BLASTX nr result

ID: Atractylodes21_contig00006788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006788
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]     84   5e-14
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...    82   1e-13
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788...    78   3e-12
ref|XP_002327893.1| predicted protein [Populus trichocarpa] gi|2...    78   3e-12

>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 55/143 (38%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
 Frame = -2

Query: 750 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
           DQD             FW+S M VMQG VTF                             
Sbjct: 175 DQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAML------ 228

Query: 570 XXXXXXXXXXXXXXQLFDRSGLLYGELARFVLRILGVRTKPNKVQXXXXXXXXXXPAQ-- 397
                         QLFDRSG+LYGELARFVLR+LGV+TKPNKV                
Sbjct: 229 --------------QLFDRSGMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHG 274

Query: 396 ----IEGPKAAPAGAWDGVWGNN 340
               IEGPKAAP+  WD VWG+N
Sbjct: 275 NQNFIEGPKAAPSAGWDNVWGDN 297


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 54/143 (37%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
 Frame = -2

Query: 750 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
           DQD             FWIS +RVMQG V F                             
Sbjct: 188 DQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAML------ 241

Query: 570 XXXXXXXXXXXXXXQLFDRSGLLYGELARFVLRILGVRTKPNKVQ------XXXXXXXXX 409
                         QLFDR+GLLYGELARFVLR+LG++TKP KVQ               
Sbjct: 242 --------------QLFDRTGLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHG 287

Query: 408 XPAQIEGPKAAPAGAWDGVWGNN 340
               IEGPK AP+G WD VWG+N
Sbjct: 288 NQNYIEGPKGAPSGGWDNVWGDN 310


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 41/72 (56%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
 Frame = -2

Query: 528 QLFDRSGLLYGELARFVLRILGVRTKPNKVQ------XXXXXXXXXXPAQIEGPKAAPAG 367
           QLFDRSGLLYGELARF LR+LG+++KP KVQ                   IEGPKAAP+G
Sbjct: 67  QLFDRSGLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSG 126

Query: 366 AWDGVWGNNVHN 331
           AWD VWG+   N
Sbjct: 127 AWDNVWGDGTSN 138


>ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788885 [Glycine max]
          Length = 297

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 53/149 (35%), Positives = 62/149 (41%), Gaps = 10/149 (6%)
 Frame = -2

Query: 750 DQDXXXXXXXXXXXXXFWISLMRVMQGFVTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 571
           DQD             FWIS++RVMQG V F                             
Sbjct: 168 DQDPNDPFGAPPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQAFHLFMTALL------ 221

Query: 570 XXXXXXXXXXXXXXQLFDRSGLLYGELARFVLRILGVRTKPNKVQXXXXXXXXXXPA--- 400
                         QLFDRSG+LYGELARFVLR+LG+RTK  KV                
Sbjct: 222 --------------QLFDRSGMLYGELARFVLRLLGIRTKSKKVYPPGPNGQPLLGPGPH 267

Query: 399 -------QIEGPKAAPAGAWDGVWGNNVH 334
                   IE PKAAP+G+WD VWGN+ +
Sbjct: 268 NPSGNVNYIEAPKAAPSGSWDNVWGNDAN 296


>ref|XP_002327893.1| predicted protein [Populus trichocarpa] gi|222837302|gb|EEE75681.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
 Frame = -2

Query: 528 QLFDRSGLLYGELARFVLRILGVRTKPNKVQXXXXXXXXXXPAQ--------IEGPKAAP 373
           QLFDRSG+LYGELARFVLR+LG+RTKP  V             +        IEGPKAAP
Sbjct: 213 QLFDRSGMLYGELARFVLRLLGIRTKPRMVNPQGPNGLPLPGPEGTNANSRYIEGPKAAP 272

Query: 372 AGAWDGVWGNN 340
           +G+WD VW N+
Sbjct: 273 SGSWDNVWEND 283


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