BLASTX nr result

ID: Atractylodes21_contig00006665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006665
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   386   e-105
emb|CBI18269.3| unnamed protein product [Vitis vinifera]              379   e-102
ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002533876.1| zinc finger protein, putative [Ricinus commu...   363   9e-98
ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   360   8e-97

>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  386 bits (992), Expect = e-105
 Identities = 228/452 (50%), Positives = 279/452 (61%), Gaps = 20/452 (4%)
 Frame = +2

Query: 146  ISSSGVLANVVLTGNSVTLSFPDIVANFARPVNGSGEHGTLFLASPLDACSPLAKANSSI 325
            + +S   ANVVL GN+VTLSF DI ANFA+PV GSGE G L++A PLDACSPL  A   +
Sbjct: 16   LMASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDACSPLTNAVEKV 75

Query: 326  EDGINPPYVLIIRGGCHFADKVQRAQDAGFKAAIIYNNQDTN-LVAMAGNSAGIHIHAVF 502
            E G + P+VLI+RGGC F DKV+ AQ AGF AAI+Y+N+D   LVAMAGNSAGI IHAVF
Sbjct: 76   E-GASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVF 134

Query: 503  VSEETGLKLRKYVGRTEIQVWLMQNNENSAWSIMXXXXXXXXXXXXXXXTCFFVRKHPIR 682
            VS+ +G+ L+ Y G  ++++W++ + ENSAWSIM               TCFFVR+H IR
Sbjct: 135  VSKASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIR 194

Query: 683  RG-PRASRVREFNGMSRQLVKAMPSLIFTTALEDNCTSATCAICLEDYRVGDKLRILPCS 859
            R  PR SRVREF+GMS +LVKAMPSLIFTT LEDNCTS TCAICLEDY VG+KLRILPC 
Sbjct: 195  RQRPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLEDYNVGEKLRILPCR 254

Query: 860  HKFHSFCVDSWLTSWRTFCPVCKHDARTSIGDPPASERTXXXXXXXXXXXXXXXXXXXXM 1039
            HKFH+FCVDSWLTSWRTFCPVCK DARTS GDPP SE T                     
Sbjct: 255  HKFHAFCVDSWLTSWRTFCPVCKRDARTSTGDPP-SESTPLLSSSPGSLAPSSLVSSVRS 313

Query: 1040 QIS-----HLSPPVSYVHSISIAPDN--------QQSFQGCHESRHPSSSQTPLD-XXXX 1177
             ++     H++P  S  HS+S++ +N        QQS Q   +S   S S++ LD     
Sbjct: 314  SLASSSAIHIAPSPSPSHSLSVSRNNSLSATPYIQQSLQSYRQS-SLSVSRSSLDLRNAS 372

Query: 1178 XXXXXXXXXXXXNTFTCPSLSPLSSIYMSFYAXXXXXXXXXXXXXXXXXXXLC*LFSICF 1357
                        ++   PSLSPL+S Y+S Y                         S+ +
Sbjct: 373  SQRSHASYLVSPHSMGYPSLSPLNSRYLSPYIPSPSNA------------------SLSY 414

Query: 1358 IKLYSQ-SHPLCRTKSAASISP---AQSLPEC 1441
            +   S+  HPL  ++SA S SP   AQSLPEC
Sbjct: 415  VGSSSRPPHPLHYSESATSFSPYTSAQSLPEC 446


>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  379 bits (974), Expect = e-102
 Identities = 223/441 (50%), Positives = 270/441 (61%), Gaps = 12/441 (2%)
 Frame = +2

Query: 152  SSGVLANVVLTGNSVTLSFPDIVANFARPVNGSGEHGTLFLASPLDACSPLAKANSSIED 331
            +S   ANVVL GN+VTLSF DI ANFA+PV GSGE G L++A PLDACSPL  A   +E 
Sbjct: 2    ASVAFANVVLIGNNVTLSFDDIQANFAKPVKGSGECGILYVAEPLDACSPLTNAVEKVE- 60

