BLASTX nr result

ID: Atractylodes21_contig00007055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00007055
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding prote...    91   3e-16
gb|ADK63398.1| Ran-binding zinc finger protein [Brassica rapa]         89   6e-16
ref|XP_003603428.1| Zinc finger protein-like protein [Medicago t...    89   1e-15
ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Ar...    87   2e-15
ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidops...    87   4e-15

>ref|XP_002282524.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Vitis
           vinifera] gi|296082008|emb|CBI21013.3| unnamed protein
           product [Vitis vinifera]
          Length = 158

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 45/109 (41%), Positives = 54/109 (49%)
 Frame = +3

Query: 6   GSGSSAATGCWVRNFKPGDWFCSVAICQAHNFASRRICFKCGAAKNAPSFGGNGGFYHPM 185
           GS S   TG  VR   PGDW+C++  C AHNFASR  CFKCG  K+  S G  G    P 
Sbjct: 43  GSSSFGFTGPDVR---PGDWYCTIGNCGAHNFASRSSCFKCGGLKDESSGGYEGDMSRP- 98

Query: 186 FSPLSYXXXXXXXXXXXXXXXXXXDWFCGRLGCNAHNYGTRVRCFRCNS 332
                +                  DW C R GCN HN+ +R+ CFRCN+
Sbjct: 99  -RGFGFGSGGSSGSGIGRSGWKSGDWICNRSGCNEHNFASRMECFRCNA 146


>gb|ADK63398.1| Ran-binding zinc finger protein [Brassica rapa]
          Length = 163

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 39/94 (41%), Positives = 49/94 (52%)
 Frame = +3

Query: 51  KPGDWFCSVAICQAHNFASRRICFKCGAAKNAPSFGGNGGFYHPMFSPLSYXXXXXXXXX 230
           +PGDW+C+V  C  HNFASR  CFKCG  K+  + GG GG   P                
Sbjct: 61  RPGDWYCTVGSCGTHNFASRSTCFKCGTFKDESTGGGGGGVGGPAVFDTD-LMRSRVSGN 119

Query: 231 XXXXXXXXXDWFCGRLGCNAHNYGTRVRCFRCNS 332
                    DW C R+GCN HN+ +R+ CFRCN+
Sbjct: 120 AGRSSWKSGDWICTRIGCNEHNFASRMECFRCNA 153


>ref|XP_003603428.1| Zinc finger protein-like protein [Medicago truncatula]
           gi|355492476|gb|AES73679.1| Zinc finger protein-like
           protein [Medicago truncatula]
          Length = 185

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
 Frame = +3

Query: 6   GSGSSA----ATGCWVRNFKPGDWFCSVAICQAHNFASRRICFKCGAAKNAPSFGGNGGF 173
           G GSS+     TG  VR   PGDW+C+V  C AHNFASR  CFKCGA K+  +F  +   
Sbjct: 47  GRGSSSPFPFTTGPDVR---PGDWYCTVGNCGAHNFASRSSCFKCGAPKDIDTFSSDSSD 103

Query: 174 YHPMF-SPLSYXXXXXXXXXXXXXXXXXXDWFCGRLGCNAHNYGTRVRCFRCN 329
              +  SP  +                  DW C R GCN HN+  R+ C+RCN
Sbjct: 104 MPRLLRSPYGFGAGSAGGGASTRPGWKSGDWICTRSGCNEHNFANRMECYRCN 156


>ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328797|gb|EFH59216.1| zinc finger
           (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 164

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 38/94 (40%), Positives = 48/94 (51%)
 Frame = +3

Query: 51  KPGDWFCSVAICQAHNFASRRICFKCGAAKNAPSFGGNGGFYHPMFSPLSYXXXXXXXXX 230
           +PGDW+C+V  C  HNFASR  CFKCG  K+    GG GG         +          
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADVMRSRVPSN 120

Query: 231 XXXXXXXXXDWFCGRLGCNAHNYGTRVRCFRCNS 332
                    DW C R+GCN HN+ +R+ CFRCN+
Sbjct: 121 GGRSSWKSGDWICTRIGCNEHNFASRIECFRCNA 154


>ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
           gi|11994340|dbj|BAB02299.1| zinc finger protein-like;
           Ser/Thr protein kinase-like protein [Arabidopsis
           thaliana] gi|89274153|gb|ABD65597.1| At3g15680
           [Arabidopsis thaliana] gi|332642192|gb|AEE75713.1| Ran
           BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
          Length = 164

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 38/94 (40%), Positives = 48/94 (51%)
 Frame = +3

Query: 51  KPGDWFCSVAICQAHNFASRRICFKCGAAKNAPSFGGNGGFYHPMFSPLSYXXXXXXXXX 230
           +PGDW+C+V  C  HNFASR  CFKCG  K+    GG GG         +          
Sbjct: 61  RPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGN 120

Query: 231 XXXXXXXXXDWFCGRLGCNAHNYGTRVRCFRCNS 332
                    DW C R+GCN HN+ +R+ CFRCN+
Sbjct: 121 GGRSSWKSGDWICTRIGCNEHNFASRMECFRCNA 154


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