
+ LSAC +G +++G I K + GI LVD+ + G +E A
Sbjct: 322 VTFICLLSACSRVGLVEEGLRIF----KSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAK 377
Query: 59 RVFEEMP 39
RV EMP
Sbjct: 378 RVVREMP 384
>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 532
Score = 413 bits (1062), Expect = e-113
Identities = 203/315 (64%), Positives = 250/315 (79%)
Frame = -3
Query: 947 ASKYLKSSRKALSLLDQPCLTMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHADLQ 768
ASKY+K+S++ LSLL+Q C TMS I Q+H+HLI S S DPFAAGK++ VS++AD+
Sbjct: 3 ASKYVKASQRCLSLLEQ-CRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADIS 61
Query: 767 HAYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACA 588
HAY LF S+PHR+T+IWNT+IR F E++++ ALSL+K M GFLP N+TFSFVLRAC
Sbjct: 62 HAYKLFLSLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACT 121
Query: 587 DLCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTA 408
D +GL HA IKLGWESYDFV NGLIHLYA + ++ R+LFD S+ RDVITWTA
Sbjct: 122 D--NSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTA 179
Query: 407 VINGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQPN 228
+INGYVKSG VE ARELFD+MP++N VSWS MI GYV +G+F+EAL+LFND+ G +PN
Sbjct: 180 LINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPN 239
Query: 227 HSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGCIELAYRVFE 48
H+GIV L+AC +LG+LD GRWIHAYVD+ ELD +LGTALVDMYAKCGCIE+A VFE
Sbjct: 240 HAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFE 299
Query: 47 EMPYRDVFAFTSLIS 3
+MP +D FAFTSLIS
Sbjct: 300 KMPDKDAFAFTSLIS 314
Score = 86.7 bits (213), Expect = 8e-15
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Frame = -3
Query: 773 LQHAYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRA 594
++ A LF +P R+ W+ MI + R AL LF + G P + L A
Sbjct: 190 VEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTA 249
Query: 593 CADLCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITW 414
C+ L L G HA + G E + L+ +YA C C++ +F+ ++D +
Sbjct: 250 CSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAF 309
Query: 413 TAVINGYVKSGKVEVARELFDEMPKK----NNVSWSVMINGYVQVGLFKEALDLFNDM-L 249
T++I+G G+ A +LF M + N V++ +++ ++GL E L +FN M +
Sbjct: 310 TSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSV 369
Query: 248 HCGFQP--NHSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGC 75
G +P H G +V L G G L++ + + V + ME D + AL++ G
Sbjct: 370 VYGIEPGVQHYGCMVDL--LGRAGLLEEAKRL---VREMPMEPDSYVLGALLNSCRVHGD 424
Query: 74 IELAYRVFEEMPYR 33
+EL E + R
Sbjct: 425 VELGKETVESLVER 438
>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 491
Score = 394 bits (1013), Expect = e-107
Identities = 184/317 (58%), Positives = 243/317 (76%), Gaps = 1/317 (0%)
Frame = -3
Query: 950 VASKYLKSSRKALSLLDQPCLTMSHINQIHAHLIGSGSISDPFAAGKLLFSCTVSTHA-D 774
++S Y+K+S+K L LLD+ C T+S I QI HL SG++ DP+AA K++ C +S++
Sbjct: 2 LSSTYVKASKKTLFLLDK-CRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFS 60
Query: 773 LQHAYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRA 594
L HAY LF + HRST+IWNT+IRAF E+++ R A+ LFK M FLP N+T+SF+ +A
Sbjct: 61 LSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKA 120
Query: 593 CADLCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITW 414
C DL L LGL CH +IKLGWE YDFVQNGL+H++A+ C+D R+LFD SSNRDVITW
Sbjct: 121 CTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITW 180
Query: 413 TAVINGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQ 234
TA+INGYV++G+V + RELFD+MP++N+VSWS MI GYV+VG F+EAL+LFN ML GF
Sbjct: 181 TALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFW 240