Query: 332  GINPPYVLIIRGGCHFADKVQRAQDAGFKAAIIYNNQDTN-LVAMAGNSAGIHIHAVFVS 508
            G + P+VLI+RGGC F DKV+ AQ AGF AAI+Y+N+D   LVAMAGNSAGI IHAVFVS
Sbjct: 61   GASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVS 120

Query: 509  EETGLKLRKYVGRTEIQVWLMQNNENSAWSIMXXXXXXXXXXXXXXXTCFFVRKHPIRRG 688
            + +G+ L+ Y G  ++++W++ + ENSAWSIM               TCFFVR+H IRR 
Sbjct: 121  KASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRQ 180

Query: 689  -PRASRVREFNGMSRQLVKAMPSLIFTTALEDNCTSATCAICLEDYRVGDKLRILPCSHK 865
             PR SRVREF+GMS +LVKAMPSLIFTT LEDNCTS TCAICLEDY VG+KLRILPC HK
Sbjct: 181  RPRVSRVREFHGMSSRLVKAMPSLIFTTVLEDNCTSRTCAICLEDYNVGEKLRILPCRHK 240

Query: 866  FHSFCVDSWLTSWRTFCPVCKHDARTSIGDPPASERTXXXXXXXXXXXXXXXXXXXXMQI 1045
            FH+FCVDSWLTSWRTFCPVCK DARTS GDPP SE T                      +
Sbjct: 241  FHAFCVDSWLTSWRTFCPVCKRDARTSTGDPP-SESTPLLSSSPGSLAPSSLVSSVRSSL 299

Query: 1046 S-----HLSPPVSYVHSISIAPDNQQSFQGCHESRHPSSSQTP-LDXXXXXXXXXXXXXX 1207
            +     H++P  S  HS+S+             SR+ S S TP +               
Sbjct: 300  ASSSAIHIAPSPSPSHSLSV-------------SRNNSLSATPYIQQNASSQRSHASYLV 346

Query: 1208 XXNTFTCPSLSPLSSIYMSFYAXXXXXXXXXXXXXXXXXXXLC*LFSICFIKLYSQ-SHP 1384
              ++   PSLSPL+S Y+S Y                         S+ ++   S+  HP
Sbjct: 347  SPHSMGYPSLSPLNSRYLSPYIPSPSNA------------------SLSYVGSSSRPPHP 388

Query: 1385 LCRTKSAASISP---AQSLPE 1438
            L  ++SA S SP   AQSLPE
Sbjct: 389  LHYSESATSFSPYTSAQSLPE 409


>ref|XP_002325986.1| predicted protein [Populus trichocarpa] gi|222862861|gb|EEF00368.1|
            predicted protein [Populus trichocarpa]
          Length = 437

 Score =  370 bits (951), Expect = e-100
 Identities = 217/448 (48%), Positives = 269/448 (60%), Gaps = 14/448 (3%)
 Frame = +2

Query: 140  CLISSSGVLANVVLTGNSVTLSFPDIVANFARPVNGSGEHGTLFLASPLDACSPLAKANS 319
            CL++S     NV+L GN+VT++F DI ANFA  + GSGE G L+LA P+DACS L    +
Sbjct: 15   CLVASG----NVLLIGNNVTMAFDDIEANFAPAIKGSGECGVLYLAEPIDACSDLT---N 67

Query: 320  SIEDGIN--PPYVLIIRGGCHFADKVQRAQDAGFKAAIIYNNQDTNLVAMAGNSAGIHIH 493
              E G N   P+VLIIR GC F DKV+RAQ AG+KAAIIY+N++  LVAMAGNSAG+ I 
Sbjct: 68   QAEKGSNCSSPFVLIIREGCSFEDKVRRAQKAGYKAAIIYDNEEGILVAMAGNSAGVTIP 127

Query: 494  AVFVSEETGLKLRKYVGRTEIQVWLMQNNENSAWSIMXXXXXXXXXXXXXXXTCFFVRKH 673
            AVFVS+ +G  L+KY G T++++W++ + ENSAWSIM               TCFFVR+H
Sbjct: 128  AVFVSKTSGETLKKYAGLTDLELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRH 187

