BLASTX nr result
ID: Atractylodes21_contig00006622
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00006622 (692 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|2... 66 6e-09 ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana ta... 64 2e-08 gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitoc... 62 1e-07 gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Sola... 62 1e-07 ref|NP_001078555.1| succinate dehydrogenase 3-1 [Arabidopsis tha... 61 2e-07 >ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|222847572|gb|EEE85119.1| predicted protein [Populus trichocarpa] Length = 282 Score = 66.2 bits (160), Expect = 6e-09 Identities = 32/58 (55%), Positives = 36/58 (62%) Frame = -2 Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119 RPLSPHL IY+PQ NS FSI NRI +C KTGLICF + +FYQ LF Sbjct: 194 RPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGLICFNYYNFYQFLF 251 >ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|57013992|ref|YP_173464.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|57014032|ref|YP_173503.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|56806628|dbj|BAD83529.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana tabacum] gi|56806668|dbj|BAD83569.1| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana tabacum] Length = 108 Score = 64.3 bits (155), Expect = 2e-08 Identities = 32/58 (55%), Positives = 35/58 (60%) Frame = -2 Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119 RPLSPHL IYKPQ S FSIS+RI LC K GLICFT+ +FYQ F Sbjct: 5 RPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFF 62 >gb|ACH42355.1| succinate dehydrogenase subunit 3, partial (mitochondrion) [Nymphaea tetragona] Length = 79 Score = 62.0 bits (149), Expect = 1e-07 Identities = 31/57 (54%), Positives = 34/57 (59%) Frame = -2 Query: 289 PLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119 PLSPHL IYKPQ S F IS+RI LC K GLICFT+ +FYQ LF Sbjct: 1 PLSPHLPIYKPQLTSTFPISHRISGAFLVTIVLFSYLLCLKIGLICFTYENFYQFLF 57 >gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum] gi|316996003|dbj|BAD83440.2| succinate dehydrogenase subunit 3 (mitochondrion) [Nicotiana tabacum] Length = 108 Score = 62.0 bits (149), Expect = 1e-07 Identities = 31/58 (53%), Positives = 34/58 (58%) Frame = -2 Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119 RPLSPHL IYKPQ S FSI +RI LC K GLICFT+ +FYQ F Sbjct: 5 RPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFF 62 >ref|NP_001078555.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana] gi|332004032|gb|AED91415.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana] Length = 186 Score = 61.2 bits (147), Expect = 2e-07 Identities = 30/58 (51%), Positives = 36/58 (62%) Frame = -2 Query: 292 RPLSPHLSIYKPQSNSMFSISNRIXXXXXXXXXXXXXXLCFKTGLICFTFNSFYQILF 119 RPLSPHLS+Y+PQ NSM SI NRI L K G+IC T+ SFYQ+L+ Sbjct: 98 RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFYQVLY 155