BLASTX nr result

ID: Atractylodes21_contig00007348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007348
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   295   1e-77
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   280   3e-73
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   278   1e-72
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              267   3e-69
ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like p...   260   5e-67

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  295 bits (756), Expect = 1e-77
 Identities = 142/186 (76%), Positives = 172/186 (92%)
 Frame = -2

Query: 558 MDSSNLEQTLQEGKLYRYVNNLIVAHLRDNNLTQAASAVASATMTPLNIEAPPNKLLELV 379
           M++S+LEQTLQ+GKL+R +N+LIVAHLRD++LTQA   +ASATMTPLN+EAPPNKLLELV
Sbjct: 1   MENSSLEQTLQDGKLHRQLNSLIVAHLRDSSLTQA---IASATMTPLNVEAPPNKLLELV 57

Query: 378 AKGLAVDKDETLRGISSSALFDSSTALPAAYGSIPASRAVAIDFSAAHDTKGSSKSFAKH 199
           AKGLA +KDE LRG++S+A++D  T LPAAYGSIPA RA ++DFSAA DTKGSSK+F+KH
Sbjct: 58  AKGLAAEKDEMLRGVTSTAMYDLGTLLPAAYGSIPAPRAASVDFSAAQDTKGSSKNFSKH 117

Query: 198 ETRHVSEHKNVARCARFSPDGRFLASGSADTSIKLFEVAKIKQMMLPEGRDGPVRPVVRT 19
           ETRH+SEHKN+ARCARFSPDGRF+A+GSADTSIKLFE++KIKQMML + RDGPVRPV+RT
Sbjct: 118 ETRHLSEHKNIARCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVRPVIRT 177

Query: 18  FYDHLQ 1
           FYDH+Q
Sbjct: 178 FYDHIQ 183


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  280 bits (717), Expect = 3e-73
 Identities = 140/185 (75%), Positives = 160/185 (86%), Gaps = 3/185 (1%)
 Frame = -2

Query: 546 NLEQTLQEGKLYRYVNNLIVAHLRDNNLTQAASAVASATMTPLNIEAPPNKLLELVAKGL 367
           NLEQTLQEGKLYR +N LIVA+LRD NLTQAASAVASATMTPLN++ PP KL++LVAKGL
Sbjct: 4   NLEQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVAKGL 63

Query: 366 AVDKDETLRG-ISSSALFDSSTALPAAYGSIPASRAVAIDFSAAHDTKGSSKSFAKHETR 190
           AV+KDE L+G + S+A  DS   +P  YGSIPA R VA+DF A HDTKGSSKSF KHETR
Sbjct: 64  AVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPRTVAVDFGAVHDTKGSSKSFPKHETR 123

Query: 189 HVSEHKNVARCARFSPDGRFLASGSADTSIKLFEVAKIKQMMLPEG--RDGPVRPVVRTF 16
           HVSEHKN+ARCARFS DGRF+A+GSAD SIKLFE++KIKQMMLP+   RDGPVRPV+RTF
Sbjct: 124 HVSEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVIRTF 183

Query: 15  YDHLQ 1
           YDH+Q
Sbjct: 184 YDHIQ 188


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  278 bits (712), Expect = 1e-72
 Identities = 135/182 (74%), Positives = 159/182 (87%)
 Frame = -2

Query: 546 NLEQTLQEGKLYRYVNNLIVAHLRDNNLTQAASAVASATMTPLNIEAPPNKLLELVAKGL 367
           + EQTLQ+G+LYR VN+LIVAHLRD+NLTQAASA ASATMTPLN++ PP KL+ELVAKGL
Sbjct: 4   SFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVAKGL 63

Query: 366 AVDKDETLRGISSSALFDSSTALPAAYGSIPASRAVAIDFSAAHDTKGSSKSFAKHETRH 187
           AV+KDETLRG  +SAL++  +++P  +GS   SR  AIDFS   DTKGSSK+F KHETRH
Sbjct: 64  AVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHETRH 123