Query: 674  PIRRG-PRASRVREFNGMSRQLVKAMPSLIFTTALEDNCTSATCAICLEDYRVGDKLRIL 850
             IRR  PR+SRVREF+GMS +LVKAMPSL FT+ALEDNCTS TCAICLEDY VG+KLRIL
Sbjct: 188  RIRRERPRSSRVREFHGMSSRLVKAMPSLTFTSALEDNCTSTTCAICLEDYTVGEKLRIL 247

Query: 851  PCSHKFHSFCVDSWLTSWRTFCPVCKHDARTSIGDPPASERTXXXXXXXXXXXXXXXXXX 1030
            PC HKFH+FCVDSWLT+WRTFCPVCK DARTS G+PPA+E T                  
Sbjct: 248  PCRHKFHAFCVDSWLTTWRTFCPVCKRDARTSTGEPPATESTPLLSSNPSSLASSSMLSS 307

Query: 1031 XXMQIS-------HLSPPVSYVHSISIAPDNQQSFQGCHESRHPSSSQTPLD-XXXXXXX 1186
                 S         +P VSY+ S+S  P  QQS +    S   + SQ+  D        
Sbjct: 308  FRSGTSTAIQITPSRTPSVSYIPSLSSTPYAQQSLRSYRHSPSITLSQSSADLRNMSSLR 367

Query: 1187 XXXXXXXXXNTFTCPSLSPLSSIYMSFYAXXXXXXXXXXXXXXXXXXXLC*LFSICFIKL 1366
                     ++   PS+SPL++ YMS Y                         S   +  
Sbjct: 368  SRASFLVSPHSLGYPSISPLNTRYMSAYIPSPSNA------------------SPSLVSS 409

Query: 1367 YSQSHPLCRTKSAASISP---AQSLPEC 1441
              Q  PL  ++SAAS SP   A SLP+C
Sbjct: 410  SRQPRPLHCSESAASFSPFASAHSLPDC 437


>ref|XP_002533876.1| zinc finger protein, putative [Ricinus communis]
            gi|223526177|gb|EEF28507.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 434

 Score =  363 bits (931), Expect = 9e-98
 Identities = 192/348 (55%), Positives = 231/348 (66%), Gaps = 11/348 (3%)
 Frame = +2

Query: 155  SGVLANVVLTGNSVTLSFPDIVANFARPVNGSGEHGTLFLASPLDACSPLAKANSSIEDG 334
            S  LANVVL G +VTLSF D+ A FA  V  SGE G L+LA P+DACS L          
Sbjct: 20   SMTLANVVLIGRNVTLSFDDVEATFAPAVKSSGECGQLYLAEPVDACSELTNKVVKPTSN 79

Query: 335  INPPYVLIIRGGCHFADKVQRAQDAGFKAAIIYNNQDTN-LVAMAGNSAGIHIHAVFVSE 511
            +  P+VL+IRGGC F DKV+RAQ AGFKAAI+Y+N+D   LV+MAGNSAGI IHAVF+S+
Sbjct: 80   VTSPFVLVIRGGCSFEDKVRRAQRAGFKAAIVYDNEDDGVLVSMAGNSAGIKIHAVFISK 139

Query: 512  ETGLKLRKYVGRTEIQVWLMQNNENSAWSIMXXXXXXXXXXXXXXXTCFFVRKHPIRRG- 688
             +G  L+KYVG +E+++WL+ + ENSAWSIM               TCFFVR+H IRRG 
Sbjct: 140  SSGETLKKYVGLSEMELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRGR 199

Query: 689  PRASRVREFNGMSRQLVKAMPSLIFTTALEDNCTSATCAICLEDYRVGDKLRILPCSHKF 868
            PR+SRVREF+GMS +LVKAMPSLIFT  +EDNCTS TCAICLEDY VG+KLRILPC HKF
Sbjct: 200  PRSSRVREFHGMSSRLVKAMPSLIFTAVVEDNCTSQTCAICLEDYSVGEKLRILPCRHKF 259

