BLASTX nr result

ID: Atractylodes21_contig00006855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006855
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   223   2e-56
gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   219   6e-55
ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|1...   218   1e-54
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   217   2e-54
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus...   214   1e-53

>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  223 bits (569), Expect = 2e-56
 Identities = 118/157 (75%), Positives = 125/157 (79%)
 Frame = +2

Query: 62  MAQALATPVAXXXXXXXXXXXXXXXXXXXXXXXXXXTFNPPKVGGLSIRCARVGGVEIPN 241
           MAQALATP+A                          T  PPK GGLSI+CARVGGVEIPN
Sbjct: 1   MAQALATPLAPSLSLICNTRNPLSPSNNLSFS----TPAPPKFGGLSIKCARVGGVEIPN 56

Query: 242 NKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLRDEVSKYMIEGDLRRF 421
           +KRV+YSLQYIHGIGR+R+ +IL DL MENKITKDLSEEELITLRDEVSKYMIEGDLRRF
Sbjct: 57  SKRVEYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRF 116

Query: 422 NALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 532
           NALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 117 NALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  219 bits (557), Expect = 6e-55
 Identities = 105/119 (88%), Positives = 114/119 (95%)
 Frame = +2

Query: 176 NPPKVGGLSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSE 355
           NPPK+ GLSI+CARVGGVEIPNNKRV+YSLQYIHG+GR+RA +IL+DL M+NKITKDLSE
Sbjct: 35  NPPKIHGLSIQCARVGGVEIPNNKRVEYSLQYIHGVGRSRARQILSDLSMQNKITKDLSE 94

Query: 356 EELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 532
           EELITLRDEVSKYMIEGDLRRFNAL IR LKEIQC+RGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 95  EELITLRDEVSKYMIEGDLRRFNALNIRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1|
           unknown [Populus trichocarpa]
           gi|222843982|gb|EEE81529.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  218 bits (554), Expect = 1e-54
 Identities = 106/119 (89%), Positives = 111/119 (93%)
 Frame = +2

Query: 176 NPPKVGGLSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSE 355
           NPPK G LSIRCARVGGVEIPN+KRV+YSLQYIHGIGR+ A +IL+DL MENKITKDLSE
Sbjct: 35  NPPKAGSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSNARQILSDLSMENKITKDLSE 94

Query: 356 EELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 532
           EELI LRDEVSKY IEGDLRRFNAL IRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL
Sbjct: 95  EELIILRDEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  217 bits (553), Expect = 2e-54
 Identities = 106/119 (89%), Positives = 113/119 (94%)
 Frame = +2

Query: 176 NPPKVGGLSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSE 355
           NPPKV  LSIRCARVGGVEIPN+KRV+YSLQYIHGIGR+ A +IL+DL MENKITKDLSE
Sbjct: 35  NPPKVCSLSIRCARVGGVEIPNSKRVEYSLQYIHGIGRSIARQILSDLTMENKITKDLSE 94

Query: 356 EELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 532
           +ELITLRDEVSKYMIEGDLRRFNAL IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 95  DELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 153


>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
           gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 290

 Score =  214 bits (546), Expect = 1e-53
 Identities = 103/115 (89%), Positives = 111/115 (96%)
 Frame = +2

Query: 188 VGGLSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELI 367
           V GLSIRCARVGGVEIPNNKR++YSLQYIHG+GR+RA +IL+DL MENKITK+LSEEELI
Sbjct: 161 VHGLSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSEEELI 220

Query: 368 TLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTL 532
           TLRDEVSKYMIEGDLRRFNAL IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTL
Sbjct: 221 TLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTL 275



 Score =  120 bits (301), Expect = 3e-25
 Identities = 61/109 (55%), Positives = 80/109 (73%)
 Frame = +2

Query: 203 IRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKMENKITKDLSEEELITLRDE 382
           ++C RVG  EIP++K+++++LQ+I GIGR RA +IL DL +ENK TKDL+  EL TLR+E
Sbjct: 33  VQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTLRNE 92

Query: 383 VSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRT 529
           VSKY+I  +L R     I+RL +IQCYRG  H   LPCRGQ T+ N RT
Sbjct: 93  VSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNART 141


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