BLASTX nr result
ID: Atractylodes21_contig00006807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00006807
(1833 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2... 684 0.0
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 672 0.0
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 671 0.0
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 669 0.0
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 663 0.0
>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
predicted protein [Populus trichocarpa]
Length = 2157
Score = 684 bits (1764), Expect = 0.0
Identities = 344/439 (78%), Positives = 371/439 (84%), Gaps = 1/439 (0%)
Frame = +1
Query: 250 PRKEYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNP 429
PRKEYYKKFL+EAFPVES DN NAEVV VI NKQDAVDYLTWTF YRRLTQNP
Sbjct: 1720 PRKEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFTYRRLTQNP 1779
Query: 430 NYYNLQGVSQRHLSDHLSELVENTLSDLEASKCVTIEEDFDLSPLNLGMIAXXXXXXXXX 609
NYYNLQGVS RHLSDHLSELVENTL+DLE SKCV IEED DLSPLNLGMIA
Sbjct: 1780 NYYNLQGVSHRHLSDHLSELVENTLTDLERSKCVAIEEDMDLSPLNLGMIASYYYISYTT 1839
Query: 610 XERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADPH 789
ERF EIL+SASEY QLP+RPGEEE +RRLI+HQRFSFENP+YADPH
Sbjct: 1840 IERFSSSLTPKTKMKGLLEILSSASEYAQLPIRPGEEEVLRRLINHQRFSFENPRYADPH 1899
Query: 790 VKANALLQAHFSRQMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVSQM 969
VKAN LLQAHFSRQ VGGNL DQ+EVLLS SRLLQAMVDVI MEVSQM
Sbjct: 1900 VKANVLLQAHFSRQSVGGNLALDQREVLLSGSRLLQAMVDVISSNGWLSLALLAMEVSQM 1959
Query: 970 VTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQLM 1149
VTQGMWERDS+LLQLPHFTKD+AKRCQENPG+SIETVFDLVEMEDDERRELLQMSDSQL+
Sbjct: 1960 VTQGMWERDSMLLQLPHFTKDMAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLL 2019
Query: 1150 DIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEE 1329
DI +FCNRFPNID+SY+V+D DNVRAG+D TLLVTLERDLEGRTEVGPVD+PRYPKAKEE
Sbjct: 2020 DIVRFCNRFPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVGPVDSPRYPKAKEE 2079
Query: 1330 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDSYMGCDQEY 1509
GWWLVVGDTKSNQLLAIKRVSLQRKSKVKL+ AP++ G+KS+TLYFMCDSY+GCDQEY
Sbjct: 2080 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLE-FAAPADTGRKSYTLYFMCDSYLGCDQEY 2138
Query: 1510 SFSVDV-KAAAPDDDSGRE 1563
+FSVDV +AA PD+DSGRE
Sbjct: 2139 NFSVDVGEAAGPDEDSGRE 2157
Score = 89.4 bits (220), Expect = 3e-15
Identities = 89/424 (20%), Positives = 174/424 (41%), Gaps = 12/424 (2%)
Frame = +1
Query: 259 EYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNPNYY 438
+YY + + P+ES D LNAE+V+ + N ++A +L +T++Y R+ +NP Y
Sbjct: 881 QYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMLRNPTLY 940
Query: 439 NL-QGVSQRH--LSDHLSELVENTLSDLEASKCVTIEEDFD-LSPLNLGMIAXXXXXXXX 606
L V R L + ++L+ + + L+ + V + +LG IA
Sbjct: 941 GLAPDVLTRDITLEERRADLIHSAAAILDKNNLVKYDRKSGYFQGTDLGRIASYYYITHG 1000
Query: 607 XXERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADP 786
+ + + + E++ + VR E+ + +L+ + +P
Sbjct: 1001 TISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEP 1059
Query: 787 HVKANALLQAHFSR-QMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVS 963
K N LLQA+ S+ ++ G +L SD + SA RL++A+ +++ + +
Sbjct: 1060 SAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLC 1119
Query: 964 QMVTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQ 1143
