BLASTX nr result

ID: Atractylodes21_contig00007251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007251
         (2212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containi...   437   e-120
ref|XP_002512033.1| pentatricopeptide repeat-containing protein,...   434   e-119
ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containi...   426   e-116
ref|XP_003626108.1| Pentatricopeptide repeat-containing protein ...   425   e-116

>ref|XP_002304609.1| predicted protein [Populus trichocarpa] gi|222842041|gb|EEE79588.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  510 bits (1313), Expect = e-142
 Identities = 239/408 (58%), Positives = 313/408 (76%)
 Frame = +2

Query: 665  WASAIKNASSPRKSLQIYTQMHRQAIPVDSFVVLYTLTASTRXXXXXXXXXXXXXISKLG 844
            W  AIKNASSP K+LQ+YT MHRQ+IP D+F +L+TL + T              I KLG
Sbjct: 24   WVLAIKNASSPHKALQLYTHMHRQSIPFDTFSILFTLKSCTHLKNLTIIHHLHSHIIKLG 83

Query: 845  FTSNVYIMSSLLHAYSNASFDDACDLFDEMSDRTTVTWNTMITGFSRSGNVDKARSLFDE 1024
            F ++VY+ + LLHAY+  SFD ACDLFDEM  R  VTWNTMITG+SRSG+++KARSLF+ 
Sbjct: 84   FNTHVYVSTCLLHAYAVMSFDQACDLFDEMPQRNIVTWNTMITGYSRSGSINKARSLFEA 143

Query: 1025 MPLRNIASWSAMIAAYFNSGHRKKGLALFCMMLIDEKLKPDQFTLCAVLGGCGRMGTIGS 1204
            MP+R+ ASWSAMI  Y N+G R +GL+ F  M+ +E  KPDQ T+ +VL GC  MG++G 
Sbjct: 144  MPVRDAASWSAMITCYINNGFRDQGLSFFQEMMANENPKPDQVTVGSVLSGCAHMGSLGL 203

Query: 1205 VLGKSIHGFIMRNEWELNVELGTALVDMYAKCGFLKVASVVFDMMRDTNVISWTALICGA 1384
            + GKS+HGF+++N WELNV++GT LVDMYAKCGF K A  VF +M++ NV +WTALICGA
Sbjct: 204  LAGKSVHGFVVKNGWELNVDIGTLLVDMYAKCGFFKNAVWVFVLMQERNVSTWTALICGA 263

Query: 1385 AQHGYINEARTLFQRMQEVGVKPNEFTFTGILNACVHAGLVEEGRMYFEMIEEYGLKPKI 1564
            AQHG+  E  +LF+ MQE GV+PNE TFTGILNAC   GL+EEGR YF+MI+E GL+P+I
Sbjct: 264  AQHGFCQEVLSLFKMMQEAGVRPNEMTFTGILNACARKGLIEEGRKYFKMIKETGLEPRI 323

Query: 1565 HHYCCMVDLFGKAGELEDAHEVITRMQPKANMNVWGSFLYSCKVQNNFKMAERVIDGVIE 1744
             HY CMVD+FGKAG LE+A+EVI  M+ + N+ +WGSFL +CK+   F +A+RVI  V+ 
Sbjct: 324  QHYGCMVDMFGKAGLLEEAYEVIKEMEFEPNIVIWGSFLSACKMHKQFDIADRVIGQVLR 383

Query: 1745 MLRPEKDGGVYTLIADLFVMGEKWDDAERMRRLMVSQNVRKARGASFI 1888
             ++PE DGG+Y+L++DL+V+ +KWDDAER+R L+++QNVRKARG+S I
Sbjct: 384  DIKPENDGGIYSLVSDLYVLNKKWDDAERVRNLVLNQNVRKARGSSCI 431


>ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Cucumis sativus]
          Length = 436

 Score =  437 bits (1123), Expect = e-120
 Identities = 214/410 (52%), Positives = 292/410 (71%)
 Frame = +2

Query: 665  WASAIKNASSPRKSLQIYTQMHRQAIPVDSFVVLYTLTASTRXXXXXXXXXXXXXISKLG 844
            WA  I+NA S  K+L  Y+QMHRQ++P DSF +L+ L A                I+KLG
Sbjct: 27   WALRIRNAPSLHKALAFYSQMHRQSVPHDSFSILFMLKACASSNNLSILHHLHAHITKLG 86

Query: 845  FTSNVYIMSSLLHAYSNASFDDACDLFDEMSDRTTVTWNTMITGFSRSGNVDKARSLFDE 1024
            FT++V++ +SLLH+Y   SF  A  +FDEM  + +VTWNTMI+G+S++G+V  AR LFD 
Sbjct: 87   FTTHVFVATSLLHSYVLHSFQLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQLFDR 146

Query: 1025 MPLRNIASWSAMIAAYFNSGHRKKGLALFCMMLIDEKLKPDQFTLCAVLGGCGRMGTIGS 1204
            MP R++ASWSAMIAAY N+ + +  L LF  M+I+  + PDQ    ++L GC  MG++G 
Sbjct: 147  MPSRDLASWSAMIAAYINNRNYRGALLLFQDMIING-INPDQMAAGSILNGCAHMGSLGL 205

