BLASTX nr result

ID: Atractylodes21_contig00007291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007291
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   162   9e-38
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   150   3e-34
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   150   3e-34
ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2...   146   5e-33
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32

>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 772

 Score =  162 bits (410), Expect = 9e-38
 Identities = 115/233 (49%), Positives = 131/233 (56%), Gaps = 3/233 (1%)
 Frame = +2

Query: 140 PSLEQLSRKIATPATPLHLPRSTDKTHFTSL--KTTSRLKHNXXXXXXXXXXXXXXXXXP 313
           PS+E  SRK  T +T L +P +TDK HF SL  ++ S   +                  P
Sbjct: 16  PSVELSSRK--TNSTTLSIP-TTDKPHFNSLVLQSCSLYNNKHGHGHGHSSFVTSAIAAP 72

Query: 314 NSFLSEKAFKGLGVFXXXXXXXXXXXXXXXXXXXXASIVDGTG-NVTDDDELAITKLGLP 490
           NS LSE+AFKGLG                          DG G ++ DDDELAI+KLGLP
Sbjct: 73  NSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYED----DGAGESLPDDDELAISKLGLP 128

Query: 491 QRLVQSLEKREITRLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIXXXXXXXXXXXX 670
           QRLV+SLEKR IT LFPIQRAVLVPALEGRD+IARAKTGTGKT                 
Sbjct: 129 QRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT----------------- 171

Query: 671 XXXXXXXXXXKTLAFGIPIIKRLTEDDEERISPRRAQRLPRVLVLAPTRELAR 829
                       LAFGIPIIK +TEDD+   S RR  RLPRVLVLAPTRELA+
Sbjct: 172 ------------LAFGIPIIKCITEDDKS--SQRRTGRLPRVLVLAPTRELAK 210


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score =  150 bits (379), Expect = 3e-34
 Identities = 92/173 (53%), Positives = 105/173 (60%)
 Frame = +2

Query: 311 PNSFLSEKAFKGLGVFXXXXXXXXXXXXXXXXXXXXASIVDGTGNVTDDDELAITKLGLP 490
           PNS LSE+AFKGLG F                    ++          +DELA+ +LGLP
Sbjct: 72  PNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASA-------AAQEDELALAQLGLP 124

Query: 491 QRLVQSLEKREITRLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIXXXXXXXXXXXX 670
            RLV+SLE+R IT LFPIQRAVLVPALEGRD+IARAKTGTGKT                 
Sbjct: 125 PRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT----------------- 167

Query: 671 XXXXXXXXXXKTLAFGIPIIKRLTEDDEERISPRRAQRLPRVLVLAPTRELAR 829
                       LAFGIPIIKRL+EDDE+R S RR+ RLPRVLVLAPTRELA+
Sbjct: 168 ------------LAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAK 208


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  150 bits (379), Expect = 3e-34
 Identities = 92/173 (53%), Positives = 105/173 (60%)
 Frame = +2

Query: 311 PNSFLSEKAFKGLGVFXXXXXXXXXXXXXXXXXXXXASIVDGTGNVTDDDELAITKLGLP 490
           PNS LSE+AFKGLG F                    ++          +DELA+ +LGLP
Sbjct: 72  PNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASA-------AAQEDELALAQLGLP 124

Query: 491 QRLVQSLEKREITRLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIXXXXXXXXXXXX 670
            RLV+SLE+R IT LFPIQRAVLVPALEGRD+IARAKTGTGKT                 
Sbjct: 125 PRLVESLEQRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKT----------------- 167

Query: 671 XXXXXXXXXXKTLAFGIPIIKRLTEDDEERISPRRAQRLPRVLVLAPTRELAR 829
                       LAFGIPIIKRL+EDDE+R S RR+ RLPRVLVLAPTRELA+
Sbjct: 168 ------------LAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELAK 208


>ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  146 bits (369), Expect = 5e-33
 Identities = 99/206 (48%), Positives = 111/206 (53%), Gaps = 2/206 (0%)
 Frame = +2

Query: 218 HFTSL--KTTSRLKHNXXXXXXXXXXXXXXXXXPNSFLSEKAFKGLGVFXXXXXXXXXXX 391
           HF SL  KT    KH+                 PN  LSE+AFKGL  F           
Sbjct: 17  HFNSLIAKTQLSFKHSLIINTNSTFTPPSAIATPNPILSEEAFKGLDGFSDFEADADTDD 76

Query: 392 XXXXXXXXXASIVDGTGNVTDDDELAITKLGLPQRLVQSLEKREITRLFPIQRAVLVPAL 571
                    +S  +   N T +DEL I+KLGLPQRLVQ+L+ R IT LFPIQRAVL+P L
Sbjct: 77  AVDYD----SSETEPNSN-TSEDELDISKLGLPQRLVQTLQNRGITHLFPIQRAVLIPTL 131

Query: 572 EGRDIIARAKTGTGKTLAFGIXXXXXXXXXXXXXXXXXXXXXXKTLAFGIPIIKRLTEDD 751
           EGRD+IARAKTGTGKT                             LAFGIPIIKRLTED 
Sbjct: 132 EGRDLIARAKTGTGKT-----------------------------LAFGIPIIKRLTEDA 162

Query: 752 EERISPRRAQRLPRVLVLAPTRELAR 829
           E R S RR  RLP+VLVLAPTRELA+
Sbjct: 163 ELRGSQRRTGRLPKVLVLAPTRELAK 188


>ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  144 bits (362), Expect = 3e-32
 Identities = 91/173 (52%), Positives = 102/173 (58%)
 Frame = +2

Query: 311 PNSFLSEKAFKGLGVFXXXXXXXXXXXXXXXXXXXXASIVDGTGNVTDDDELAITKLGLP 490
           PNS LSE+AFKGL  F                    AS      + T +DEL ++KLGLP
Sbjct: 86  PNSILSEEAFKGLDGFSDFEADVDAGGADVDY----ASSETEPSSNTSEDELDVSKLGLP 141

Query: 491 QRLVQSLEKREITRLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIXXXXXXXXXXXX 670
            RLVQ+L+ R IT LFPIQRAVL+PALEGRD+IARAKTGTGKT                 
Sbjct: 142 HRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKT----------------- 184

Query: 671 XXXXXXXXXXKTLAFGIPIIKRLTEDDEERISPRRAQRLPRVLVLAPTRELAR 829
                       LAFGIPIIKRLTED E R S RR  RLP+VLVLAPTRELA+
Sbjct: 185 ------------LAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAK 225


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