BLASTX nr result

ID: Atractylodes21_contig00006678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006678
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23113.3| unnamed protein product [Vitis vinifera]              484   e-134
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    482   e-133
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       444   e-122
ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protei...   425   e-116

>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  484 bits (1247), Expect = e-134
 Identities = 254/389 (65%), Positives = 304/389 (78%), Gaps = 5/389 (1%)
 Frame = +3

Query: 87   RVAKLKQSSPVPFDIFIAQKTRVLVITGPNTGGKTIFLKTVGLAAMMAKSGLYVLSSEPV 266
            +V +L+QS PVP D FIAQ+TRVLVITGPNTGGKTI LKTVGLAAMMA+SGL+VL++EPV
Sbjct: 417  QVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPV 476

Query: 267  KMPWFDSVFADIGDEQSLSQSLSTFSGHLKRTXXXXXXXXXXXXXXXDEVGAGTNPLEGA 446
            ++PWFD VFADIGDEQSLSQSLSTFSGHLK+                DEVGAGTNPLEGA
Sbjct: 477  RIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGA 536

Query: 447  ALGMSLLECFAEAGALLTMATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYRILWGIP 626
            ALGMSLLE FAE GALLT+ATTHH ELKTLKYSNDAFENACMEFDEVNLKPTY+ILWGIP
Sbjct: 537  ALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIP 596

Query: 627  GRSNAINIAERLELPNVVIDHARELHGIASAEINEVIEDMEKFKQKLHEHIHEARHHLKL 806
            GRSNAINIAERL +P  V+D ARE +G ASAEINEVI DME+FKQ+  E +++AR++L L
Sbjct: 597  GRSNAINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLML 656

Query: 807  ARELHRNLQVTDRRISEHATSQRYKKIQEISNAGGVARSILHKKVRQLRAS---PNLASK 977
            +R+L+ NL VT R++ EH T+QRY K++E+S A  VARS+LHKKVRQLR+S   P+  + 
Sbjct: 657  SRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTA 716

Query: 978  ADPSRPMVTFNSQSSRTENDAVSTTMLSK--SNVKQQAQEKRRNVVKAGDMVHVCKLNKK 1151
            AD S+     ++Q +  + +   TT  SK  + V QQ+  +++ V K GDMVHV  L KK
Sbjct: 717  ADKSQHASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKK 776

Query: 1152 ATVLEVDPCKEEIVVQVGNMKLKLTAADV 1238
            ATVLEV+  K ++VVQ GNMKLKL   DV
Sbjct: 777  ATVLEVESSKGQLVVQAGNMKLKLKLTDV 805


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  482 bits (1240), Expect = e-133
 Identities = 253/385 (65%), Positives = 301/385 (78%), Gaps = 5/385 (1%)
 Frame = +3

Query: 99   LKQSSPVPFDIFIAQKTRVLVITGPNTGGKTIFLKTVGLAAMMAKSGLYVLSSEPVKMPW 278
            L+QS PVP D FIAQ+TRVLVITGPNTGGKTI LKTVGLAAMMA+SGL+VL++EPV++PW
Sbjct: 405  LEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPW 464

Query: 279  FDSVFADIGDEQSLSQSLSTFSGHLKRTXXXXXXXXXXXXXXXDEVGAGTNPLEGAALGM 458
            FD VFADIGDEQSLSQSLSTFSGHLK+                DEVGAGTNPLEGAALGM
Sbjct: 465  FDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGM 524

Query: 459  SLLECFAEAGALLTMATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYRILWGIPGRSN 638
            SLLE FAE GALLT+ATTHH ELKTLKYSNDAFENACMEFDEVNLKPTY+ILWGIPGRSN
Sbjct: 525  SLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSN 584

Query: 639  AINIAERLELPNVVIDHARELHGIASAEINEVIEDMEKFKQKLHEHIHEARHHLKLAREL 818
            AINIAERL +P  V+D ARE +G ASAEINEVI DME+FKQ+  E +++AR++L L+R+L
Sbjct: 585  AINIAERLGVPKKVLDKAREQYGAASAEINEVIIDMERFKQEFQERVNDARYYLMLSRDL 644

Query: 819  HRNLQVTDRRISEHATSQRYKKIQEISNAGGVARSILHKKVRQLRAS---PNLASKADPS 989
            + NL VT R++ EH T+QRY K++E+S A  VARS+LHKKVRQLR+S   P+  + AD S
Sbjct: 645  YENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTAADKS 704

Query: 990  RPMVTFNSQSSRTENDAVSTTMLSK--SNVKQQAQEKRRNVVKAGDMVHVCKLNKKATVL 1163
            +     ++Q +  + +   TT  SK  + V QQ+  +++ V K GDMVHV  L KKATVL
Sbjct: 705  QHASATSNQHTAADINERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGKKATVL 764

