BLASTX nr result
ID: Atractylodes21_contig00007715
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00007715
(1676 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcr... 93 6e-28
emb|CBI37506.3| unnamed protein product [Vitis vinifera] 93 6e-28
ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcr... 82 3e-27
ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcr... 81 1e-26
ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-26
>ref|XP_002263973.2| PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Vitis vinifera]
Length = 636
Score = 92.8 bits (229), Expect(2) = 6e-28
Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Frame = +2
Query: 1187 VCLPSIVDEFLRQAKAARLFHVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKS 1357
VCLPSIV+EFLRQAKAARLF V TF+F ESELS+AFGG+ERLD FFPFDP LLKK
Sbjct: 476 VCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKC 535
Query: 1358 DR 1363
DR
Sbjct: 536 DR 537
Score = 59.7 bits (143), Expect(2) = 6e-28
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = +3
Query: 1020 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEV 1142
AIMYVLCFRMRS++ +P L++QL +P+E ILKH L+PL+V
Sbjct: 436 AIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKV 476
Score = 71.2 bits (173), Expect(2) = 1e-18
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 157 FQSTILNAYKSKSTQFVMFYACSLDPENCGTQFVSTLVDIFKSSTHP 297
FQ+T+LNA+KSK QFVMFYAC+LDPENCG +F L D F ST P
Sbjct: 328 FQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFP 374
Score = 49.7 bits (117), Expect(2) = 1e-18
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +2
Query: 26 KSSLGKRSCSEVG*LDELMVLTFEHLQSCSGSGRLAEVFETLLHS 160
+ SLG +E LD LMVLTFEHL+SC GRL EVFETL+ S
Sbjct: 285 RKSLGGNLIAEK--LDSLMVLTFEHLESCEAGGRLIEVFETLVLS 327
>emb|CBI37506.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 92.8 bits (229), Expect(2) = 6e-28
Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 3/62 (4%)
Frame = +2
Query: 1187 VCLPSIVDEFLRQAKAARLFHVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKS 1357
VCLPSIV+EFLRQAKAARLF V TF+F ESELS+AFGG+ERLD FFPFDP LLKK
Sbjct: 467 VCLPSIVEEFLRQAKAARLFTVSETFIFSDLLESELSRAFGGIERLDMFFPFDPCLLKKC 526
Query: 1358 DR 1363
DR
Sbjct: 527 DR 528
Score = 59.7 bits (143), Expect(2) = 6e-28
Identities = 26/41 (63%), Positives = 35/41 (85%)
Frame = +3
Query: 1020 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEV 1142
AIMYVLCFRMRS++ +P L++QL +P+E ILKH L+PL+V
Sbjct: 427 AIMYVLCFRMRSMMNVPHLRSQLLLLPLETILKHPLSPLKV 467
Score = 71.2 bits (173), Expect(2) = 1e-18
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +1
Query: 157 FQSTILNAYKSKSTQFVMFYACSLDPENCGTQFVSTLVDIFKSSTHP 297
FQ+T+LNA+KSK QFVMFYAC+LDPENCG +F L D F ST P
Sbjct: 319 FQTTVLNAFKSKFAQFVMFYACALDPENCGVRFARVLADFFVCSTFP 365
Score = 49.7 bits (117), Expect(2) = 1e-18
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +2
Query: 26 KSSLGKRSCSEVG*LDELMVLTFEHLQSCSGSGRLAEVFETLLHS 160
+ SLG +E LD LMVLTFEHL+SC GRL EVFETL+ S
Sbjct: 276 RKSLGGNLIAEK--LDSLMVLTFEHLESCEAGGRLIEVFETLVLS 318
>ref|XP_003547884.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Glycine max]
Length = 627
Score = 82.4 bits (202), Expect(2) = 3e-27
Identities = 42/61 (68%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
Frame = +2
Query: 1187 VCLPSIVDEFLRQAKAARLFHVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKS 1357
VCLP++V EFLRQAKAA+LF +FVF ES+LSKAFGG++RLD FFPFDP LLKKS
Sbjct: 466 VCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKS 525