+MV + MW + L Q ++ + E S + +DL E E +M +
Sbjct: 1120 KMVNKRMWSVQTPLRQFHGIPNEILMKL-EKKDLSWDRYYDLKPQEIGELIRFPKMGRT- 1177
Query: 1144 LMDIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAK 1323
+ KF ++FP ++L+ V + T+ + + V P
Sbjct: 1178 ---LYKFIHQFPKLNLAAHVQPITRTVLRVELTITADFQWEDNVHGYVEP---------- 1224
Query: 1324 EEGWWLVVGDTKSNQLL-----AIKRVSLQRKSKVKLD-NITAP-SEPGKKSFTLYFMCD 1482
+W++V D + +L +K+ + V L N T P EP + + + D
Sbjct: 1225 ---FWVIVEDNDGDYILHHEYFMLKKQYVDEHQVVDLTLNFTVPIYEPLPPQYFIRVVSD 1281
Query: 1483 SYMG 1494
++G
Sbjct: 1282 KWLG 1285
Score = 83.2 bits (204), Expect = 2e-13
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 3 LRAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLV 125
L AHLVVVMGTQYYDG+ENAHTDYPVTDLLQMMGHASRPL+
Sbjct: 1667 LSAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLL 1707
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 672 bits (1734), Expect = 0.0
Identities = 340/436 (77%), Positives = 368/436 (84%), Gaps = 1/436 (0%)
Frame = +1
Query: 250 PRKEYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNP 429
PRKEYYKKFL+EAFPVES DNLNAE+VV VI NKQDAVDYLTWTFMYRRLTQNP
Sbjct: 1743 PRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNP 1802
Query: 430 NYYNLQGVSQRHLSDHLSELVENTLSDLEASKCVTIEEDFDLSPLNLGMIAXXXXXXXXX 609
NYYNLQGVS RHLSDHLSE VENTLSDLEASKCV IE+D DLSPLNLGMIA
Sbjct: 1803 NYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTT 1862
Query: 610 XERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADPH 789
ERF EILASASEY Q+P+RPGEE+ IRRLI+HQRFSFENPK DPH
Sbjct: 1863 IERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPH 1922
Query: 790 VKANALLQAHFSRQMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVSQM 969
+KANALLQAHFSRQ+VGGNL DQ+EVLLSA RLLQAMVDVI MEVSQM
Sbjct: 1923 IKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQM 1982
Query: 970 VTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQLM 1149
VTQGMWERDS+LLQLPHFTKDLAKRCQENPG+SIETVFDLVEMEDDERRELLQMSDSQL+
Sbjct: 1983 VTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLL 2042
Query: 1150 DIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEE 1329
DIA+FCNRFPNID++Y+VLDS+N+RAGDD TL V LERDLEGRTEVG VDAPRYPKAKEE
Sbjct: 2043 DIARFCNRFPNIDITYEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEE 2102
Query: 1330 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDSYMGCDQEY 1509
GWWLVVGDTKSNQLLAIKRV+LQRKSKVKL+ P+E G+KS+TLYFMCDSY+GCDQEY
Sbjct: 2103 GWWLVVGDTKSNQLLAIKRVALQRKSKVKLE-FAVPAEAGRKSYTLYFMCDSYLGCDQEY 2161
Query: 1510 SFSVDV-KAAAPDDDS 1554
SFSVDV A+ P++DS
Sbjct: 2162 SFSVDVMDASGPEEDS 2177
Score = 89.7 bits (221), Expect = 2e-15
Identities = 86/420 (20%), Positives = 174/420 (41%), Gaps = 8/420 (1%)
Frame = +1
Query: 259 EYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNPNYY 438
+YY + + P+ES D LNAE+V+ + N ++A ++ +T++Y R+ +NP Y
Sbjct: 908 QYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLY 967
Query: 439 NLQGVSQRH---LSDHLSELVENTLSDLEASKCVTIEEDFD-LSPLNLGMIAXXXXXXXX 606
L + L + ++L+ + L+ + V + +LG IA
Sbjct: 968 GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHG 1027
Query: 607 XXERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADP 786
+ + + + E++ + VR E+ + +L+ + +P
Sbjct: 1028 TISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEP 1086
Query: 787 HVKANALLQAHFSR-QMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVS 963
