BLASTX nr result

ID: Atractylodes21_contig00006697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006697
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   535   e-150
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   525   e-146
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   520   e-145
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   512   e-143

>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  535 bits (1379), Expect = e-150
 Identities = 277/396 (69%), Positives = 302/396 (76%), Gaps = 6/396 (1%)
 Frame = -2

Query: 1377 QQWVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMSYXXXXXXXXXXXXXXXQXXXXXXGE 1198
            QQW+AMQYP            P   +YP   H+++Y               Q       +
Sbjct: 27   QQWMAMQYPAAAMVMQHQMMPPQ--HYP--QHFVAYHHQPHQYQHQHQQQHQQQQGSNAD 82

Query: 1197 NRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKVL 1018
            NR IWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKVL
Sbjct: 83   NRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVL 142

Query: 1017 QTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKYP 838
            Q Y  V+MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KYP
Sbjct: 143  QGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYP 202

Query: 837  SVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSAY 658
            SVKAAKVV D NTGRSKGYGFVRFGD+NER+QAM+EMNG YCSSRPMRIGAATPRKSS Y
Sbjct: 203  SVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 262

Query: 657  QQ-----GGYMSNGGS-QSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVG 496
            QQ     GGY SNG S QS+GD  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVG
Sbjct: 263  QQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 322

Query: 495  KGCGFVQFANRNNAEEALQKLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXX 316
            KGCGFVQFANRNNAE+ALQKLNGT IGKQTVRLSWGRNPANKQ+R DFGNQW  A     
Sbjct: 323  KGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 382

Query: 315  XXXXXXYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 208
                  YAL  PHDP+              HQQQVS
Sbjct: 383  VYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 418


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  525 bits (1351), Expect = e-146
 Identities = 272/390 (69%), Positives = 298/390 (76%)
 Frame = -2

Query: 1377 QQWVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMSYXXXXXXXXXXXXXXXQXXXXXXGE 1198
            QQW+AMQYP            P   +YP   H+++Y               Q       +
Sbjct: 27   QQWMAMQYPAAAMVMQHQMMPPQ--HYP--QHFVAYHHQPHQYQHQHQQQHQQQQGSNAD 82

Query: 1197 NRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKVL 1018
            NR IWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKVL
Sbjct: 83   NRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVL 142

Query: 1017 QTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKYP 838
            Q Y  V+MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KYP
Sbjct: 143  QGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYP 202

Query: 837  SVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSAY 658
            SVKAAKVV D NTGRSKGYGFVRFGD+NER+QAM+EMNG YCSSRPMRIGAATPRKSS Y
Sbjct: 203  SVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGY 262

Query: 657  QQGGYMSNGGSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKGCGFV 478
            QQ  Y S+   QS+GD  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKGCGFV
Sbjct: 263  QQ-QYSSH--VQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFV 319

Query: 477  QFANRNNAEEALQKLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXXXXXX 298
            QFANRNNAE+ALQKLNGT IGKQTVRLSWGRNPANKQ+R DFGNQW  A           
Sbjct: 320  QFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYG 379

Query: 297  YALQSPHDPSXXXXXXXXXXXXXTHQQQVS 208
            YAL  PHDP+              HQQQVS
Sbjct: 380  YALPPPHDPTMYAAAYGAYPVYGNHQQQVS 409


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  520 bits (1338), Expect = e-145
 Identities = 269/404 (66%), Positives = 299/404 (74%), Gaps = 13/404 (3%)
 Frame = -2

Query: 1380 QQQWVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMS-------YXXXXXXXXXXXXXXXQ 1222
            QQQW+AMQYP            P     P   HYM+       +                
Sbjct: 40   QQQWMAMQYPAAAMVMQHQMLPPQHYAPPPPQHYMTAYHQYHHHHPHPHQPQQHHQNQGS 99

Query: 1221 XXXXXXGENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFS 1042
                  GENR +W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG SEGYGFVEF++
Sbjct: 100  SGGGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYT 159

Query: 1041 HAAAEKVLQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLH 862
            HA AEKVLQ Y  ++MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLAADVTD+LLH
Sbjct: 160  HATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLH 219

Query: 861  ETFANKYPSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAA 682
            ETF ++YPSVKAAKVV D NTGRSKGYGFVRFGDDNERTQAM+EMNG YCSSR MRIGAA
Sbjct: 220  ETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAA 279