Query: 1205 VLGKSIHGFIMRNEWELNVELGTALVDMYAKCGFLKVASVVFDMMRDTNVISWTALICGA 1384
            + GKS+HGF+++N WELN+ELGT LVDMYAKCGFLK A  +F++M + NV +WTALICG 
Sbjct: 206  LAGKSVHGFVVKNRWELNLELGTVLVDMYAKCGFLKYACQIFNLMSERNVRTWTALICGL 265

Query: 1385 AQHGYINEARTLFQRMQEVGVKPNEFTFTGILNACVHAGLVEEGRMYFEMIEEYGLKPKI 1564
            A HG   EA  LF+ M+  GV+PNEFTFTG+L+ACVHAGLV+EGR YF MIEE GL+ +I
Sbjct: 266  AHHGCCKEALVLFETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFNMIEECGLEIRI 325

Query: 1565 HHYCCMVDLFGKAGELEDAHEVITRMQPKANMNVWGSFLYSCKVQNNFKMAERVIDGVIE 1744
             HY C VDL G++G LE+A+ VI  M+ + N+ VW S L +CK   +F +AERVI+ ++E
Sbjct: 326  QHYGCFVDLLGRSGLLEEAYGVIKSMRLEPNVIVWSSLLSACKQHKSFDLAERVIEQILE 385

Query: 1745 MLRPEKDGGVYTLIADLFVMGEKWDDAERMRRLMVSQNVRKARGASFISS 1894
             + P+   GVY+L++DL+V+ +KWDDAE +R L+ +Q+VRK R  S I S
Sbjct: 386  KIEPDNHAGVYSLVSDLYVLQDKWDDAENIRNLL-NQHVRKGRAYSLIRS 434


>ref|XP_002512033.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549213|gb|EEF50702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 319

 Score =  434 bits (1116), Expect = e-119
 Identities = 200/319 (62%), Positives = 253/319 (79%)
 Frame = +2

Query: 932  MSDRTTVTWNTMITGFSRSGNVDKARSLFDEMPLRNIASWSAMIAAYFNSGHRKKGLALF 1111
            M +R T+TWNTMITG+SRSGN+DKAR+ F+EMPLR++ SWSAMI AY N G   +GL LF
Sbjct: 1    MPERNTITWNTMITGYSRSGNIDKARAFFEEMPLRDVGSWSAMITAYINHGRWDRGLLLF 60

Query: 1112 CMMLIDEKLKPDQFTLCAVLGGCGRMGTIGSVLGKSIHGFIMRNEWELNVELGTALVDMY 1291
              M+ + +LKPDQ T+  VL GC  MG +G ++GKS HGFIM+N WELNVE+GT LVDMY
Sbjct: 61   REMMTNSELKPDQVTVGTVLSGCTHMGFLGLLVGKSAHGFIMKNRWELNVEIGTVLVDMY 120

Query: 1292 AKCGFLKVASVVFDMMRDTNVISWTALICGAAQHGYINEARTLFQRMQEVGVKPNEFTFT 1471
             KCG+LK A  VFD+M++ NV++WTALICGAAQHGY  E  +LF  MQE  ++PNE TFT
Sbjct: 121  VKCGYLKNAIRVFDLMKERNVMTWTALICGAAQHGYSEETLSLFNMMQEAKIRPNELTFT 180

Query: 1472 GILNACVHAGLVEEGRMYFEMIEEYGLKPKIHHYCCMVDLFGKAGELEDAHEVITRMQPK 1651
            GILN C H+GLVEEG+ YF MIEEYGL+ +I HY CMVDLFGKAG L++A+ VI  M+ +
Sbjct: 181  GILNVCAHSGLVEEGKKYFRMIEEYGLERRIQHYGCMVDLFGKAGLLDEAYNVIKTMKVE 240

Query: 1652 ANMNVWGSFLYSCKVQNNFKMAERVIDGVIEMLRPEKDGGVYTLIADLFVMGEKWDDAER 1831
             N+ +WGSFL +CK    F MAERVI+ V+++++PE DGG+YTL+ DL+   EKWDDAER
Sbjct: 241  NNVVIWGSFLSACKEHKKFDMAERVIEQVLKVIKPENDGGIYTLVCDLYTSNEKWDDAER 300

Query: 1832 MRRLMVSQNVRKARGASFI 1888
            +R+LM++QNVRKARG+SFI
Sbjct: 301  VRKLMLNQNVRKARGSSFI 319


>ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
            [Vitis vinifera]
          Length = 324

 Score =  426 bits (1095), Expect = e-116
 Identities = 201/321 (62%), Positives = 259/321 (80%)
 Frame = +2

