BLASTX nr result

ID: Atractylodes21_contig00007641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007641
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   161   4e-51
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   207   7e-51
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   161   1e-47
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                179   1e-42
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                177   8e-42

>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  161 bits (408), Expect(3) = 4e-51
 Identities = 82/145 (56%), Positives = 109/145 (75%)
 Frame = -3

Query: 657  VLERYNGVFQDMSGLPPKRHIVHRIELRGTGDPISV*PYRYPHHHKDEIEKHVKEMLQQG 478
            VL  ++ VF   + LPP R   H I L+     ISV PYRYPH+ K  +E+ V EML+ G
Sbjct: 1754 VLAEFDQVFALPTALPPFRGKNHAINLKPGVTAISVRPYRYPHNTKVVMEQMVCEMLEAG 1813

Query: 477  IIRHNSSAFSSPIILVKKKKNGSWRMCVDHREHNKATVPDKYPIPVVEELLDELNGASYF 298
            IIR ++S FSSP++LVKKK +GSWR C+D+R  NKAT+PDK+PIPV+++LLDEL GAS F
Sbjct: 1814 IIRESTSPFSSPVLLVKKK-DGSWRFCIDYRALNKATIPDKFPIPVIDQLLDELYGASVF 1872

Query: 297  *KLDLKAGYHQIRVKEEEVCKTVFQ 223
             KLDL++GYHQIR++EE++ KT F+
Sbjct: 1873 SKLDLRSGYHQIRMQEEDIPKTAFR 1897



 Score = 64.7 bits (156), Expect(3) = 4e-51
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = -2

Query: 1153 TLRIKGVIKGVPVEVLVDSEASHNFVSPQVAATLELPMNFGKSLGVCLGDGHRVLKLGEC 974
            T ++ G I+   V V++DS ASHNF++P +   L+L +    S  + LG+G  V  LG C
Sbjct: 1585 TTKLYGKIQKTDVIVMLDSGASHNFITPSIVTKLKLKVCAETSFDILLGNGASVNSLGVC 1644

Query: 973  KGVEIQFGTFQTVMDAYVLELGNLDMILGVS*LQ 872
            + V  Q        D   LELG +D+ILG+  L+
Sbjct: 1645 REVSFQLADATFTSDFIALELGMVDVILGIQWLE 1678



 Score = 24.3 bits (51), Expect(3) = 4e-51
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 851  DWWERMISFQSEGKKVNFTDGPSRSTEK 768
            DW E+ +SF   G KV     PS  T K
Sbjct: 1686 DWKEQELSFIHGGVKVTLFGDPSLHTSK 1713


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  207 bits (526), Expect = 7e-51
 Identities = 99/152 (65%), Positives = 125/152 (82%)
 Frame = -3

Query: 678 QQ*ELSVVLERYNGVFQDMSGLPPKRHIVHRIELRGTGDPISV*PYRYPHHHKDEIEKHV 499
           Q  EL ++LE Y GVFQ+ +GLPPKR   H I L+     ++V PYRYPHHHK+EIEK V
Sbjct: 343 QSRELELLLENYGGVFQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEIEKQV 402

Query: 498 KEMLQQGIIRHNSSAFSSPIILVKKKKNGSWRMCVDHREHNKATVPDKYPIPVVEELLDE 319
           +EMLQ GIIRH++S+FSSP+ILVK+K N SWRMC+D+R  NKATVPDK+PIPV+EELLDE
Sbjct: 403 REMLQAGIIRHSTSSFSSPVILVKEKDN-SWRMCIDYRALNKATVPDKFPIPVIEELLDE 461

Query: 318 LNGASYF*KLDLKAGYHQIRVKEEEVCKTVFQ 223
           L+GA ++ KLDLK+GYHQ+RVKEE++ KT F+
Sbjct: 462 LHGARFYSKLDLKSGYHQVRVKEEDIHKTAFR 493



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 36/97 (37%), Positives = 58/97 (59%)
 Frame = -2

Query: 1162 KTNTLRIKGVIKGVPVEVLVDSEASHNFVSPQVAATLELPMNFGKSLGVCLGDGHRVLKL 983
            +  ++++ GVIK VPV VLVDS A+HNF+S Q+   +   +     + + LGDG      
Sbjct: 175  RPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLVHKMNWAVVDTPCMSIKLGDGSYSKTK 234

Query: 982  GECKGVEIQFGTFQTVMDAYVLELGNLDMILGVS*LQ 872
            G C+G+E+  G     +DA + +LG +DM+LG+  L+
Sbjct: 235  GTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLGIEWLR 271


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  161 bits (408), Expect(2) = 1e-47
 Identities = 85/160 (53%), Positives = 111/160 (69%)
 Frame = -3

Query: 702  KRQNLNE*QQ*ELSVVLERYNGVFQDMSGLPPKRHIVHRIELRGTGDPISV*PYRYPHHH 523
            K+Q      Q  +  +L++Y GVFQ    LPP R+  H I L+    P+++ PYRY    
Sbjct: 668  KKQEEQTALQPAIQRLLDQYQGVFQTPQLLPPVRNREHAITLQEGSSPVNIRPYRYSFAQ 727

