BLASTX nr result

ID: Atractylodes21_contig00006670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006670
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
emb|CBI27550.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...    59   3e-07

>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -1

Query: 168 NIDFVIAKVQAGGTDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 19
           +IDF+IAKVQ G ++D +FQSLL D  C+++ +SH LV +LL  FKDDWK
Sbjct: 39  DIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 88


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -1

Query: 168 NIDFVIAKVQAGGTDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 19
           +IDF+IAKVQ G ++D +FQSLL D  C+++ +SH LV +LL  FKDDWK
Sbjct: 70  DIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWK 119


>emb|CBI27550.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = -1

Query: 186 CVGSPGNIDFVIAKVQAGGTDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 19
           C+ S   ID ++++++ G +DD +F+SL+HD+AC+A+P+S  LV  LL  FKDDWK
Sbjct: 40  CIRS--QIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWK 93


>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = -1

Query: 186 CVGSPGNIDFVIAKVQAGGTDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 19
           C+ S   ID ++++++ G +DD +F+SL+HD+AC+A+P+S  LV  LL  FKDDWK
Sbjct: 40  CIRS--QIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWK 93


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = -1

Query: 168 NIDFVIAKVQAGGTDDGIFQSLLHDQACSAMPVSHVLVCQLLCLFKDDWK 19
           +ID ++AK++ G + D I QSL+HD+ C+++ +SH LV +LL  FKDDWK
Sbjct: 17  DIDVIVAKIRVGSSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRFKDDWK 66


Top