BLASTX nr result

ID: Atractylodes21_contig00007210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007210
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precurs...   265   8e-69
gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc...   245   5e-63
gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius]   245   5e-63
gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinc...   213   2e-53
dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum...   204   2e-50

>gb|ABA55807.1| chloroplast omega-3 fatty acid desaturase precursor [Crepis alpina]
          Length = 438

 Score =  265 bits (676), Expect = 8e-69
 Identities = 128/173 (73%), Positives = 135/173 (78%), Gaps = 3/173 (1%)
 Frame = -1

Query: 512 MATWVLSECGLRPLPRVYSNPTTRISASSFPNSITIPPSKILRPKSLVSRERRWALKVSA 333
           MATWVLSECGLRPLPR+YSNP TRIS+SSFPNS+ + PSKI RP   VSR+RRWALKVSA
Sbjct: 1   MATWVLSECGLRPLPRLYSNPRTRISSSSFPNSVRLAPSKIFRPNLSVSRDRRWALKVSA 60

Query: 332 PVGVQLXXXXXXXXXXXXXE---FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVLRD 162
           PVGVQ                  FNPGAPPPFTL DIRAAIPKHCWVK+PWKSMSYV+RD
Sbjct: 61  PVGVQFIEEDEQKVNGINAGESEFNPGAPPPFTLADIRAAIPKHCWVKNPWKSMSYVVRD 120

Query: 161 XXXXXXXXXXXAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 3
                      AYFNNMVVWPLYW AQGTMFWALFVLGHDCGHGSFSNNAKLN
Sbjct: 121 VVVVFGLAAVAAYFNNMVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNAKLN 173


>gb|AEK06372.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius]
          Length = 440

 Score =  245 bits (626), Expect = 5e-63
 Identities = 123/178 (69%), Positives = 132/178 (74%), Gaps = 8/178 (4%)
 Frame = -1

Query: 512 MATWVLSECGLRPLP-RVYSNPTTRI----SASSFPNSITIPPSKILRPKSLVSRERRWA 348
           MA  VLSECGLRPLP R+Y NPTTR     S  SFPNSI+I P KI +P SLV+R +RW 
Sbjct: 1   MANLVLSECGLRPLPTRLYPNPTTRTRTTTSTCSFPNSISIAPKKIFKPDSLVARGQRWP 60

Query: 347 LKVSAPVGVQLXXXXXXXXXXXXXE---FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS 177
           +KV+APVG+Q                  FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS
Sbjct: 61  VKVTAPVGIQFVDEDEKRVNGVKEREGEFNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS 120

Query: 176 YVLRDXXXXXXXXXXXAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 3
           YV+RD           AYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN
Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 178


>gb|ADR80039.1| plastid fatty acid desaturase [Carthamus tinctorius]
          Length = 440

 Score =  245 bits (626), Expect = 5e-63
 Identities = 123/178 (69%), Positives = 132/178 (74%), Gaps = 8/178 (4%)
 Frame = -1

Query: 512 MATWVLSECGLRPLP-RVYSNPTTRI----SASSFPNSITIPPSKILRPKSLVSRERRWA 348
           MA  VLSECGLRPLP R+Y NPTTR     S  SFPNSI+I P KI +P SLV+R +RW 
Sbjct: 1   MANLVLSECGLRPLPTRLYPNPTTRTRTTTSTCSFPNSISIAPKKIFKPDSLVARGQRWP 60

Query: 347 LKVSAPVGVQLXXXXXXXXXXXXXE---FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS 177
           +KV+APVG+Q                  FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS
Sbjct: 61  VKVTAPVGIQFVDEDEKRVNGVKEREGEFNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMS 120

Query: 176 YVLRDXXXXXXXXXXXAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 3
           YV+RD           AYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN
Sbjct: 121 YVVRDVVVVFGLAAVAAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 178


>gb|AEK06371.1| plastid omega-3 desaturase FAD7/8 [Carthamus tinctorius]
          Length = 441

 Score =  213 bits (543), Expect = 2e-53
 Identities = 110/180 (61%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
 Frame = -1

Query: 512 MATWVLSECGLRPLPRVYSNPTTRISASS---FPNSITIPPSKILRPKSL------VSRE 360
           MA  VLSECGLRP+PR+Y  P T IS S+    PNSI IPP +   P  +      V   
Sbjct: 1   MANLVLSECGLRPIPRIYPKPKTGISNSNPNPNPNSIPIPPFRPSNPIPISTSLPRVGNH 60

Query: 359 RRWALKVSAPVGVQ-LXXXXXXXXXXXXXEFNPGAPPPFTLGDIRAAIPKHCWVKDPWKS 183
           R WALKVSAP+ +Q               EF+PGAPPPFT+ DIRAAIPKHCWVKDPW+S
Sbjct: 61  RNWALKVSAPLKIQPSDEDEIVTTNDGDSEFDPGAPPPFTMADIRAAIPKHCWVKDPWRS 120

Query: 182 MSYVLRDXXXXXXXXXXXAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 3
           MSYV+RD           AYFNNMVVWPLYW AQ TMFWALFVLGHDCGHGSFSNN KLN
Sbjct: 121 MSYVVRDVVVVFGLAAVAAYFNNMVVWPLYWIAQSTMFWALFVLGHDCGHGSFSNNGKLN 180


>dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum]
           gi|21668486|dbj|BAC01274.1| plastid omega-3 fatty acid
           desaturase [Nicotiana tabacum]
          Length = 441

 Score =  204 bits (518), Expect = 2e-50
 Identities = 104/177 (58%), Positives = 120/177 (67%), Gaps = 7/177 (3%)
 Frame = -1

Query: 512 MATWVLSECGLRPLPRVYSNPTTRISASSFPNSITIPPSKILRPKSLVS-----RERRWA 348
           MA+WVLSECGLRPLPR+Y  P T  +A+S  + I +  S+     S +S     +ER WA
Sbjct: 1   MASWVLSECGLRPLPRIYPKPRTG-AATSASSHIKLRISRTDLSGSAISLSNTNKERNWA 59

Query: 347 LKVSAPVGVQLXXXXXXXXXXXXXE--FNPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSY 174
           L+VSAP+ +Q                 F+PGAPPPF L DI+AAIPKHCWVK+PWKSMSY
Sbjct: 60  LRVSAPLRIQTVGEEESERTNNSGGEFFDPGAPPPFKLSDIKAAIPKHCWVKNPWKSMSY 119

Query: 173 VLRDXXXXXXXXXXXAYFNNMVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNNAKLN 3
           V+RD           AYFNN VVWPLYWFAQ TMFWALFVLGHDCGHGSFSNN KLN
Sbjct: 120 VVRDVAIVFGLAAAAAYFNNWVVWPLYWFAQSTMFWALFVLGHDCGHGSFSNNHKLN 176


Top