Query: 522  KDEIEKHVKEMLQQGIIRHNSSAFSSPIILVKKKKNGSWRMCVDHREHNKATVPDKYPIP 343
            K+EIEK V+EML   IIR + S +SSP++LVKKK +G WR CVD+R  N+AT+PDKYPIP
Sbjct: 728  KNEIEKLVREMLNAQIIRPSVSPYSSPVLLVKKK-DGGWRFCVDYRALNEATIPDKYPIP 786

Query: 342  VVEELLDELNGASYF*KLDLKAGYHQIRVKEEEVCKTVFQ 223
            V+EELLDEL GA+ F KLDLK+GY QIR+K  +V KT F+
Sbjct: 787  VIEELLDELKGATVFSKLDLKSGYFQIRMKLSDVEKTAFK 826



 Score = 56.2 bits (134), Expect(2) = 1e-47
 Identities = 41/149 (27%), Positives = 74/149 (49%)
 Frame = -2

Query: 1168 QKKTNTLRIKGVIKGVPVEVLVDSEASHNFVSPQVAATLELPMNFGKSLGVCLGDGHRVL 989
            + +  +++++G I    V +LVDS A+ NF+S  +       +   +S GV +G G  + 
Sbjct: 507  ESQEQSMKMRGYIGNTKVVLLVDSGATCNFISEALVREKGWLVTQTRSFGVKVGGGRIIK 566

Query: 988  KLGECKGVEIQFGTFQTVMDAYVLELGNLDMILGVS*LQNRKK*PSIGGRE*SVSSRKGR 809
              G+C  + ++    + V D Y+ +LG+LD++LG S L    +      R+  +S + GR
Sbjct: 567  SSGKCVDIPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGLGE-TRANWRDLRISWQIGR 625

Query: 808  R*ILLMVRHVALKNGRVGERSLGIFPKYT 722
              + L      L  G++  RS+    KYT
Sbjct: 626  TWVSL-YGDPDLCRGQISMRSMERVIKYT 653


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  179 bits (455), Expect = 1e-42
 Identities = 96/183 (52%), Positives = 126/183 (68%), Gaps = 4/183 (2%)
 Frame = -3

Query: 759 WGKGVWAS---FQSILWKEESLKRQNLNE*QQ*E-LSVVLERYNGVFQDMSGLPPKRHIV 592
           WGK    S   +Q IL + E  + +   E +  E +  +LE Y  VFQ+  GLPP+R   
Sbjct: 366 WGKEHICSMKNYQLILMEVEEDEEEEKTEAEVPEGMRKILEEYPEVFQEPKGLPPRRTTD 425

Query: 591 HRIELRGTGDPISV*PYRYPHHHKDEIEKHVKEMLQQGIIRHNSSAFSSPIILVKKKKNG 412
           H I+L+      ++ PYRYP + K+EIEK VKEML  GIIRH++S FSSP ILVKKK +G
Sbjct: 426 HAIQLQEGASIPNIRPYRYPFYQKNEIEKLVKEMLNSGIIRHSTSPFSSPAILVKKK-DG 484

Query: 411 SWRMCVDHREHNKATVPDKYPIPVVEELLDELNGASYF*KLDLKAGYHQIRVKEEEVCKT 232
            WR CVD+R  NKAT+PDK+PIP+++ELLDE+  A  F KLDLK+GYHQIR+KEE++ KT
Sbjct: 485 GWRFCVDYRALNKATIPDKFPIPIIDELLDEIGAAVVFSKLDLKSGYHQIRMKEEDIPKT 544

Query: 231 VFQ 223
            F+
Sbjct: 545 AFR 547


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  177 bits (448), Expect = 8e-42
 Identities = 86/145 (59%), Positives = 110/145 (75%)
 Frame = -3

Query: 657  VLERYNGVFQDMSGLPPKRHIVHRIELRGTGDPISV*PYRYPHHHKDEIEKHVKEMLQQG 478
            +LE Y  VFQ+  GLPP+R   H I+L+      ++ PYRYP + K+EIEK VKEML  G
Sbjct: 593  ILEEYPEVFQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEKLVKEMLNSG 652

Query: 477  IIRHNSSAFSSPIILVKKKKNGSWRMCVDHREHNKATVPDKYPIPVVEELLDELNGASYF 298
            IIRH++S FSSP ILVKKK +G WR CVD+R  NKAT+PDK+PIP+++ELLDE+  A  F
Sbjct: 653  IIRHSTSPFSSPAILVKKK-DGGWRFCVDYRALNKATIPDKFPIPIIDELLDEIGAAVVF 711

Query: 297  *KLDLKAGYHQIRVKEEEVCKTVFQ 223
             KLDLK+GYHQIR+KEE++ KT F+
Sbjct: 712  SKLDLKSGYHQIRMKEEDIPKTAFR 736


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