BLASTX nr result

ID: Atractylodes21_contig00007406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007406
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   546   e-153
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              546   e-153
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   535   e-150
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   535   e-149
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   519   e-145

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  546 bits (1407), Expect = e-153
 Identities = 274/364 (75%), Positives = 305/364 (83%), Gaps = 19/364 (5%)
 Frame = +3

Query: 48   GDELNSSFRNLMVFGGGR---------VRLEWKDIPMELLLRIVSQLDDRMVIVASAVCS 200
            G+EL   F  L++ G GR         V  EWKD+PMELLLRIV+ +DDR VI+AS VCS
Sbjct: 8    GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCS 67

Query: 201  GWRDAICRGLTHFSLSWCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNC 380
            GWRDAIC GLTH SLSWCKNNMN+LV+SLAPKFT+L+ L LRQDKPQL D AVE IAN C
Sbjct: 68   GWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYC 127

Query: 381  HDLEDLDLSKSFRLGDRSLYALAHGCPNLIKLNISGCSAFSDTALAYLAGFCRKLRILNL 560
            HDL+DLDLSKSF+L D SLYALAHGCPNL KLNISGC+AFSD ALA+L  FCR+L+ILNL
Sbjct: 128  HDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRRLKILNL 187

Query: 561  CGCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMSLAYGCPDLRALDLCGCVLIT 740
            CGC KAAS++AL+AIG NCS+LQSLNLGWCE+V DAGVMSLAYGCPDLRALDLCGCV IT
Sbjct: 188  CGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDLCGCVHIT 247

Query: 741  DESVIALANNCLHLRSLGLYYCQNITDSAMYALAHSR-----DVWSS--SRYEEDDGLRS 899
            DESVIALAN CLHLRSLGLY+CQNITD AMY+LA SR     ++W S  SRY E +GL +
Sbjct: 248  DESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYSE-EGLMN 306

Query: 900  LNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQSHR---QLS 1070
            LNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCAC  Q+HR   QLS
Sbjct: 307  LNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHRTASQLS 366

Query: 1071 HPAH 1082
            HPAH
Sbjct: 367  HPAH 370


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  546 bits (1407), Expect = e-153
 Identities = 274/364 (75%), Positives = 305/364 (83%), Gaps = 19/364 (5%)
 Frame = +3

Query: 48   GDELNSSFRNLMVFGGGR---------VRLEWKDIPMELLLRIVSQLDDRMVIVASAVCS 200
            G+EL   F  L++ G GR         V  EWKD+PMELLLRIV+ +DDR VI+AS VCS
Sbjct: 66   GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVIMASGVCS 125

Query: 201  GWRDAICRGLTHFSLSWCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNC 380
            GWRDAIC GLTH SLSWCKNNMN+LV+SLAPKFT+L+ L LRQDKPQL D AVE IAN C
Sbjct: 126  GWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAVEIIANYC 185

Query: 381  HDLEDLDLSKSFRLGDRSLYALAHGCPNLIKLNISGCSAFSDTALAYLAGFCRKLRILNL 560
            HDL+DLDLSKSF+L D SLYALAHGCPNL KLNISGC+AFSD ALA+L  FCR+L+ILNL
Sbjct: 186  HDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCRRLKILNL 245

Query: 561  CGCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMSLAYGCPDLRALDLCGCVLIT 740
            CGC KAAS++AL+AIG NCS+LQSLNLGWCE+V DAGVMSLAYGCPDLRALDLCGCV IT
Sbjct: 246  CGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDLCGCVHIT 305

Query: 741  DESVIALANNCLHLRSLGLYYCQNITDSAMYALAHSR-----DVWSS--SRYEEDDGLRS 899
            DESVIALAN CLHLRSLGLY+CQNITD AMY+LA SR     ++W S  SRY E +GL +
Sbjct: 306  DESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYSE-EGLMN 364

Query: 900  LNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQSHR---QLS 1070
            LNISQCTALTPPAVQA+CDS PALHTCPGRHSLIISGCL+LTSVHCAC  Q+HR   QLS
Sbjct: 365  LNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHRTASQLS 424

Query: 1071 HPAH 1082
            HPAH
Sbjct: 425  HPAH 428


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  535 bits (1379), Expect = e-150
 Identities = 261/360 (72%), Positives = 296/360 (82%), Gaps = 10/360 (2%)
 Frame = +3

Query: 33   EGFMEGDELNSSFRNLMVFG-GGRVRLEWKDIPMELLLRIVSQLDDRMVIVASAVCSGWR 209
            EG    ++LN  F  LM+   GG V  EWKDIP+ELLLRIVS +DDR VI+AS VCSGWR
Sbjct: 4    EGKARSEDLNLCFEKLMMLAFGGAVITEWKDIPVELLLRIVSLVDDRTVIMASGVCSGWR 63

Query: 210  DAICRGLTHFSLSWCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDL 389
            DAIC GLTH  LSWCKNNMN+LV+SLAPKFT+L+ L+LRQDKPQL D+AVETIA+ CHDL
Sbjct: 64   DAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVETIASYCHDL 123

Query: 390  EDLDLSKSFRLGDRSLYALAHGCPNLIKLNISGCSAFSDTALAYLAGFCRKLRILNLCGC 569
            +DLDLSKSF+L D SLYALAHGCPNL KLNISGC+AFSD  L YL  FC+KL+ LNLCGC
Sbjct: 124  QDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFCQKLKFLNLCGC 183

Query: 570  VKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMSLAYGCPDLRALDLCGCVLITDES 749
            VK A+D+AL+ IG NCS+LQ+LNLGWCENVGD GVMSLAYGCPDLR LDLCGCV ITD+S
Sbjct: 184  VKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMSLAYGCPDLRTLDLCGCVCITDDS 243

Query: 750  VIALANNCLHLRSLGLYYCQNITDSAMYALAHSR-----DVWSSSRYE-EDDGLRSLNIS 911
            VIALAN C HLRSLGLYYC+NITD AMY+L H+R      +W S +   +++GL  LNIS
Sbjct: 244  VIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRCDEEGLSRLNIS 303

Query: 912  QCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQSHRQLS---HPAH 1082
            QCTALTPPAVQALCDS PALHTC GRHSL++SGCLNLTSVHC CA Q+HR  S   HPAH
Sbjct: 304  QCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAHRSASSFPHPAH 363


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 373

 Score =  535 bits (1377), Expect = e-149
 Identities = 266/369 (72%), Positives = 301/369 (81%), Gaps = 20/369 (5%)
 Frame = +3

Query: 36   GFMEGDELNSSFRNLMVFGG-----GRVRLE------WKDIPMELLLRIVSQLDDRMVIV 182
            G +  ++LN  F  LM+ G      GRV++E      WKDIPMELLLRIVS +DDR +I+
Sbjct: 5    GKLRSEDLNRCFEKLMMAGAAGNTEGRVKMEGVVITEWKDIPMELLLRIVSLVDDRTIIM 64

Query: 183  ASAVCSGWRDAICRGLTHFSLSWCKNNMNSLVVSLAPKFTELRVLILRQDKPQLVDNAVE 362
            AS VCSGWRDAIC GLTH  LSWCKN+MN+LV+ LAPKFT+L  L+LRQDKPQL DNAVE
Sbjct: 65   ASGVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLEDNAVE 124

Query: 363  TIANNCHDLEDLDLSKSFRLGDRSLYALAHGCPNLIKLNISGCSAFSDTALAYLAGFCRK 542
             IA  CHDLEDLDLSKSF+L D SLYALAHGCPNL KLNISGC++FSD  L YL GFCRK
Sbjct: 125  AIARYCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTGFCRK 184

Query: 543  LRILNLCGCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMSLAYGCPDLRALDLC 722
            L+ILNLCGCVKAA+D+AL+AIG NCS+LQSLNLGWCENVGD GVMSLAYGCPDLR LDLC
Sbjct: 185  LKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCPDLRTLDLC 244

Query: 723  GCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAHSR-----DVWSSSRYE-ED 884
            GCV ITD+SVIALA  CLHLRSLGLYYC+NITD AMY+L HSR      +W S +   ++
Sbjct: 245  GCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKGRCDE 304

Query: 885  DGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISGCLNLTSVHCACAFQSHRQ 1064
            +GLRSLNISQCTALTPPAVQALCD  PALHTC GRHSL++SGCLNLTSVHCACA Q+HR 
Sbjct: 305  EGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQAHRT 364

Query: 1065 ---LSHPAH 1082
               + +PAH
Sbjct: 365  FRFIPNPAH 373


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  519 bits (1336), Expect = e-145
 Identities = 254/339 (74%), Positives = 286/339 (84%), Gaps = 10/339 (2%)
 Frame = +3

Query: 96   GRVRLEWKDIPMELLLRIVSQLDDRMVIVASAVCSGWRDAICRGLTHFSLSWCKNNMNSL 275
            G V  EWKDIPM+LLLRIVS +DDR +I+AS VCSGWRDAIC GLTH  LSWCKNNMN+L
Sbjct: 21   GLVITEWKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNL 80

Query: 276  VVSLAPKFTELRVLILRQDKPQLVDNAVETIANNCHDLEDLDLSKSFRLGDRSLYALAHG 455
            V+SLAPKFT+L+ L+LRQDKPQL DNAVETIA+ CHDL+DLDLSKSF+L D SLYALAHG
Sbjct: 81   VLSLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHG 140

Query: 456  CPNLIKLNISGCSAFSDTALAYLAGFCRKLRILNLCGCVKAASDKALKAIGCNCSELQSL 635
             PNL KLNISGC+AFSD +L YL  FCRKL+ILNLCGCV  A+D+AL+AIG NCS+LQSL
Sbjct: 141  FPNLTKLNISGCTAFSDVSLEYLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSL 200

Query: 636  NLGWCENVGDAGVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNI 815
            NLGWCENV D GVMSLAYGCPD+R LDLCGCV ITD+SVIALAN C HLRSL LYYC+NI
Sbjct: 201  NLGWCENVSDVGVMSLAYGCPDIRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNI 260

Query: 816  TDSAMYALAHSR-----DVWSS--SRYEEDDGLRSLNISQCTALTPPAVQALCDSCPALH 974
            TD AMY+L H+R      +W S   RY+E +GL+SLNISQCTA+TPPAVQALCDS PALH
Sbjct: 261  TDRAMYSLVHNRVKNKPAMWESMKGRYDE-EGLKSLNISQCTAITPPAVQALCDSFPALH 319

Query: 975  TCPGRHSLIISGCLNLTSVHCACAFQSHRQLS---HPAH 1082
            TC GRHSL++SGC NLTSVHCACA Q+H   S   HPAH
Sbjct: 320  TCSGRHSLVMSGCWNLTSVHCACAVQAHHTASSIPHPAH 358


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