BLASTX nr result

ID: Atractylodes21_contig00007137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007137
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43529.1| unknown [Lotus japonicus]                              131   7e-29
ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257...   124   6e-27
ref|NP_568923.1| RING/U-box domain-containing protein [Arabidops...   122   2e-26
ref|XP_002314269.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002280929.2| PREDICTED: uncharacterized protein LOC100265...   122   4e-26

>gb|AFK43529.1| unknown [Lotus japonicus]
          Length = 139

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = -1

Query: 345 LLSSMTSSTMVKRRFIWLYASIQFVFVVIFAHIFYNVIHIQPVLSILLATFAGCGVVMCG 166
           LLSSMTSSTMVK RFIW+YAS+QF  VV+FAHIFY+V+H+Q VLSILLATFAG GVVMCG
Sbjct: 33  LLSSMTSSTMVKSRFIWIYASVQFALVVLFAHIFYSVVHVQAVLSILLATFAGFGVVMCG 92

Query: 165 SSILVEVLRLKRRWHARSNQQ 103
           SSILVEV R +RRW A S QQ
Sbjct: 93  SSILVEVFRWRRRWQALSEQQ 113


>ref|XP_002282323.1| PREDICTED: uncharacterized protein LOC100257089 [Vitis vinifera]
          Length = 557

 Score =  124 bits (312), Expect = 6e-27
 Identities = 65/115 (56%), Positives = 84/115 (73%), Gaps = 8/115 (6%)
 Frame = -1

Query: 345 LLSSMTSSTMVKRRFIWLYASIQFVFVVIFAHIFYNVIHIQPVLSILLATFAGCGVVMCG 166
           LL+SMT+STMVKRRFIW+YASIQF  VV+FAHIFY+++ +Q VLSILL+TFAG G+ M G
Sbjct: 428 LLASMTASTMVKRRFIWVYASIQFALVVLFAHIFYSLVRVQAVLSILLSTFAGLGIAMSG 487

Query: 165 SSILVEVLRLKRRWHARSNQQTD-------SRAVLHP-EAPQQSLSSSHADPSHQ 25
           SSI+VE+LR + RWHA S QQ         S+    P +A + + +S HA+  HQ
Sbjct: 488 SSIIVELLRWRLRWHAWSEQQQQQQQQRQRSQVGAQPGQAAESAAASHHANSHHQ 542


>ref|NP_568923.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|30697386|ref|NP_851231.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
           gi|9757760|dbj|BAB08241.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009964|gb|AED97347.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana] gi|332009966|gb|AED97349.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 487

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/113 (53%), Positives = 82/113 (72%)
 Frame = -1

Query: 345 LLSSMTSSTMVKRRFIWLYASIQFVFVVIFAHIFYNVIHIQPVLSILLATFAGCGVVMCG 166
           LL+SMT+STMV RRF+W+YAS+QF  VV+FAHIFY+V+ +QPVLS+LL+TFAG GV +CG
Sbjct: 380 LLASMTASTMVMRRFVWIYASVQFALVVLFAHIFYSVVKLQPVLSVLLSTFAGFGVCICG 439

Query: 165 SSILVEVLRLKRRWHARSNQQTDSRAVLHPEAPQQSLSSSHADPSHQIEIRNT 7
           SS++VE +R +RRW AR  +Q  + A+   + PQ        DP+  +   NT
Sbjct: 440 SSVMVEFVRWRRRWRARRLEQQLNHALTLSQPPQP------LDPTTSLHHSNT 486


>ref|XP_002314269.1| predicted protein [Populus trichocarpa] gi|222850677|gb|EEE88224.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/102 (57%), Positives = 80/102 (78%)
 Frame = -1

Query: 345 LLSSMTSSTMVKRRFIWLYASIQFVFVVIFAHIFYNVIHIQPVLSILLATFAGCGVVMCG 166
           LLSSM SSTMV+RRF+W+YASIQF  +V+FAHIFY ++++Q VL+ILLAT +G GV M G
Sbjct: 398 LLSSMISSTMVRRRFVWVYASIQFALIVLFAHIFYTLVNVQAVLAILLATLSGFGVAMSG 457

Query: 165 SSILVEVLRLKRRWHARSNQQTDSRAVLHPEAPQQSLSSSHA 40
           SSILVE LR +RRWHA+  Q   S+ +  P   Q++++SS++
Sbjct: 458 SSILVEFLRWRRRWHAQHGQLHSSQVITGPGPFQRAVNSSNS 499


>ref|XP_002280929.2| PREDICTED: uncharacterized protein LOC100265508 [Vitis vinifera]
           gi|297741592|emb|CBI32724.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/114 (52%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
 Frame = -1

Query: 345 LLSSMTSSTMVKRRFIWLYASIQFVFVVIFAHIFYNVIHIQPVLSILLATFAGCGVVMCG 166
           LL+SMTS+T+V+RR++W+YASIQF  VV FAHIFY++ H+Q VLS+LLATFAG GV MCG
Sbjct: 397 LLASMTSTTLVRRRYVWVYASIQFGLVVFFAHIFYSLFHVQAVLSVLLATFAGFGVTMCG 456

Query: 165 SSILVEVLRLKRRWHARSNQQTDSRAVLHPE-APQQSLSSSHADPSHQIEIRNT 7
           +S +VE L+ +RRW A S+QQ  S+ V   + +P  +       P H+ E+ N+
Sbjct: 457 NSFVVEFLKWRRRWLAGSDQQHSSQEVTQMDGSPGTANPPQTGSPHHETEMGNS 510


Top