BLASTX nr result
ID: Atractylodes21_contig00006842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00006842
(426 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi... 94 3e-21
ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat... 84 8e-18
ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containi... 83 1e-16
ref|XP_002520999.1| pentatricopeptide repeat-containing protein,... 88 6e-16
ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-15
>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product
[Vitis vinifera]
Length = 627
Score = 93.6 bits (231), Expect(2) = 3e-21
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = +2
Query: 107 G*GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDK 286
G G+ PN+VCY +ID+LCKDGL+ K ELFLEMK R ISPDVVAY+S+IHG+ ++ +
Sbjct: 229 GFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGR 288
Query: 287 LDEAKCLFIEMINDEGCPSVM 349
+ AK LF EM+++ P+V+
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVV 309
Score = 33.1 bits (74), Expect(2) = 3e-21
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 19 HNVAYTSLVKGLFMRDKIVKANRLFKKTIRLGF 117
+ V +TSLVKGL + +I +A L +K +R+G+
Sbjct: 161 NTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +2
Query: 125 NPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKC 304
+PNVV ++VLID LCK G + + N L M R SPD Y +LI G ++D+A+
Sbjct: 305 HPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARD 364
Query: 305 LFIEM 319
LF+ M
Sbjct: 365 LFVSM 369
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +2
Query: 125 NPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKC 304
+P+ Y+ LID C +G + +LF+ M+S+ I D V+Y LI+G S ++ EAK
Sbjct: 340 SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKK 399
Query: 305 LFIEMINDEGCPSVM 349
L+ EM+ E P+V+
Sbjct: 400 LYREMMCKEIMPTVI 414
Score = 55.5 bits (132), Expect = 5e-06
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P++ ++ LID LCK + ELF + + P+V+ YT +IHGL S +L+ AK L
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540
Query: 308 FIEMINDEGC 337
F+ M ++GC
Sbjct: 541 FLGM-EEKGC 549
>ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 83.6 bits (205), Expect(2) = 8e-18
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P ++ YS++ID LCKD + ELF EMK++ I PDV++YT+LIHG S K +
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWE 354
Query: 293 EAKCLFIEMIN-----DEGCPSVMIDV 358
+AKCLF EM++ D SV+ID+
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDM 381
Score = 31.6 bits (70), Expect(2) = 8e-18
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V Y++L+KGL M+ +I +A RLF +LG
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Score = 83.2 bits (204), Expect(2) = 3e-17
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P +V YS++ID LCKD + ELF EMK++ + PDV++YTSLIHG S K +
Sbjct: 114 GIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWE 173
Query: 293 EAKCLFIEMI-----NDEGCPSVMIDV 358
+AKCLF EM+ +D S++ID+
Sbjct: 174 KAKCLFNEMLDVGIRSDVTTSSMLIDI 200
Score = 30.0 bits (66), Expect(2) = 3e-17
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V Y++L+KGL M+ +I +A +LF +LG
Sbjct: 46 VTYSTLIKGLCMKHRISEATQLFMSMKKLG 75
Score = 78.2 bits (191), Expect(2) = 3e-16
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C PN + YS++ID LCK G + ELF EMK+ + PDV++YTSLIHG S K
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535
Query: 293 EAKCLFIEMIN-----DEGCPSVMIDV 358
+AK LF EM++ D SV+ID+
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDM 562
Score = 31.6 bits (70), Expect(2) = 3e-16
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V T+LVKGL M+ +I KA +LF K +LG
Sbjct: 408 VTCTTLVKGLCMKHRISKATQLFLKMQKLG 437
Score = 73.9 bits (180), Expect = 1e-11
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P+V+ YS++ID LCK G + ELF EMK+ + P+V++YTSLIHG S KL++AK L
Sbjct: 662 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 721
Query: 308 FIEMINDEG 334
F EM+ D+G
Sbjct: 722 FNEMV-DQG 729
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P+V +SVLID LCK+G V + NEL M R P+ V YT+L+ GL +D++ EA L
Sbjct: 551 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 610
Query: 308 FIEM 319
F++M
Sbjct: 611 FMKM 614
>ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 83.2 bits (204), Expect(2) = 1e-16
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P ++ YS++ID LCKD + ELF EMK++ + PDV++YTSLIHG +S K +
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217
Query: 293 EAKCLFIEMIN-----DEGCPSVMIDV 358
+AKCLF EM++ D V+ID+
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDM 244