Query: 681  TPRKSSAYQ-QGGYMSNGGS----QSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEIL 517
            TPRKS+ YQ QGGY+SNG S    Q++GD  NTTIFVGGLDP V+DEDL+QPF+QYGEI+
Sbjct: 280  TPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIV 339

Query: 516  SVKIPVGKGCGFVQFANRNNAEEALQKLNGTPIGKQTVRLSWGRNPANK-QLRNDFGNQW 340
            SVKIPVGKGCGFVQFA+R+NAEEALQKLNGT IGKQTVRLSWGRNPANK QLR+DFGNQW
Sbjct: 340  SVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQW 399

Query: 339  PVAXXXXXXXXXXXYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 208
              A           YAL  PHDPS             +HQQQVS
Sbjct: 400  GGAYYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQQVS 443


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  513 bits (1322), Expect = e-143
 Identities = 269/404 (66%), Positives = 295/404 (73%), Gaps = 13/404 (3%)
 Frame = -2

Query: 1380 QQQWVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMS-----YXXXXXXXXXXXXXXXQXX 1216
            QQQW+ +QYP            P     P   HY++     Y               +  
Sbjct: 26   QQQWMPIQYPAAAMVMQHHIIPPQHYGPPPPQHYLAAAYHQYQPHHHHLPHVQQHTQKQQ 85

Query: 1215 XXXXGENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHA 1036
                GEN+ IW+GDLH+WMDE+YL SCF STGE+ASIKVIRNKQTG SEGYGFVEF +HA
Sbjct: 86   REGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHA 145

Query: 1035 AAEKVLQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHET 856
             AEKVLQ Y  ++MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLAADVTD+LL ET
Sbjct: 146  TAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQET 205

Query: 855  FANKYPSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATP 676
            F +KYPSVKAAKVV D NTGRSKGYGFVRFGDD+ERTQAM+EMNG YCSSRPMRIGAATP
Sbjct: 206  FVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATP 265

Query: 675  RKSSAY-QQGGYMSNG----GSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSV 511
            RKSS Y QQGGY SNG    G QS+GD NNTTIFVGGLDP V+DEDL+QPF+QYGEI+SV
Sbjct: 266  RKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSV 325

Query: 510  KIPVGKGCGFVQFANRNNAEEALQKLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVA 331
            KIPVGKGCGFVQFANR+NAEEALQKLNGT IGKQTVRLSWGRNPANKQ R DFG+ W  A
Sbjct: 326  KIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWNGA 385

Query: 330  XXXXXXXXXXXYALQSPHDPS---XXXXXXXXXXXXXTHQQQVS 208
                       YAL  PHDPS                +HQQQVS
Sbjct: 386  YYGGQVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQQVS 429


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  512 bits (1319), Expect = e-143
 Identities = 264/393 (67%), Positives = 287/393 (73%), Gaps = 3/393 (0%)
 Frame = -2

Query: 1377 QQWVAMQYPXXXXXXXXXXXAPSPANY---PVTPHYMSYXXXXXXXXXXXXXXXQXXXXX 1207
            QQWV MQYP            P P +Y   P  P++  Y                     
Sbjct: 19   QQWVPMQYPAAAAMVMPHHMLP-PQHYAPPPYVPYHHQYAAQPQHQHQNGSGG------- 70

Query: 1206 XGENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAE 1027
              EN+ IW+GDLH+WMDE+YL  CFASTGE++SIKVIRNKQTG SEGYGFVEF+SHA AE
Sbjct: 71   --ENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAE 128

Query: 1026 KVLQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFAN 847
            KVLQ Y  ++MPN EQPFRLNWATFS GDK S+N  DLSIFVGDLAADVTD+LLHETFA+
Sbjct: 129  KVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFAS 188

Query: 846  KYPSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKS 667
             YPSVKAAKVV D NTGRSKGYGFVRFGDDNERTQAM++MNG YCSSRPMRIGAATPRKS
Sbjct: 189  VYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKS 248

Query: 666  SAYQQGGYMSNGGSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKGC 487
            S +QQGG  +   +QSE D  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKGC
Sbjct: 249  SGHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGC 308

Query: 486  GFVQFANRNNAEEALQKLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXXX 307
            GFVQFANRNNAEEALQKLNGT IGKQTVRLSWGRNPANKQ R DFG+ W  A        
Sbjct: 309  GFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYD 368

Query: 306  XXXYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 208
               YAL   HDPS              HQQQVS
Sbjct: 369  GYGYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 401


Top