BLASTX nr result

ID: Atractylodes21_contig00007186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007186
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   125   5e-27
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   125   5e-27
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]   125   5e-27
ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro...   124   1e-26
ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing fact...   124   1e-26

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/63 (95%), Positives = 60/63 (95%)
 Frame = +1

Query: 1    QSDFRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVCAEYGLKRQEA 180
            QSD RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRV AEY LKRQEA
Sbjct: 1369 QSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 1428

Query: 181  QSQ 189
            QSQ
Sbjct: 1429 QSQ 1431


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/63 (95%), Positives = 60/63 (95%)
 Frame = +1

Query: 1    QSDFRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVCAEYGLKRQEA 180
            QSD RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRV AEY LKRQEA
Sbjct: 1349 QSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 1408

Query: 181  QSQ 189
            QSQ
Sbjct: 1409 QSQ 1411


>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
          Length = 2294

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/63 (95%), Positives = 60/63 (95%)
 Frame = +1

Query: 1    QSDFRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVCAEYGLKRQEA 180
            QSD RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRV AEY LKRQEA
Sbjct: 1320 QSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 1379

Query: 181  QSQ 189
            QSQ
Sbjct: 1380 QSQ 1382


>ref|XP_004158783.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor
            8-like [Cucumis sativus]
          Length = 2347

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +1

Query: 1    QSDFRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVCAEYGLKRQEA 180
            QSD RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRV AEY LKRQEA
Sbjct: 1349 QSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 1408

Query: 181  QSQ 189
            Q+Q
Sbjct: 1409 QAQ 1411


>ref|XP_004135844.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cucumis
            sativus]
          Length = 2347

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +1

Query: 1    QSDFRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVCAEYGLKRQEA 180
            QSD RYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRV AEY LKRQEA
Sbjct: 1349 QSDLRYSQQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEA 1408

Query: 181  QSQ 189
            Q+Q
Sbjct: 1409 QAQ 1411


Top