BLASTX nr result

ID: Atractylodes21_contig00006696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006696
         (1949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   525   e-146
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   524   e-146
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   516   e-144
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   509   e-141

>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  525 bits (1351), Expect = e-146
 Identities = 258/336 (76%), Positives = 280/336 (83%)
 Frame = -1

Query: 1424 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1245
            +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKV
Sbjct: 82   DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141

Query: 1244 LQTYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFSNKY 1065
            LQ Y  + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETF+ KY
Sbjct: 142  LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201

Query: 1064 PSVKAAKVVIDANTGRSKGYGFVRFGDDSERTQAMTEMNGTYCSSRPMRIGAATPRKXXX 885
            PSVKAAKVV DANTGRSKGYGFVRFGD++ER+QAMTEMNG YCSSRPMRIGAATPRK   
Sbjct: 202  PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRK--- 258

Query: 884  XXXXXXXXXXYMXXXXXXXXXXXXNTTIFVGGLDPTVSDEDLRQPFSQYGEIVSVKIPIG 705
                                    NTTIFVGGLDP VSDEDLRQPFSQYGEIVSVKIP+G
Sbjct: 259  -----SSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 313

Query: 704  KGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQLRNDFGNQWAGAYYGGH 525
            KGCGFVQFANRNNAE+ALQKLNGT IGKQTVRLSWGRNPANKQ+R DFGNQW+GAYYGG 
Sbjct: 314  KGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQ 373

Query: 524  IYDGYEYAMTPPHDPSXXXXXXXXXXXXGIHQQQVS 417
            +YDGY YA+ PPHDP+            G HQQQVS
Sbjct: 374  VYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 409


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  524 bits (1349), Expect = e-146
 Identities = 258/337 (76%), Positives = 280/337 (83%), Gaps = 1/337 (0%)
 Frame = -1

Query: 1424 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1245
            +NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKV
Sbjct: 82   DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141

Query: 1244 LQTYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFSNKY 1065
            LQ Y  + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETF+ KY
Sbjct: 142  LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201

Query: 1064 PSVKAAKVVIDANTGRSKGYGFVRFGDDSERTQAMTEMNGTYCSSRPMRIGAATPRK-XX 888
            PSVKAAKVV DANTGRSKGYGFVRFGD++ER+QAMTEMNG YCSSRPMRIGAATPRK   
Sbjct: 202  PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 261

Query: 887  XXXXXXXXXXXYMXXXXXXXXXXXXNTTIFVGGLDPTVSDEDLRQPFSQYGEIVSVKIPI 708
                                     NTTIFVGGLDP VSDEDLRQPFSQYGEIVSVKIP+
Sbjct: 262  YQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPV 321

Query: 707  GKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQLRNDFGNQWAGAYYGG 528
            GKGCGFVQFANRNNAE+ALQKLNGT IGKQTVRLSWGRNPANKQ+R DFGNQW+GAYYGG
Sbjct: 322  GKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGG 381

Query: 527  HIYDGYEYAMTPPHDPSXXXXXXXXXXXXGIHQQQVS 417
             +YDGY YA+ PPHDP+            G HQQQVS
Sbjct: 382  QVYDGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 418


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  516 bits (1330), Expect = e-144
 Identities = 255/337 (75%), Positives = 275/337 (81%), Gaps = 1/337 (0%)
 Frame = -1

Query: 1424 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1245
            ENRT+W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG SEGYGFVEF++HA AEKV
Sbjct: 107  ENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKV 166

Query: 1244 LQTYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFSNKY 1065
            LQ Y  I MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLAADVTD+LLHETF ++Y
Sbjct: 167  LQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRY 226

Query: 1064 PSVKAAKVVIDANTGRSKGYGFVRFGDDSERTQAMTEMNGTYCSSRPMRIGAATPRKXXX 885
            PSVKAAKVV DANTGRSKGYGFVRFGDD+ERTQAMTEMNG YCSSR MRIGAATPRK   
Sbjct: 227  PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRKSTG 286

Query: 884  XXXXXXXXXXYMXXXXXXXXXXXXNTTIFVGGLDPTVSDEDLRQPFSQYGEIVSVKIPIG 705
                                    NTTIFVGGLDP V+DEDL+QPFSQYGEIVSVKIP+G
Sbjct: 287  YQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVG 346

