BLASTX nr result

ID: Atractylodes21_contig00006622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006622
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|2...    66   6e-09
ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta...    64   2e-08
gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitoc...    62   1e-07
gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola...    62   1e-07
ref|NP_001078555.1| succinate dehydrogenase 3-1 [Arabidopsis tha...    61   2e-07

>ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|222847572|gb|EEE85119.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 32/58 (55%), Positives = 36/58 (62%)
 Frame = -2

Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119
           RPLSPHL IY+PQ NS FSI NRI              +C KTGLICF + +FYQ LF
Sbjct: 194 RPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGLICFNYYNFYQFLF 251


>ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum]
           gi|57013992|ref|YP_173464.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|57014032|ref|YP_173503.1| succinate dehydrogenase
           subunit 3 [Nicotiana tabacum]
           gi|56806628|dbj|BAD83529.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
           gi|56806668|dbj|BAD83569.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/58 (55%), Positives = 35/58 (60%)
 Frame = -2

Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119
           RPLSPHL IYKPQ  S FSIS+RI              LC K GLICFT+ +FYQ  F
Sbjct: 5   RPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFF 62


>gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion)
           [Nymphaea tetragona]
          Length = 79

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/57 (54%), Positives = 34/57 (59%)
 Frame = -2

Query: 289 PLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119
           PLSPHL IYKPQ  S F IS+RI              LC K GLICFT+ +FYQ LF
Sbjct: 1   PLSPHLPIYKPQLTSTFPISHRISGAFLVTIVLFSYLLCLKIGLICFTYENFYQFLF 57


>gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum]
           gi|316996003|dbj|BAD83440.2| succinate dehydrogenase
           subunit 3 (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/58 (53%), Positives = 34/58 (58%)
 Frame = -2

Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119
           RPLSPHL IYKPQ  S FSI +RI              LC K GLICFT+ +FYQ  F
Sbjct: 5   RPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFF 62


>ref|NP_001078555.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana]
           gi|332004032|gb|AED91415.1| succinate dehydrogenase 3-1
           [Arabidopsis thaliana]
          Length = 186

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 30/58 (51%), Positives = 36/58 (62%)
 Frame = -2

Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119
           RPLSPHLS+Y+PQ NSM SI NRI              L  K G+IC T+ SFYQ+L+
Sbjct: 98  RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLY 155


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