BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007679
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|1...    83   2e-14
ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II su...    83   3e-14
ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II su...    80   1e-13
ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycin...    80   2e-13
ref|NP_190777.1| DNA-directed RNA polymerase II subunit RPB11 [A...    80   2e-13

>ref|XP_002313254.1| predicted protein [Populus trichocarpa] gi|118484276|gb|ABK94017.1|
           unknown [Populus trichocarpa]
           gi|222849662|gb|EEE87209.1| predicted protein [Populus
           trichocarpa]
          Length = 116

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/47 (85%), Positives = 43/47 (91%)
 Frame = -2

Query: 338 KIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKAAFEAEVARVSGEY 198
           KIIVR+HTTSQSSPMQAYNQAINDLDKELDHLK AFEAE+A   G+Y
Sbjct: 70  KIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAELANRPGQY 116


>ref|XP_004149719.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           [Cucumis sativus] gi|449516703|ref|XP_004165386.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB11-like [Cucumis sativus]
          Length = 116

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/47 (85%), Positives = 43/47 (91%)
 Frame = -2

Query: 338 KIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKAAFEAEVARVSGEY 198
           KIIVR+HTTSQSSPMQAYNQAINDLDKELDHLK AFEAE A+ S +Y
Sbjct: 70  KIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFEAEFAKFSRDY 116


>ref|XP_003534400.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Glycine
           max]
          Length = 116

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/47 (78%), Positives = 44/47 (93%)
 Frame = -2

Query: 338 KIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKAAFEAEVARVSGEY 198
           KIIVR+HTTSQSSPMQAYNQ+INDLD+ELDHLK+AFEAE+ + S +Y
Sbjct: 70  KIIVRIHTTSQSSPMQAYNQSINDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|NP_001240124.1| uncharacterized protein LOC100784219 [Glycine max]
           gi|255626235|gb|ACU13462.1| unknown [Glycine max]
          Length = 116

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/47 (76%), Positives = 44/47 (93%)
 Frame = -2

Query: 338 KIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKAAFEAEVARVSGEY 198
           KIIVR+HTTSQSSPMQAYNQ++NDLD+ELDHLK+AFEAE+ + S +Y
Sbjct: 70  KIIVRIHTTSQSSPMQAYNQSVNDLDRELDHLKSAFEAEMLKFSRDY 116


>ref|NP_190777.1| DNA-directed RNA polymerase II subunit RPB11 [Arabidopsis thaliana]
           gi|3219858|sp|Q38859.1|RPB11_ARATH RecName:
           Full=DNA-directed RNA polymerase II subunit RPB11;
           Short=RNA polymerase II subunit B11; AltName:
           Full=DNA-directed RNA polymerase II 13.6 kDa
           polypeptide; AltName: Full=DNA-directed RNA polymerase
           II subunit J gi|881501|gb|AAB02849.1| RNA polymerase II
           13.6 kDa subunit [Arabidopsis thaliana]
           gi|4678938|emb|CAB41329.1| DNA-directed RNA polymerase
           II 13.6K chain [Arabidopsis thaliana]
           gi|29029080|gb|AAO64919.1| At3g52090 [Arabidopsis
           thaliana] gi|332645368|gb|AEE78889.1| DNA-directed RNA
           polymerase II subunit RPB11 [Arabidopsis thaliana]
          Length = 116

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = -2

Query: 338 KIIVRVHTTSQSSPMQAYNQAINDLDKELDHLKAAFEAEVARVSGEY 198
           KIIVR+HTTSQSSPMQAYNQAINDLDKELD+LK  FEAEVA+ S ++
Sbjct: 70  KIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF 116