Query: 1164 EVDPCKEEIVVQVGNMKLKLTAADV 1238
            EV+  K ++VVQ GNMKLKL   DV
Sbjct: 765  EVESSKGQLVVQAGNMKLKLKLTDV 789


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
            predicted protein [Populus trichocarpa]
          Length = 864

 Score =  448 bits (1152), Expect = e-123
 Identities = 247/405 (60%), Positives = 292/405 (72%), Gaps = 22/405 (5%)
 Frame = +3

Query: 90   VAKLKQSSPVPFDIFIAQKTRVLVITGPNTGGKTIFLKTVGLAAMMAKSGLYVLSSEPVK 269
            V+ L Q+ PVP D FI+ KTRVL ITGPNTGGKTI LKTVGLAAMMAKSGL+VLSSE V+
Sbjct: 458  VSALDQARPVPVDFFISHKTRVLTITGPNTGGKTICLKTVGLAAMMAKSGLHVLSSESVE 517

Query: 270  MPWFDSVFADIGDEQSLSQSLSTFSGHLKRTXXXXXXXXXXXXXXXD-----EVGAGTNP 434
            +PWFDSVFADIGDEQSLSQSLSTFSGHLK+                       VGAGTNP
Sbjct: 518  IPWFDSVFADIGDEQSLSQSLSTFSGHLKQISIREFPWNLTDSPCRTFDLNPRVGAGTNP 577

Query: 435  LEGAALGMSLLECFAEAGALLTMATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYRIL 614
            LEGAALGMSLLE FA++GALLT+ATTHHGELK+LKYSNDAFENACMEFDEVNLKPTY+IL
Sbjct: 578  LEGAALGMSLLESFADSGALLTIATTHHGELKSLKYSNDAFENACMEFDEVNLKPTYKIL 637

Query: 615  WGIP--------------GRSNAINIAERLELPNVVIDHARELHGIASAEINEVIEDMEK 752
            WG+P              GRSNAINI+E+L LP+VV+ +ARELHG ASAEINEVI DME+
Sbjct: 638  WGVPVTILHNITAAVFPIGRSNAINISEKLGLPSVVVSNARELHGAASAEINEVIIDMER 697

Query: 753  FKQKLHEHIHEARHHLKLARELHRNLQVTDRRISEHATSQRYKKIQEISNAGGVARSILH 932
            FKQ   E +HEARHHL L++ LH  L++  R+I EH T QRY+K+++IS A  +ARSILH
Sbjct: 698  FKQDSQELLHEARHHLMLSKNLHEKLKLARRKIKEHGTEQRYRKMRQISEAASMARSILH 757

Query: 933  KKVRQLR--ASPNLASKADPSRPMVTFNSQSSRTENDAVSTTMLSKSNVKQQAQ-EKRRN 1103
            KKVRQLR  A+      AD  + + T +S+ +    +   T  +S S V+   Q      
Sbjct: 758  KKVRQLRAHATQTFQPTAD-QKQLSTSDSRFTAEAKNGRPTESMSTSVVEINKQPSAMTE 816

Query: 1104 VVKAGDMVHVCKLNKKATVLEVDPCKEEIVVQVGNMKLKLTAADV 1238
            + + GDMV V  L +KATVL VD  KEEI+VQ GNMKLKL  A++
Sbjct: 817  LPEVGDMVQVSSLGRKATVLRVDRSKEEILVQAGNMKLKLKLAEI 861


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  444 bits (1143), Expect = e-122
 Identities = 237/387 (61%), Positives = 288/387 (74%), Gaps = 5/387 (1%)
 Frame = +3

Query: 93   AKLKQSSPVPFDIFIAQKTRVLVITGPNTGGKTIFLKTVGLAAMMAKSGLYVLSSEPVKM 272
            A L  + PVP D  ++QKTRV+VITGPNTGGKTI LKTVGLAAMMAKSGLYVL+SE  ++
Sbjct: 403  AALDNAPPVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESAQI 462

Query: 273  PWFDSVFADIGDEQSLSQSLSTFSGHLKRTXXXXXXXXXXXXXXXDEVGAGTNPLEGAAL 452
            PWFDSVFADIGDEQSLSQSLSTFSGHLK+                DEVGAGTNPLEGAAL
Sbjct: 463  PWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPLEGAAL 522

Query: 453  GMSLLECFAEAGALLTMATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYRILWGIPGR 632
            GM+LLE FA+   LLTMATTHHGELKTLKYS++AFENACMEFDEVNLKPTY++LWG+PGR
Sbjct: 523  GMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLWGVPGR 582

