BLASTX nr result

ID: Atractylodes21_contig00006980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006980
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    77   1e-12
emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]    75   4e-12
emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]    74   9e-12
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    72   6e-11
emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]    66   3e-09

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = +2

Query: 2    QPERLLDVRSVTRADGVWLEVLLKWKDLPTEEATWEDMTTMQHLFPEFHLEDKVRVWEGG 181
            +PE LLDVR + +    + E L+KWK LP  EATWEDM+ +   FP FHLEDKV VW  G
Sbjct: 1541 EPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKVNVWGAG 1600

Query: 182  NV---TTPPIWVTYER 220
             V      P  +TY+R
Sbjct: 1601 IVMHQLKKPNLITYKR 1616


>emb|CAN79493.1| hypothetical protein VITISV_033374 [Vitis vinifera]
          Length = 455

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/73 (52%), Positives = 46/73 (63%)
 Frame = +2

Query: 2   QPERLLDVRSVTRADGVWLEVLLKWKDLPTEEATWEDMTTMQHLFPEFHLEDKVRVWEGG 181
           +P  +L VR         +EVL++WKDLP  EATWE   T+Q+ FPEFHL DKV VWE G
Sbjct: 378 EPTAILGVRQHHTESTSVIEVLVQWKDLPDFEATWESFATIQNQFPEFHLVDKVVVWEEG 437

Query: 182 NVTTPPIWVTYER 220
           N   PP+  TY R
Sbjct: 438 N-DKPPVRFTYAR 449


>emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
          Length = 818

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = +2

Query: 2   QPERLLDVRSVTRADGVWLEVLLKWKDLPTEEATWEDMTTMQHLFPEFHLEDKVRVWEGG 181
           +P  +L VR          EVL++WKDLP  EATWE    +Q+ FPEFHL ++V VWEGG
Sbjct: 737 EPTAILGVRQRHTGSTPVTEVLVQWKDLPDFEATWESFAAIQNQFPEFHLANRVAVWEGG 796

Query: 182 NVTTPPIWVTYER 220
           N   PP+  TY R
Sbjct: 797 NY-RPPVHFTYAR 808


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/78 (48%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
 Frame = +2

Query: 2    QPERLLDVRSVTRADGVWLEVLLKWKDLPTEEATWEDMTTMQHLFPEFHLEDKVRVWEGG 181
            QPE LL++RS  +      EVL+KW +LP  EATWED       FP+FHLEDKV  WEG 
Sbjct: 1474 QPESLLNIRSHPQKPAEVTEVLIKWLNLPAFEATWEDAALFNARFPDFHLEDKVLNWEGS 1533

Query: 182  NVTT-----PPIWVTYER 220
               +     PPI  TY R
Sbjct: 1534 IAKSPTRIIPPIVHTYSR 1551


>emb|CAN66228.1| hypothetical protein VITISV_012977 [Vitis vinifera]
          Length = 1258

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/65 (46%), Positives = 45/65 (69%)
 Frame = +2

Query: 2    QPERLLDVRSVTRADGVWLEVLLKWKDLPTEEATWEDMTTMQHLFPEFHLEDKVRVWEGG 181
            +P+++LD+R     +   +EVL++WK LP  EA+WE + T++  FP+FHLEDKV + EGG
Sbjct: 1189 EPDQVLDIRQSPNNNQPDIEVLIQWKGLPQFEASWELVDTIKKHFPDFHLEDKVSLIEGG 1248

Query: 182  NVTTP 196
            N   P
Sbjct: 1249 NDRPP 1253


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