K N LLQA+ S+ ++ G +L SD + SA RL++A+ +++ + +
Sbjct: 1087 SAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLC 1146
Query: 964 QMVTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQ 1143
+MV + MW + L Q ++ + E + E +DL E E +M +
Sbjct: 1147 KMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQELGELIRYPKMGRT- 1204
Query: 1144 LMDIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAK 1323
+ KF ++FP +DL+ V + +T+ D + +V P
Sbjct: 1205 ---LHKFIHQFPKLDLAAHVQPITRT----VLRVELTITPDFQWEDKVHGFVEP------ 1251
Query: 1324 EEGWWLVVGDTKSNQLLAIKRVSLQRK--SKVKLDNITAP-SEPGKKSFTLYFMCDSYMG 1494
+W++V D +L + ++++ +V N T P EP + + + D ++G
Sbjct: 1252 ---FWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLG 1308
Score = 84.7 bits (208), Expect = 7e-14
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3
Query: 3 LRAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLV 125
L AHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPL+
Sbjct: 1690 LSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLL 1730
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 671 bits (1731), Expect = 0.0
Identities = 340/436 (77%), Positives = 367/436 (84%), Gaps = 1/436 (0%)
Frame = +1
Query: 250 PRKEYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNP 429
PRKEYYKKFL+EAFPVES DNLNAE+VV VI NKQDAVDYLTWTFMYRRLTQNP
Sbjct: 1710 PRKEYYKKFLYEAFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNP 1769
Query: 430 NYYNLQGVSQRHLSDHLSELVENTLSDLEASKCVTIEEDFDLSPLNLGMIAXXXXXXXXX 609
NYYNLQGVS RHLSDHLSE VENTLSDLEASKCV IE+D DLSPLNLGMIA
Sbjct: 1770 NYYNLQGVSHRHLSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTT 1829
Query: 610 XERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADPH 789
ERF EILASASEY Q+P+RPGEE+ IRRLI+HQRFSFENPK DPH
Sbjct: 1830 IERFSSSLTSKTKMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPH 1889
Query: 790 VKANALLQAHFSRQMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVSQM 969
+KANALLQAHFSRQ+VGGNL DQ+EVLLSA RLLQAMVDVI MEVSQM
Sbjct: 1890 IKANALLQAHFSRQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQM 1949
Query: 970 VTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQLM 1149
VTQGMWERDS+LLQLPHFTKDLAKRCQENPG+SIETVFDLVEMEDDERRELLQMSDSQL+
Sbjct: 1950 VTQGMWERDSMLLQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLL 2009
Query: 1150 DIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEE 1329
DIA+FCNRFPNID +Y+VLDS+N+RAGDD TL V LERDLEGRTEVG VDAPRYPKAKEE
Sbjct: 2010 DIARFCNRFPNIDXTYEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEE 2069
Query: 1330 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDSYMGCDQEY 1509
GWWLVVGDTKSNQLLAIKRV+LQRKSKVKL+ P+E G+KS+TLYFMCDSY+GCDQEY
Sbjct: 2070 GWWLVVGDTKSNQLLAIKRVALQRKSKVKLE-FAVPAEAGRKSYTLYFMCDSYLGCDQEY 2128
Query: 1510 SFSVDV-KAAAPDDDS 1554
SFSVDV A+ P++DS
Sbjct: 2129 SFSVDVMDASGPEEDS 2144
Score = 89.7 bits (221), Expect = 2e-15
Identities = 86/420 (20%), Positives = 174/420 (41%), Gaps = 8/420 (1%)
Frame = +1
Query: 259 EYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNPNYY 438
+YY + + P+ES D LNAE+V+ + N ++A ++ +T++Y R+ +NP Y
Sbjct: 875 QYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLY 934
Query: 439 NLQGVSQRH---LSDHLSELVENTLSDLEASKCVTIEEDFD-LSPLNLGMIAXXXXXXXX 606
L + L + ++L+ + L+ + V + +LG IA
Sbjct: 935 GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHG 994