Query: 869  HSFCVDSWLTSWRTFCPVCKHDARTSIGDPPASERTXXXXXXXXXXXXXXXXXXXXMQIS 1048
            H+ CVDSWLTSWRTFCPVCK DARTS GDPPASE T                       S
Sbjct: 260  HALCVDSWLTSWRTFCPVCKRDARTSTGDPPASESTPLLSSSPASMASSSVLSSFRSSSS 319

Query: 1049 ---------HLSPPVSYVHSISIAPDNQQSFQGCHESRHPSSSQTPLD 1165
                       S  +S++ S+S  P  QQS +  H+S   + +++  D
Sbjct: 320  LAIQIASGPSRSSSISHIPSLSTTPYLQQSLRSYHQSPSMNVNRSSAD 367


>ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis sativus]
          Length = 463

 Score =  360 bits (923), Expect = 8e-97
 Identities = 215/448 (47%), Positives = 258/448 (57%), Gaps = 15/448 (3%)
 Frame = +2

Query: 143  LISSSGVLANVVLTGNSVTLSFPDIVANFARPVNGSGEHGTLFLASPLDACSPLAKANSS 322
            L+ SSG  ANVVL G +VTLSF  I ANFA  +  SGE G L+LA PLDACS L      
Sbjct: 25   LVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTLEN-KVV 83

Query: 323  IEDGINPPYVLIIRGGCHFADKVQRAQDAGFKAAIIYNNQDTNLVAMAGNSAGIHIHAVF 502
            +    + P+ LI+RGGC F DKV+RAQ AGFKAAIIY+N+D  L+AMAG+SAGI IHAVF
Sbjct: 84   VPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNEDGGLIAMAGSSAGIRIHAVF 143

Query: 503  VSEETGLKLRKYVGRTEIQVWLMQNNENSAWSIMXXXXXXXXXXXXXXXTCFFVRKHPIR 682
            V++ +G  L+KY G   +++W++ + ENSAWSIM               TCFFVR+H IR
Sbjct: 144  VTKTSGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIR 203

Query: 683  RG-PRASRVREFNGMSRQLVKAMPSLIFTTALEDNCTSATCAICLEDYRVGDKLRILPCS 859
            RG PR+S  +EF GMSR++VKAMPSLIFTTALEDNCTS TCAICLEDY  G+KLRILPC 
Sbjct: 204  RGRPRSSHTQEFRGMSRRVVKAMPSLIFTTALEDNCTSMTCAICLEDYTPGEKLRILPCR 263

Query: 860  HKFHSFCVDSWLTSWRTFCPVCKHDARTSIGDPPASERT--------XXXXXXXXXXXXX 1015
            HKFH+ CVDSWLT+WRTFCPVCK DARTS GDPP S  T                     
Sbjct: 264  HKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSASTPLLSSAPSSVASSSILSSSRS 323

Query: 1016 XXXXXXXMQISHL--SPPVSYVHSISIAPDNQQS-FQGCHESRHPSSSQTPLDXXXXXXX 1186
                   +QIS    SP VS  HS+S  P   QS     H+S   S  Q+P         
Sbjct: 324  SLPPSSAIQISPALRSPSVSRNHSLSSTPYLHQSLISSYHQSPRSSYHQSP-SLSVSRSS 382

Query: 1187 XXXXXXXXXNTFTCPSLSPLSSIYMSFYAXXXXXXXXXXXXXXXXXXXLC*LFSICFIKL 1366
                      ++T   +SP SS Y S                      +    S      
Sbjct: 383  VELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYMIPHIPSPSNASPSIIGSSS------ 436

Query: 1367 YSQSHPLCRTKSAASISP---AQSLPEC 1441
              Q +PL  + SAAS+SP    +SLPEC
Sbjct: 437  -HQHNPLHCSGSAASLSPFASTRSLPEC 463


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