Score = 83.2 bits (204), Expect(2) = 1e-16
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P ++ YS++ID LCKD + ELF EMK++ I PDV++YT+LIHG S K +
Sbjct: 451 GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWE 510
Query: 293 EAKCLFIEMIN-----DEGCPSVMIDV 358
+AKCLF EM++ D SV+ID+
Sbjct: 511 KAKCLFNEMLDVGIQPDVTTSSVLIDM 537
Score = 27.7 bits (60), Expect(2) = 1e-16
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V Y++L+KGL M +I +A LF +LG
Sbjct: 90 VTYSTLIKGLCMEHRISEATWLFMSMQKLG 119
Score = 27.7 bits (60), Expect(2) = 1e-16
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V Y++L+KGL M +I +A LF +LG
Sbjct: 383 VTYSTLIKGLCMEHRISEATWLFMSMQKLG 412
Score = 78.2 bits (191), Expect(2) = 3e-16
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C PN + YS++ID LCK G + ELF EMK+ + PDV++YTSLIHG S K
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691
Query: 293 EAKCLFIEMIN-----DEGCPSVMIDV 358
+AK LF EM++ D SV+ID+
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDM 718
Score = 31.6 bits (70), Expect(2) = 3e-16
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V T+LVKGL M+ +I KA +LF K +LG
Sbjct: 564 VTCTTLVKGLCMKHRISKATQLFLKMQKLG 593
Score = 73.9 bits (180), Expect = 1e-11
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P+V+ YS++ID LCK G + ELF EMK+ + P+V++YTSLIHG S KL++AK L
Sbjct: 818 PDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHL 877
Query: 308 FIEMINDEG 334
F EM+ D+G
Sbjct: 878 FNEMV-DQG 885
Score = 52.4 bits (124), Expect(2) = 3e-08
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 113 GLFC-NPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKL 289
G+ C P+V S+LID LCK+G V + NEL M R D+V Y++LI GL ++
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI 398
Query: 290 DEAKCLFIEM 319
EA LF+ M
Sbjct: 399 SEATWLFMSM 408
Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V Y++L+KGL M+ +I +A +LF +LG
Sbjct: 271 VTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P+V +SVLID LCK+G V + NEL M R P+ V YT+L+ GL +D++ EA L
Sbjct: 707 PDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQL 766
Query: 308 FIEM 319
F++M
Sbjct: 767 FMKM 770
Score = 55.8 bits (133), Expect = 3e-06
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 122 CNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAK 301
C ++V YS LI LC +S+ +LF+ MK PD +AY +L+ GL + K++ A
Sbjct: 266 CILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIAL 325
Query: 302 CLFIEMINDE---GCPSVMIDVTNPSL 373
L EM+ND G + DVT S+
Sbjct: 326 HLHQEMLNDTSQYGIKCIRPDVTTSSM 352
>ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539836|gb|EEF41416.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 628
Score = 88.2 bits (217), Expect = 6e-16
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P VV YS +ID+LCKDGLV + E F+EMK + I P+VV YTSL+HGL + + +
Sbjct: 246 GINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWE 305
Query: 293 EAKCLFIEMINDEGCPSVM 349
EAK LFIEM++ P V+
Sbjct: 306 EAKRLFIEMVDHGLLPDVV 324
Score = 52.0 bits (123), Expect(2) = 4e-06
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
P+VV +SVLI LCK G V + + LF M R + P Y LI G + +DE K +
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKI 380
Query: 308 FIEMIN-----DEGCPSVMI 352
F+ M+N D G S+++
Sbjct: 381 FLSMVNKRCQHDAGSYSILM 400
Score = 23.5 bits (49), Expect(2) = 4e-06
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 10 IWVHNVAYTSLVKGLFMRDKIVKANRLFKKTIRLGFV 120
I+ + V YTSL+ GL + +A RLF + + G +
Sbjct: 284 IFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLL 320
>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 74.7 bits (182), Expect(2) = 1e-15
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 113 GLFCNPNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLD 292
G+ C P V+ YS++ID LCK G + ELF EMK++ + PDV++Y++LIHG + K D
Sbjct: 230 GVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD 289
Query: 293 EAKCLFIEMINDEGCPSVMI 352
++K LF EM+ D+G M+
Sbjct: 290 QSKHLFDEMV-DQGVQPDMV 308
Score = 32.7 bits (73), Expect(2) = 1e-15
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 25 VAYTSLVKGLFMRDKIVKANRLFKKTIRLG 114
V YT+L+KGL M +I +A RLF + +LG
Sbjct: 162 VTYTTLIKGLCMEHRISEATRLFLRMQKLG 191
Score = 58.2 bits (139), Expect = 7e-07
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +2
Query: 128 PNVVCYSVLIDNLCKDGLVSKENELFLEMKSRKISPDVVAYTSLIHGLVYSDKLDEAKCL 307
PN++ Y+ LID C G ++ ELFL M S+ + PD ++YT+LI+G + K+ EA L
Sbjct: 340 PNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNL 399
Query: 308 FIEMINDEGCPSV 346
+ EM+ P+V
Sbjct: 400 YNEMLQVGKSPNV 412