Query: 633  SNAINIAERLELPNVVIDHARELHGIASAEINEVIEDMEKFKQKLHEHIHEARHHLKLAR 812
            SNAINIAERL LP+VV+D AR L+G ASAEI+EVI DME+ KQ+  E + EARH+L+ +R
Sbjct: 583  SNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHYLRHSR 642

Query: 813  ELHRNLQVTDRRISEHATSQRYKKIQEISNAGGVARSILHKKVRQLRAS---PNLASKAD 983
             L+ +L  T R+I E++T+ R+KK++++S A  +ARSILHKKVR+L AS   P+  +K  
Sbjct: 643  GLYNSLLNTRRKIIEYSTNLRFKKMRDVSEAAAMARSILHKKVRELDASAKQPSQNNKTI 702

Query: 984  PSRPMVTFNSQSSRTENDAVSTTMLSKSNVK--QQAQEKRRNVVKAGDMVHVCKLNKKAT 1157
             S  +   N   +  EN   +    S S+VK   +++  +    K GDMVHV  L K+ T
Sbjct: 703  SSSNLSATNKSQTVAENKEPTIADKSASSVKVFNRSRSDKSGPPKVGDMVHVSSLGKQVT 762

Query: 1158 VLEVDPCKEEIVVQVGNMKLKLTAADV 1238
            VL+VD  K EIVVQ GNMKLKL   D+
Sbjct: 763  VLKVDSSKGEIVVQAGNMKLKLKLTDI 789


>ref|XP_003574192.1| PREDICTED: LOW QUALITY PROTEIN: mutS2 protein-like [Brachypodium
            distachyon]
          Length = 833

 Score =  425 bits (1092), Expect = e-116
 Identities = 218/390 (55%), Positives = 281/390 (72%), Gaps = 4/390 (1%)
 Frame = +3

Query: 87   RVAKLKQSSPVPFDIFIAQKTRVLVITGPNTGGKTIFLKTVGLAAMMAKSGLYVLSSEPV 266
            RV+KL+++ P+P D  I ++T VLVITGPNTGGKTI LKTVGLA++MAK GLY+L+SEPV
Sbjct: 437  RVSKLERNHPIPVDFMIGEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPV 496

Query: 267  KMPWFDSVFADIGDEQSLSQSLSTFSGHLKRTXXXXXXXXXXXXXXXDEVGAGTNPLEGA 446
            K+PWFD+V+ADIGDEQSL+QSLSTFSGHLK+                DEVGAGTNPLEGA
Sbjct: 497  KIPWFDAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAQSTSQSLVLLDEVGAGTNPLEGA 556

Query: 447  ALGMSLLECFAEAGALLTMATTHHGELKTLKYSNDAFENACMEFDEVNLKPTYRILWGIP 626
            ALGMSLLE FAEAG+ LT+ATTHHGELKTLKYSND+FENAC+EFDE NLKPT+RILWGIP
Sbjct: 557  ALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNDSFENACVEFDEENLKPTFRILWGIP 616

Query: 627  GRSNAINIAERLELPNVVIDHARELHGIASAEINEVIEDMEKFKQKLHEHIHEARHHLKL 806
            GRSNAINIAERL LP  +I+ AR L G A AEIN +I DMEKFKQ+  E + +A+H+L  
Sbjct: 617  GRSNAINIAERLGLPLDIIESARHLLGTAGAEINALIMDMEKFKQEYDEQLQQAQHYLMQ 676

Query: 807  ARELHRNLQVTDRRISEHATSQRYKKIQEISNAGGVARSILHKKVRQLRASPNLASKADP 986
            +RELH NL+V  + + +H  +QR +K + +S    +ARSI+HKK +Q R S       + 
Sbjct: 677  SRELHNNLEVAQKNVMDHTIAQRKRKSRVVSEYAVMARSIIHKKFQQFRESAIAQRVLEE 736

Query: 987  SRPMVTFNSQSSR----TENDAVSTTMLSKSNVKQQAQEKRRNVVKAGDMVHVCKLNKKA 1154
             R +    S+  +    +   A+     + S++  +A ++   + + GD+V+V KL  +A
Sbjct: 737  ERAVEKAKSERVKGPEPSSTSAIKMAQNTNSSMATEANDEDGGIPEVGDLVYVPKLKNQA 796

Query: 1155 TVLEVDPCKEEIVVQVGNMKLKLTAADVVI 1244
            TV+++D  K E+ +Q G MKLKL   DVVI
Sbjct: 797  TVVKIDSSKNEVQIQAGMMKLKLKLKDVVI 826


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