BLASTX nr result

ID: Atractylodes21_contig00007865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007865
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago tr...   120   2e-25
emb|CBI19072.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vin...   112   2e-23
ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glyc...   108   3e-22
ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>ref|XP_003601098.1| Holocarboxylase synthetase hcs2 [Medicago truncatula]
           gi|355490146|gb|AES71349.1| Holocarboxylase synthetase
           hcs2 [Medicago truncatula]
          Length = 361

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/78 (70%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
 Frame = -3

Query: 231 VGLNVDNDKPTTSLNASLRKLNCG-YQLQREDITSAFFNKFEYFFHILINQGFQPLEKLY 55
           +GLNV+N+KPTTSLN  LR+L+ G YQ QRED+ +AFFNKFE FF + +NQGFQ LE+LY
Sbjct: 234 IGLNVNNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEKFFDLFLNQGFQTLEELY 293

Query: 54  YKTWLHSGQRIVVQEKSE 1
           YKTWLHSGQR++VQEK+E
Sbjct: 294 YKTWLHSGQRVIVQEKNE 311


>emb|CBI19072.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -3

Query: 231 VGLNVDNDKPTTSLNASLRKLNC-GYQLQREDITSAFFNKFEYFFHILINQGFQPLEKLY 55
           +GLNVDN+KPTT LNA LR+L+   YQ +REDI +AFFNKFE FF + INQGFQ LE+LY
Sbjct: 289 IGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAAFFNKFETFFSLFINQGFQTLEELY 348

Query: 54  YKTWLHSGQRIVVQEKSE 1
            KTWLHSGQR++VQE  E
Sbjct: 349 CKTWLHSGQRVIVQENIE 366


>ref|XP_002285834.1| PREDICTED: biotin--protein ligase [Vitis vinifera]
          Length = 327

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/78 (69%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -3

Query: 231 VGLNVDNDKPTTSLNASLRKLNC-GYQLQREDITSAFFNKFEYFFHILINQGFQPLEKLY 55
           +GLNVDN+KPTT LNA LR+L+   YQ +REDI +AFFNKFE FF + INQGFQ LE+LY
Sbjct: 200 IGLNVDNEKPTTCLNAVLRELSSVAYQFRREDIVAAFFNKFETFFSLFINQGFQTLEELY 259

Query: 54  YKTWLHSGQRIVVQEKSE 1
            KTWLHSGQR++VQE  E
Sbjct: 260 CKTWLHSGQRVIVQENIE 277


>ref|XP_003523464.1| PREDICTED: biotin--protein ligase-like [Glycine max]
          Length = 361

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/78 (65%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 231 VGLNVDNDKPTTSLNASLRKLNCG-YQLQREDITSAFFNKFEYFFHILINQGFQPLEKLY 55
           +GLNV+N KPTTSLN  L+    G YQ QRE++ +AFFNKFE F+ + +NQGFQ LE+LY
Sbjct: 234 IGLNVNNKKPTTSLNTILKGFYSGAYQFQREEVLAAFFNKFEIFYDLFLNQGFQTLEELY 293

Query: 54  YKTWLHSGQRIVVQEKSE 1
            KTWLHSGQR+VVQEK+E
Sbjct: 294 IKTWLHSGQRVVVQEKNE 311


>ref|XP_002301010.1| predicted protein [Populus trichocarpa] gi|222842736|gb|EEE80283.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
 Frame = -3

Query: 231 VGLNVDNDKPTTSLNASLRKLNCGY-QLQREDITSAFFNKFEYFFHILINQGFQPLEKLY 55
           +GLNVDN+KPTT LNA LR+L+     L+REDI +AF NKFE F+ + IN GFQ LE+LY
Sbjct: 206 IGLNVDNEKPTTCLNAVLRELSAAACTLRREDIVAAFLNKFENFYDLFINGGFQTLEELY 265

Query: 54  YKTWLHSGQRIVVQEKSE 1
           YKTWLHSGQR+++QEK+E
Sbjct: 266 YKTWLHSGQRVIIQEKNE 283


Top