Query: 704  KGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANK-QLRNDFGNQWAGAYYGG 528
            KGCGFVQFA+R+NAEEALQKLNGT IGKQTVRLSWGRNPANK QLR+DFGNQW GAYYGG
Sbjct: 347  KGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYYGG 406

Query: 527  HIYDGYEYAMTPPHDPSXXXXXXXXXXXXGIHQQQVS 417
             IYDGY YA+ PPHDPS            G HQQQVS
Sbjct: 407  QIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQQVS 443


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  513 bits (1320), Expect = e-143
 Identities = 255/339 (75%), Positives = 271/339 (79%), Gaps = 3/339 (0%)
 Frame = -1

Query: 1424 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1245
            EN+TIW+GDLH+WMDE+YL SCF STGE+ASIKVIRNKQTG SEGYGFVEF +HA AEKV
Sbjct: 91   ENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKV 150

Query: 1244 LQTYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFSNKY 1065
            LQ Y  I MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLAADVTD+LL ETF +KY
Sbjct: 151  LQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKY 210

Query: 1064 PSVKAAKVVIDANTGRSKGYGFVRFGDDSERTQAMTEMNGTYCSSRPMRIGAATPRKXXX 885
            PSVKAAKVV DANTGRSKGYGFVRFGDDSERTQAMTEMNG YCSSRPMRIGAATPRK   
Sbjct: 211  PSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRKSSG 270

Query: 884  XXXXXXXXXXYMXXXXXXXXXXXXNTTIFVGGLDPTVSDEDLRQPFSQYGEIVSVKIPIG 705
                                    NTTIFVGGLDP V+DEDL+QPFSQYGEIVSVKIP+G
Sbjct: 271  YQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVG 330

Query: 704  KGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQLRNDFGNQWAGAYYGGH 525
            KGCGFVQFANR+NAEEALQKLNGT IGKQTVRLSWGRNPANKQ R DFG+ W GAYYGG 
Sbjct: 331  KGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWNGAYYGGQ 390

Query: 524  IYDGYEYAMTPPHDPSXXXXXXXXXXXXGI---HQQQVS 417
            +YDGY YA+ PPHDPS             I   HQQQVS
Sbjct: 391  VYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQQVS 429


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
            [Glycine max]
          Length = 425

 Score =  509 bits (1310), Expect = e-141
 Identities = 254/336 (75%), Positives = 272/336 (80%)
 Frame = -1

Query: 1424 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1245
            EN+TIW+GDLH+WMDE+YL  CFASTGE++SIKVIRNKQTG SEGYGFVEF+SHA AEKV
Sbjct: 95   ENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKV 154

Query: 1244 LQTYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFSNKY 1065
            LQ Y  I MPNTEQPFRLNWATFS GDK S+N  DLSIFVGDLAADVTD+LLHETF++ Y
Sbjct: 155  LQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVY 214

Query: 1064 PSVKAAKVVIDANTGRSKGYGFVRFGDDSERTQAMTEMNGTYCSSRPMRIGAATPRKXXX 885
            PSVKAAKVV DANTGRSKGYGFVRFGDD++RTQAMT+MNG YCSSRPMRIGAATPRK   
Sbjct: 215  PSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRK--- 271

Query: 884  XXXXXXXXXXYMXXXXXXXXXXXXNTTIFVGGLDPTVSDEDLRQPFSQYGEIVSVKIPIG 705
                                    NTTIFVGGLDP VSDEDLRQPFSQYGEIVSVKIP+G
Sbjct: 272  --SSGHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVG 329

Query: 704  KGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQLRNDFGNQWAGAYYGGH 525
            KGCGFVQFANRNNAEEALQKLNGT+IGKQTVRLSWGRNPANKQ R DFGN W GAYYG  
Sbjct: 330  KGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAP 389

Query: 524  IYDGYEYAMTPPHDPSXXXXXXXXXXXXGIHQQQVS 417
            +YDGY YA+TP HDPS            G HQQQVS
Sbjct: 390  MYDGYGYALTPRHDPSIYAAAYGAYPLYGGHQQQVS 425


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