Query: 186 VSEHKNVARCARFSPDGRFLASGSADTSIKLFEVAKIKQMMLPEGRDGPVRPVVRTFYDH 7
           +SEHKNVARCARFS DGRF+A+GSAD SIKLFEVAKIKQMMLP+ +DGPVRPV+RTFYDH
Sbjct: 124 LSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYDH 183

Query: 6   LQ 1
           +Q
Sbjct: 184 IQ 185


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  267 bits (683), Expect = 3e-69
 Identities = 144/211 (68%), Positives = 165/211 (78%), Gaps = 9/211 (4%)
 Frame = -2

Query: 606 SCFFGPKNPTSSIAKEMDS------SNLEQTLQEGKLYRYVNNLIVAHLRDNNLTQAASA 445
           S  F PK+  S    +MD        NLEQTLQEGKLYR +N LIVA+LRD NLTQAASA
Sbjct: 25  SLSFPPKSHLSD--SQMDELQRKMEPNLEQTLQEGKLYRQINALIVAYLRDYNLTQAASA 82

Query: 444 VASATMTPLNIEAPPNKLLELVAKGLAVDKDETLR-GISSSALFDSSTALPAAYGSIPAS 268
           VASATMTPLN++ PP KL++LVAKGLAV+KDE L+ G+ S+A  DS   +P  YGSIPA 
Sbjct: 83  VASATMTPLNVDTPPYKLIDLVAKGLAVEKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAP 142

Query: 267 RAVAIDFSAAHDTKGSSKSFAKHETRHVSEHKNVARCARFSPDGRFLASGSADTSIKLFE 88
           R    D  A HDTKGSSKSF KHETRHVSEHKN+ARCARFS DGRF+A+GSAD SIKLFE
Sbjct: 143 R-TGYDRFAVHDTKGSSKSFPKHETRHVSEHKNLARCARFSLDGRFVATGSADMSIKLFE 201

Query: 87  VAKIKQMMLPEG--RDGPVRPVVRTFYDHLQ 1
           ++KIKQMMLP+   RDGPVRPV+RTFYDH+Q
Sbjct: 202 ISKIKQMMLPDANTRDGPVRPVIRTFYDHIQ 232


>ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like protein [Medicago
           truncatula] gi|355484804|gb|AES66007.1| Cleavage
           stimulation factor subunit 1-like protein [Medicago
           truncatula]
          Length = 487

 Score =  260 bits (664), Expect = 5e-67
 Identities = 129/187 (68%), Positives = 156/187 (83%)
 Frame = -2

Query: 561 EMDSSNLEQTLQEGKLYRYVNNLIVAHLRDNNLTQAASAVASATMTPLNIEAPPNKLLEL 382
           E  SS  EQT+++GKLYR++N+LIVAHLR NNLTQAA+AVASATMTP N++APPNKLL+L
Sbjct: 2   ENSSSRSEQTVEDGKLYRHLNSLIVAHLRHNNLTQAATAVASATMTPFNVQAPPNKLLQL 61

Query: 381 VAKGLAVDKDETLRGISSSALFDSSTALPAAYGSIPASRAVAIDFSAAHDTKGSSKSFAK 202
           ++KGLA +KD+  RGISSS   D   +LP     +P   A  IDFS+  D KGSSKSF K
Sbjct: 62  LSKGLAAEKDDLPRGISSSPFQDLGASLP-----LPRPGATTIDFSSLSDIKGSSKSFPK 116

Query: 201 HETRHVSEHKNVARCARFSPDGRFLASGSADTSIKLFEVAKIKQMMLPEGRDGPVRPVVR 22
           HETRH+SEHKNVARCARFSPDGRF+A+GSADTSIKLFEV+KIKQM+LP+ +DGPVR VV+
Sbjct: 117 HETRHLSEHKNVARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVVK 176

Query: 21  TFYDHLQ 1
           T+YDH+Q
Sbjct: 177 TYYDHIQ 183


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