BLASTX nr result

ID: Atractylodes21_contig00007649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007649
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   159   6e-37
ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic...   158   8e-37
ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]...   157   2e-36
ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thalia...   155   7e-36
ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|1...   155   9e-36

>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  159 bits (401), Expect = 6e-37
 Identities = 79/123 (64%), Positives = 95/123 (77%), Gaps = 3/123 (2%)
 Frame = -3

Query: 550 EMSEERKRSPAGASFP---ADDRKXXXXXXXXXXXXSRKVVIKSADMKEEMQNEAVNIAI 380
           +MSE+ K++ AGA      +DD+K             +KV+IKSADM  +MQ EAV+IA+
Sbjct: 35  KMSEDAKKNIAGALTARPNSDDQKPSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIAV 94

Query: 379 SAFENCSVEKDVAEQIKKEFDKNHGPTWHCIVGKNYGSYVTHETNHFVYFYLESKAVLLF 200
           +AFE  +VEKDVAEQIKKEFDK HGPTWHCIVG+N+GSYVTHETNHFVYFYL+ KAVLLF
Sbjct: 95  AAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLF 154

Query: 199 KSG 191
           KSG
Sbjct: 155 KSG 157


>ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 122

 Score =  158 bits (400), Expect = 8e-37
 Identities = 79/122 (64%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
 Frame = -3

Query: 547 MSEERKRSPAGASFP---ADDRKXXXXXXXXXXXXSRKVVIKSADMKEEMQNEAVNIAIS 377
           MSE+ K++ AGA      +DD+K             +KV+IKSADM  +MQ EAV+IA++
Sbjct: 1   MSEDAKKNIAGALTARPNSDDQKLSPLPSPAPAVPPKKVIIKSADMIPDMQKEAVDIAVA 60

Query: 376 AFENCSVEKDVAEQIKKEFDKNHGPTWHCIVGKNYGSYVTHETNHFVYFYLESKAVLLFK 197
           AFE  +VEKDVAEQIKKEFDK HGPTWHCIVG+N+GSYVTHETNHFVYFYL+ KAVLLFK
Sbjct: 61  AFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFK 120

Query: 196 SG 191
           SG
Sbjct: 121 SG 122


>ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]
           gi|297316035|gb|EFH46458.1| At4g15930 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 123

 Score =  157 bits (396), Expect = 2e-36
 Identities = 77/123 (62%), Positives = 90/123 (73%), Gaps = 4/123 (3%)
 Frame = -3

Query: 547 MSEERKRSPAGASFPA----DDRKXXXXXXXXXXXXSRKVVIKSADMKEEMQNEAVNIAI 380
           MS+ R++       PA    DDR+             ++ VIKSADMK++MQ EA++IAI
Sbjct: 1   MSDGRRKKSVNGGAPAQTISDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIDIAI 60

Query: 379 SAFENCSVEKDVAEQIKKEFDKNHGPTWHCIVGKNYGSYVTHETNHFVYFYLESKAVLLF 200
           SAFE  SVEKD+AE IKKEFDK HG TWHCIVG+N+GSYVTHETNHFVYFYLE KAVLLF
Sbjct: 61  SAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLEQKAVLLF 120

Query: 199 KSG 191
           KSG
Sbjct: 121 KSG 123


>ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thaliana]
           gi|28466885|gb|AAO44051.1| At4g15930 [Arabidopsis
           thaliana] gi|332658267|gb|AEE83667.1| dynein light chain
           LC8-type [Arabidopsis thaliana]
          Length = 123

 Score =  155 bits (392), Expect = 7e-36
 Identities = 76/123 (61%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
 Frame = -3

Query: 547 MSEERKRSPAGASFPA----DDRKXXXXXXXXXXXXSRKVVIKSADMKEEMQNEAVNIAI 380
           MS+ R++       PA    DDR+             ++ VIKSADMK++MQ EA+ IAI
Sbjct: 1   MSDGRRKKSVNGGAPAQTILDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAI 60

Query: 379 SAFENCSVEKDVAEQIKKEFDKNHGPTWHCIVGKNYGSYVTHETNHFVYFYLESKAVLLF 200
           SAFE  SVEKD+AE IKKEFDK HG TWHCIVG+N+GSYVTHETNHFVYFYL+ KAVLLF
Sbjct: 61  SAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLF 120

Query: 199 KSG 191
           KSG
Sbjct: 121 KSG 123


>ref|XP_002328627.1| predicted protein [Populus trichocarpa] gi|118482080|gb|ABK92971.1|
           unknown [Populus trichocarpa]
           gi|222838609|gb|EEE76974.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  155 bits (391), Expect = 9e-36
 Identities = 75/118 (63%), Positives = 89/118 (75%)
 Frame = -3

Query: 544 SEERKRSPAGASFPADDRKXXXXXXXXXXXXSRKVVIKSADMKEEMQNEAVNIAISAFEN 365
           SE+ KRS  G     +D               +K++IK+ADMK++MQ EAV+IAI+AFE 
Sbjct: 3   SEDMKRSITGGVKVENDSYYRKSSPAAAAPPGKKIIIKNADMKDDMQKEAVDIAIAAFER 62

Query: 364 CSVEKDVAEQIKKEFDKNHGPTWHCIVGKNYGSYVTHETNHFVYFYLESKAVLLFKSG 191
            +VEKDVAE IKKEFDK HGPTWHCIVG+N+GSYVTHETNHFVYFYL+ KAVLLFKSG
Sbjct: 63  NNVEKDVAEHIKKEFDKKHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 120


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