Query: 932  MSDRTTVTWNTMITGFSRSGNVDKARSLFDEMPLRNIASWSAMIAAYFNSGHRKKGLALF 1111
            M  + TVTWNTMIT +S+SG+V KAR +F++MPLR++ASWSAM+A Y   G    GLALF
Sbjct: 1    MPHKNTVTWNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGEWHSGLALF 60

Query: 1112 CMMLIDEKLKPDQFTLCAVLGGCGRMGTIGSVLGKSIHGFIMRNEWELNVELGTALVDMY 1291
              M+++E L+PD+ TL +VL GC RMG++G ++G+SIHGF  +N WEL+V+LGT LVDMY
Sbjct: 61   REMVVNEGLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNGWELSVDLGTVLVDMY 120

Query: 1292 AKCGFLKVASVVFDMMRDTNVISWTALICGAAQHGYINEARTLFQRMQEVGVKPNEFTFT 1471
            AKCGFLK A  VFD+M++ NV SWTALICG+AQHGY  EA ++F+ MQ++GVKPNE TFT
Sbjct: 121  AKCGFLKSAFRVFDLMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGVKPNEMTFT 180

Query: 1472 GILNACVHAGLVEEGRMYFEMIEEYGLKPKIHHYCCMVDLFGKAGELEDAHEVITRMQPK 1651
            GIL+AC  AGLVEEGR YF  IEEYGL+P+I H+ CMVDLFGKAG LE+A+E+I  M+ +
Sbjct: 181  GILSACAQAGLVEEGRKYFNKIEEYGLEPRIQHFGCMVDLFGKAGLLEEAYEIINSMKLE 240

Query: 1652 ANMNVWGSFLYSCKVQNNFKMAERVIDGVIEMLRPEKDGGVYTLIADLFVMGEKWDDAER 1831
             N+ +W SFL SCKV   F++AERV + V+  ++PE DGGVYTLI++LFV+ +KWDDAER
Sbjct: 241  PNVVLWSSFLSSCKVHKQFELAERVTEQVLRTVKPENDGGVYTLISNLFVLNDKWDDAER 300

Query: 1832 MRRLMVSQNVRKARGASFISS 1894
            +R+LMV+Q VRKARG+SFI S
Sbjct: 301  VRKLMVNQKVRKARGSSFIRS 321


>ref|XP_003626108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240992|gb|ABD32850.1| Pentatricopeptide repeat
            [Medicago truncatula] gi|355501123|gb|AES82326.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 417

 Score =  425 bits (1093), Expect = e-116
 Identities = 212/410 (51%), Positives = 293/410 (71%), Gaps = 3/410 (0%)
 Frame = +2

Query: 665  WASAIKNA---SSPRKSLQIYTQMHRQAIPVDSFVVLYTLTASTRXXXXXXXXXXXXXIS 835
            WA AIK A   SSPRK++Q+Y++MHR  +P+D+F +L+TL +STR             I 
Sbjct: 5    WALAIKKAYSSSSPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTRLPIIHHLHAH---II 61

Query: 836  KLGFTSNVYIMSSLLHAYSNASFDDACDLFDEMSDRTTVTWNTMITGFSRSGNVDKARSL 1015
            KLGFTS+ +I + LL++Y   SF DAC LFDEM  R TVTWNTMI G+SR  +V KAR L
Sbjct: 62   KLGFTSHFHISTCLLNSYVFLSFLDACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQL 121

Query: 1016 FDEMPLRNIASWSAMIAAYFNSGHRKKGLALFCMMLIDEKLKPDQFTLCAVLGGCGRMGT 1195
            FDEMP R+I SW  MI+AY N G   + L LF  ML  E +KPDQ   C VL GC  +  
Sbjct: 122  FDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVER 181

Query: 1196 IGSVLGKSIHGFIMRNEWELNVELGTALVDMYAKCGFLKVASVVFDMMRDTNVISWTALI 1375
             G + GKS+HG+I++N WELNVE+G ALV+MYAK G L+ A++V ++M + +V SWT +I
Sbjct: 182  HGLLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMI 241

Query: 1376 CGAAQHGYINEARTLFQRMQEVGVKPNEFTFTGILNACVHAGLVEEGRMYFEMIEEYGLK 1555
            CGA + G+  EA  +F++MQ  GVKPNE TFTG+L+AC H G VE+GR YF+MIEE GLK
Sbjct: 242  CGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEECGLK 301

Query: 1556 PKIHHYCCMVDLFGKAGELEDAHEVITRMQPKANMNVWGSFLYSCKVQNNFKMAERVIDG 1735
            P++ HY C+V L GK+G LE+A+E+I  M+ + ++ V GSFL +CK    F++AE VI+ 
Sbjct: 302  PRVQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEHKQFEIAEGVIEQ 361

Query: 1736 VIEMLRPEKDGGVYTLIADLFVMGEKWDDAERMRRLMVSQNVRKARGASF 1885
            V+ M +PE   G+Y+LIADL+V+G+K ++AERM++L++ +++R+A+G +F
Sbjct: 362  VLRMAKPENYRGLYSLIADLYVIGDKSEEAERMKKLIIKEHLRQAKGLNF 411


Top