Query: 607 XXERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADP 786
+ + + + E++ + VR E+ + +L+ + +P
Sbjct: 995 TISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEP 1053
Query: 787 HVKANALLQAHFSR-QMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVS 963
K N LLQA+ S+ ++ G +L SD + SA RL++A+ +++ + +
Sbjct: 1054 SAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLC 1113
Query: 964 QMVTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQ 1143
+MV + MW + L Q ++ + E + E +DL E E +M +
Sbjct: 1114 KMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQELGELIRYPKMGRT- 1171
Query: 1144 LMDIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAK 1323
+ KF ++FP +DL+ V + +T+ D + +V P
Sbjct: 1172 ---LHKFIHQFPKLDLAAHVQPITRT----VLRVELTITPDFQWEDKVHGFVEP------ 1218
Query: 1324 EEGWWLVVGDTKSNQLLAIKRVSLQRK--SKVKLDNITAP-SEPGKKSFTLYFMCDSYMG 1494
+W++V D +L + ++++ +V N T P EP + + + D ++G
Sbjct: 1219 ---FWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLG 1275
Score = 84.7 bits (208), Expect = 7e-14
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3
Query: 3 LRAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLV 125
L AHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPL+
Sbjct: 1657 LSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLL 1697
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 669 bits (1725), Expect = 0.0
Identities = 337/435 (77%), Positives = 365/435 (83%), Gaps = 1/435 (0%)
Frame = +1
Query: 250 PRKEYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNP 429
PRKEYYKKFL+EAFPVES DN NAEVV VI NKQDAVDYLTWTFMYRRLTQNP
Sbjct: 1376 PRKEYYKKFLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNP 1435
Query: 430 NYYNLQGVSQRHLSDHLSELVENTLSDLEASKCVTIEEDFDLSPLNLGMIAXXXXXXXXX 609
NYYNLQGVS RHLSDHLSELVENTLSDLEASKCV IEED DLSPLNLGMIA
Sbjct: 1436 NYYNLQGVSHRHLSDHLSELVENTLSDLEASKCVAIEEDMDLSPLNLGMIASYYYISYTT 1495
Query: 610 XERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADPH 789
ERF EILASASEY QLP+RPGEEE +RRLI+HQRFSFENP+Y+DPH
Sbjct: 1496 IERFSSSLTSKTRMKGLLEILASASEYAQLPIRPGEEEVLRRLINHQRFSFENPRYSDPH 1555
Query: 790 VKANALLQAHFSRQMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVSQM 969
VKAN LLQAHFSR VGGNL DQ+EVLLS+SRLLQAMVDVI MEVSQM
Sbjct: 1556 VKANVLLQAHFSRHSVGGNLALDQREVLLSSSRLLQAMVDVISSNGWLSLALLAMEVSQM 1615
Query: 970 VTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQLM 1149
VTQGMWERDS+LLQLPHFTK+LAK+CQENPG+SIETVFDLVEMEDDERRELLQMS+S+L+
Sbjct: 1616 VTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSNSELL 1675
Query: 1150 DIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEE 1329
D+ +FCNRFPNID+SY+V+D ++VR GDD TL VTLERDLEGRTEVGPVDA RYPKAKEE
Sbjct: 1676 DVVRFCNRFPNIDMSYEVMDGEDVRMGDDITLQVTLERDLEGRTEVGPVDAARYPKAKEE 1735
Query: 1330 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDSYMGCDQEY 1509
GWWLVVGDTKSNQLLAIKRVSLQRKSKVKL+ APSE G+KS+TLYFMCDSY+GCDQEY
Sbjct: 1736 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLE-FAAPSETGRKSYTLYFMCDSYLGCDQEY 1794
Query: 1510 SFSVDVK-AAAPDDD 1551
SF+VDVK A PD+D
Sbjct: 1795 SFNVDVKEAGGPDED 1809
Score = 90.5 bits (223), Expect = 1e-15
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 5/320 (1%)
Frame = +1
Query: 259 EYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNPNYY 438
+YY + + P+ES D LNAE+V+ + N ++A ++L +T++Y R+ +NP Y