Query: 1358 D 1360
+
Sbjct: 526 E 526
Score = 67.8 bits (164), Expect(2) = 3e-27
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 1020 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEV 1142
AIMY+LCFRMRS++ IPRLK QL +MP+EAILKH+L+PL+V
Sbjct: 426 AIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKV 466
Score = 68.2 bits (165), Expect(2) = 1e-16
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 157 FQSTILNAYKSKSTQFVMFYACSLDPENCGTQFVSTLVDIFKSSTHP 297
FQ T+LNAYKSK TQ+VMFYAC+LDPE CG +F L D+F +P
Sbjct: 318 FQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNP 364
Score = 46.2 bits (108), Expect(2) = 1e-16
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2
Query: 68 LDELMVLTFEHLQSCSGSGRLAEVFETLLHS 160
LD LMVL F HL+SC SGRL EVF+TLL S
Sbjct: 287 LDSLMVLAFLHLESCQSSGRLTEVFDTLLAS 317
>ref|XP_003534228.1| PREDICTED: RNA polymerase I-specific transcription initiation factor
RRN3-like [Glycine max]
Length = 628
Score = 81.3 bits (199), Expect(2) = 1e-26
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 3/61 (4%)
Frame = +2
Query: 1187 VCLPSIVDEFLRQAKAARLFHVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKS 1357
VCLP++V EFLRQAKAA+LF +FVF ES+LSKAFGG++RLD FFPFDP LLK+S
Sbjct: 466 VCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGMDRLDMFFPFDPCLLKRS 525
Query: 1358 D 1360
+
Sbjct: 526 E 526
Score = 66.6 bits (161), Expect(2) = 1e-26
Identities = 28/41 (68%), Positives = 38/41 (92%)
Frame = +3
Query: 1020 AIMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEV 1142
AIMY++CFRMRS++ +PRLK QL +MP+EAILKH+L+PL+V
Sbjct: 426 AIMYIMCFRMRSLMDVPRLKLQLLNMPMEAILKHKLSPLKV 466
Score = 69.7 bits (169), Expect(2) = 2e-17
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1
Query: 157 FQSTILNAYKSKSTQFVMFYACSLDPENCGTQFVSTLVDIFKSSTHP 297
FQ T+LNAYKSK TQFVMFYAC+LDPE CG +F L D+F +P
Sbjct: 318 FQRTVLNAYKSKFTQFVMFYACALDPEGCGVKFAMVLADMFGGDANP 364
Score = 47.0 bits (110), Expect(2) = 2e-17
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +2
Query: 68 LDELMVLTFEHLQSCSGSGRLAEVFETLLHS 160
LD LMVL F HL+SC SGRLAEVF TLL S
Sbjct: 287 LDSLMVLAFLHLESCQNSGRLAEVFNTLLAS 317
>ref|XP_002307198.1| predicted protein [Populus trichocarpa] gi|222856647|gb|EEE94194.1|
predicted protein [Populus trichocarpa]
Length = 635
Score = 84.7 bits (208), Expect(2) = 5e-26
Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 3/62 (4%)
Frame = +2
Query: 1187 VCLPSIVDEFLRQAKAARLFHVLGTFVFH---ESELSKAFGGLERLDSFFPFDPYLLKKS 1357
VCLPSIV+EFL+QAKAA LF + F+F ES+LS+ FGGLERLD FFPFDP LLKK
Sbjct: 478 VCLPSIVNEFLKQAKAAHLFTISKAFIFEDLLESDLSRDFGGLERLDMFFPFDPCLLKKC 537
Query: 1358 DR 1363
DR
Sbjct: 538 DR 539
Score = 61.2 bits (147), Expect(2) = 5e-26
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 1023 IMYVLCFRMRSILGIPRLKAQLFDMPIEAILKHRLNPLEV 1142
IMYVLCF M+SI+ +P LK+QL MPIE ILKH+L PLEV
Sbjct: 439 IMYVLCFHMKSIMNVPTLKSQLLLMPIEPILKHKLGPLEV 478
Score = 71.6 bits (174), Expect(2) = 3e-16
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +1
Query: 151 SPFQSTILNAYKSKSTQFVMFYACSLDPENCGTQFVSTLVDIFKSSTHP 297
S F +TILN YKSK +QF +FYAC+LDPENCG +F TLVD+F S+ +P
Sbjct: 328 SSFMATILNTYKSKFSQFTIFYACALDPENCGVKFAQTLVDLFISTCNP 376
Score = 41.2 bits (95), Expect(2) = 3e-16
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 32 SLGKRSCSEVG*LDELMVLTFEHLQSCSGSGRLAEVFETLLHS 160
+LGK +++ LD LM+ EHL++C+ RL+EVFETLL S
Sbjct: 289 NLGKNVTADL--LDSLMIQFLEHLEACADKKRLSEVFETLLSS 329