Query: 233 PNHSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGCIELAYRV 54
PNH+GIV ++AC LGALDQGRWIH Y+ + +M+LD ++G AL+DMYAKCGCIE+A +
Sbjct: 241 PNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSI 300
Query: 53 FEEMPYRDVFAFTSLIS 3
F E+ RDV +T LIS
Sbjct: 301 FGELRNRDVHVYTCLIS 317
Score = 79.7 bits (195), Expect = 9e-13
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Frame = -3
Query: 755 LFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACADLCQ 576
LF +P R++ W+ MI + AL LF M GF P + + ACA L
Sbjct: 199 LFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGA 258
Query: 575 LKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTAVING 396
L G W IH Y N +D D + A+I+
Sbjct: 259 LDQGR----------W----------IHCYIKRNRMDL-----------DRVMGAALIDM 287
Query: 395 YVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQPNHSGI 216
Y K G +E+A +F E+ ++ ++ +I+G G A++LF M G PN
Sbjct: 288 YAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTF 347
Query: 215 VVGLSACGFLGALDQGRWI-----HAYVDKKKMELDGILGTALVDMYAKCGCIELAYRVF 51
V L+AC +G +D+G I Y D+ +++ G LVD+ + G +E A ++
Sbjct: 348 VSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYG----CLVDLLGRAGKLEEAKKLV 403
Query: 50 EEMPYR-DVFAFTSLIS 3
+EMP + D + +L++
Sbjct: 404 KEMPMKPDSYVLGALLN 420
>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
predicted protein [Populus trichocarpa]
Length = 540
Score = 365 bits (936), Expect = 1e-98
Identities = 176/316 (55%), Positives = 232/316 (73%), Gaps = 1/316 (0%)
Frame = -3
Query: 947 ASKYLKSSRKALSLLDQPCLTMSHINQIHAHLIGSGSISDPFAAGKLL-FSCTVSTHADL 771
AS+YLK+S+K +SLLDQ LT+S + QI +HL + ++ DP+AA K++ + + L
Sbjct: 3 ASRYLKASKKTISLLDQKGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSL 62
Query: 770 QHAYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRAC 591
+A LF + ++ST+IWNTM++AF E++++ A SL+K M +LP N TFSFV+RAC
Sbjct: 63 FYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRAC 122
Query: 590 ADLCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWT 411
D+ L++GL H +K GWESYDFVQNGLIHLYA C +D R +FD S RDV+TWT
Sbjct: 123 IDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWT 182
Query: 410 AVINGYVKSGKVEVARELFDEMPKKNNVSWSVMINGYVQVGLFKEALDLFNDMLHCGFQP 231
+I+GY+ SG+V +ARELFD MP+KN VSW +I GYV++G FKEAL++F DM GF+
Sbjct: 183 CLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRL 242
Query: 230 NHSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGCIELAYRVF 51
N + IV L+AC FLGALDQGRWIHAYV + M LD +LGTAL+DMYAKCGCIE+A VF
Sbjct: 243 NRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVF 302
Query: 50 EEMPYRDVFAFTSLIS 3
+EM RDV+AFT LIS
Sbjct: 303 DEMDDRDVYAFTCLIS 318
Score = 77.0 bits (188), Expect = 6e-12
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 7/251 (2%)
Frame = -3
Query: 764 AYTLFRSIPHRSTYIWNTMIRAFGEQDKSRHALSLFKRMFSCGFLPTNHTFSFVLRACAD 585
A LF +P ++ W +I + + AL +F M GF + L ACA
Sbjct: 197 ARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAF 256
Query: 584 LCQLKLGLVCHALAIKLGWESYDFVQNGLIHLYAVCNCLDCCRRLFDSSSNRDVITWTAV 405
L L G HA + + LI +YA C C++ +FD +RDV +T +
Sbjct: 257 LGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCL 316
Query: 404 INGYVKSGKVEVARELFDEMPKK----NNVSWSVMINGYVQVGLFKEALDLFNDMLH--- 246
I+G K E A +LF+ M + N V++ ++N ++G+ E L +F M +
Sbjct: 317 ISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYV 376
Query: 245 CGFQPNHSGIVVGLSACGFLGALDQGRWIHAYVDKKKMELDGILGTALVDMYAKCGCIEL 66
Q H G +V L G G +++ + + V + ++ D AL+D G ++L
Sbjct: 377 IEPQIQHYGCLVDL--LGRAGKIEEAKQV---VREMPLQPDSYTLGALLDACRVHGDVQL 431
Query: 65 AYRVFEEMPYR 33
+ + + R
Sbjct: 432 GEEMVDSLVQR 442