BLASTX nr result

ID: Atractylodes21_contig00006778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006778
         (2135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE63408.1| hypothetical protein OsJ_18220 [Oryza sativa Japo...    65   1e-07
gb|EAY97707.1| hypothetical protein OsI_19628 [Oryza sativa Indi...    65   1e-07
ref|NP_001174384.1| Os05g0359000 [Oryza sativa Japonica Group] g...    65   1e-07
gb|ABA96306.1| transposon protein, putative, CACTA, En/Spm sub-c...    63   3e-07
gb|AAM18162.1|AC092172_22 Putative retrotransposable elements TN...    63   3e-07

>gb|EEE63408.1| hypothetical protein OsJ_18220 [Oryza sativa Japonica Group]
          Length = 532

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = -1

Query: 578 RSRISILEPAWNKLDKQELHQLWLAIKNQWNIP---NDDPKASTLRIANMAWKNFKKCLV 408
           RS+I I    W K+   E   LW  +K  + IP   +D  +   L      WKNFK  L 
Sbjct: 105 RSKIKITYKDWKKVPNTEKTVLWETMKGMFEIPESAHDSVQRQALLKIGKVWKNFKSELY 164

Query: 407 RKYVNTNTNPCKCKDYEACFDEKTWKEFVARKTTT*FKAKSERGRANARLNKNPHRL 237
           +KYV  +  P   K+     D+  W EFV R  T  F  +SE  +A +  N +PHRL
Sbjct: 165 KKYVKQDRTPFHDKELAHLRDQ--WNEFVQRCQTPEFLHQSEVNKALSACNTHPHRL 219


>gb|EAY97707.1| hypothetical protein OsI_19628 [Oryza sativa Indica Group]
          Length = 512

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = -1

Query: 578 RSRISILEPAWNKLDKQELHQLWLAIKNQWNIP---NDDPKASTLRIANMAWKNFKKCLV 408
           RS+I I    W K+   E   LW  +K  + IP   +D  +   L      WKNFK  L 
Sbjct: 85  RSKIKITYKDWKKVPNTEKTVLWETMKGMFEIPESAHDSVQRQALLKIGKVWKNFKSELY 144

Query: 407 RKYVNTNTNPCKCKDYEACFDEKTWKEFVARKTTT*FKAKSERGRANARLNKNPHRL 237
           +KYV  +  P   K+     D+  W EFV R  T  F  +SE  +A +  N +PHRL
Sbjct: 145 KKYVKQDRTPFHDKELAHLRDQ--WNEFVQRCQTPEFLHQSEVNKALSACNTHPHRL 199


>ref|NP_001174384.1| Os05g0359000 [Oryza sativa Japonica Group]
           gi|47777410|gb|AAT38044.1| unknown protein [Oryza sativa
           Japonica Group] gi|255676297|dbj|BAH93112.1|
           Os05g0359000 [Oryza sativa Japonica Group]
          Length = 602

 Score = 64.7 bits (156), Expect = 1e-07
 Identities = 41/117 (35%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = -1

Query: 578 RSRISILEPAWNKLDKQELHQLWLAIKNQWNIP---NDDPKASTLRIANMAWKNFKKCLV 408
           RS+I I    W K+   E   LW  +K  + IP   +D  +   L      WKNFK  L 
Sbjct: 175 RSKIKITYKDWKKVPNTEKTVLWETMKGMFEIPESAHDSVQRQALLKIGKVWKNFKSELY 234

Query: 407 RKYVNTNTNPCKCKDYEACFDEKTWKEFVARKTTT*FKAKSERGRANARLNKNPHRL 237
           +KYV  +  P   K+     D+  W EFV R  T  F  +SE  +A +  N +PHRL
Sbjct: 235 KKYVKQDRTPFHDKELAHLRDQ--WNEFVQRCQTPEFLHQSEVNKALSACNTHPHRL 289


>gb|ABA96306.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 876

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
 Frame = -1

Query: 590 GMKTRSRISILEPAWNKLDKQELHQLWLAIKNQWNIP---NDDPKASTLRIANMAWKNFK 420
           G+  R    IL     K+ + E  + W A++  +  P    D  K   L+    AWKN+K
Sbjct: 103 GIAARENFGILHKDIGKITEAEKERAWTAMEKWFTFPAEAKDRLKRKALQKMGKAWKNWK 162

Query: 419 KCLVRKYVNTNTNPCKCKDYEACFDEKTWKEFVARKTTT*FKAKSERGRANARLNKNPHR 240
             L  +YVN   N     +Y     E  W+EF + KTT  F+  SE  R   + N++PHR
Sbjct: 163 SKLFTEYVNPPGNHTPFDEYPQ-ITEAVWEEFCSLKTTQEFRESSEAHRVLQQRNEHPHR 221

Query: 239 L 237
           L
Sbjct: 222 L 222


>gb|AAM18162.1|AC092172_22 Putative retrotransposable elements TNP2 [Oryza sativa Japonica
           Group] gi|110288834|gb|ABB47043.2| transposon protein,
           putative, CACTA, En/Spm sub-class [Oryza sativa Japonica
           Group]
          Length = 738

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
 Frame = -1

Query: 590 GMKTRSRISILEPAWNKLDKQELHQLWLAIKNQWNIP---NDDPKASTLRIANMAWKNFK 420
           G+  R + SIL+  +  +   E   +WL  K  ++ P    D  + +  ++   AWKNFK
Sbjct: 51  GVIGRQKFSILQDDFKLVPAAEKDIVWLTFKESFDYPAEHEDHLRRAAFKVMGTAWKNFK 110

Query: 419 KCLVRKYVNTNTNPCKCKDYEACFDEKTWKEFVARKTTT*FKAKSERGRANARLNKNPHR 240
             LV ++V    NP   + +     E+ W+EF A+K+T   +A+SE  R     N++PHR
Sbjct: 111 TKLVGEFVYNPANPDPREKFP-WITEQVWEEFHAKKSTPESRARSEAYRLLQTRNQHPHR 169

Query: 239 L 237
           L
Sbjct: 170 L 170


Top