Sbjct: 541 QYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLY 600
Query: 439 NL-QGVSQRH--LSDHLSELVENTLSDLEASKCVTIEEDFD-LSPLNLGMIAXXXXXXXX 606
L V R L + ++L+ ++ + L+ + V + +LG IA
Sbjct: 601 GLAPDVLTRDITLEERRADLIHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHG 660
Query: 607 XXERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADP 786
+ + + + E++ + VR E+ + +L+ + +P
Sbjct: 661 TISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEP 719
Query: 787 HVKANALLQAHFSR-QMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVS 963
K N LLQA+ S+ ++ G +L SD + SA RLL+A+ +++ + +
Sbjct: 720 SAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLC 779
Query: 964 QMVTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQ 1143
+M+ + MW + L Q ++ + E + E +DL E E +M +
Sbjct: 780 KMINKRMWSVQTPLRQFNGIPNEILMKL-EKKDLAWERYYDLSSQEIGELIRFPKMGRT- 837
Query: 1144 LMDIAKFCNRFPNIDLSYDV 1203
+ KF ++FP ++L+ V
Sbjct: 838 ---LHKFIHQFPKLNLAAHV 854
Score = 84.7 bits (208), Expect = 7e-14
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3
Query: 3 LRAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLV 125
L AHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPL+
Sbjct: 1323 LAAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLL 1363
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 663 bits (1710), Expect = 0.0
Identities = 330/429 (76%), Positives = 360/429 (83%)
Frame = +1
Query: 250 PRKEYYKKFLFEAFPVESXXXXXXXDNLNAEVVVEVIANKQDAVDYLTWTFMYRRLTQNP 429
PRKEYYKKFL+EAFPVES DNLNAE+V +I NKQDAVDYLTWTFMYRRLTQNP
Sbjct: 1792 PRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNP 1851
Query: 430 NYYNLQGVSQRHLSDHLSELVENTLSDLEASKCVTIEEDFDLSPLNLGMIAXXXXXXXXX 609
NYYNLQGVS RHLSDHLSE+VENTLSDLEASKCV+IE+D DLSPLNLGMIA
Sbjct: 1852 NYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCVSIEDDMDLSPLNLGMIASYYYISYTT 1911
Query: 610 XERFXXXXXXXXXXXXXXEILASASEYEQLPVRPGEEESIRRLIHHQRFSFENPKYADPH 789
ERF E+L+SASEY LP+RPGEEE +RRLI+HQRFSFENPK DPH
Sbjct: 1912 IERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEEEVVRRLINHQRFSFENPKVTDPH 1971
Query: 790 VKANALLQAHFSRQMVGGNLGSDQQEVLLSASRLLQAMVDVIXXXXXXXXXXXXMEVSQM 969
VKANALLQAHFSRQ VGGNL DQ+EVLLSA+RLLQAMVDVI MEVSQM
Sbjct: 1972 VKANALLQAHFSRQSVGGNLSLDQREVLLSANRLLQAMVDVISSNGWLSMALLAMEVSQM 2031
Query: 970 VTQGMWERDSVLLQLPHFTKDLAKRCQENPGRSIETVFDLVEMEDDERRELLQMSDSQLM 1149
VTQGMWERDS+LLQLPHFTKDLAK+CQENPGRSIETVFDL+EMEDDERRELL M+DSQL+
Sbjct: 2032 VTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMEDDERRELLNMTDSQLL 2091
Query: 1150 DIAKFCNRFPNIDLSYDVLDSDNVRAGDDFTLLVTLERDLEGRTEVGPVDAPRYPKAKEE 1329
DIA+FCNRFPNIDLSY++LD+DNVRAGDD TL VTLERDLEG+TEVGPVDAPRYPKAKEE
Sbjct: 2092 DIARFCNRFPNIDLSYEILDNDNVRAGDDITLQVTLERDLEGKTEVGPVDAPRYPKAKEE 2151
Query: 1330 GWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDNITAPSEPGKKSFTLYFMCDSYMGCDQEY 1509
GWWLVVGDTK+N LLAIKRVSLQRK K KL+ AP++ GKKS+ LYFMCDSYMGCDQEY
Sbjct: 2152 GWWLVVGDTKTNMLLAIKRVSLQRKLKAKLE-FAAPADAGKKSYVLYFMCDSYMGCDQEY 2210
Query: 1510 SFSVDVKAA 1536
F++DVK A
Sbjct: 2211 GFTLDVKEA 2219
Score = 82.8 bits (203), Expect = 3e-13
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +3
Query: 3 LRAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLV 125
L AHLVVVMGTQYYDGRENA TDYPVTDLLQMMGHASRPLV
Sbjct: 1739 LSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLV 1779