BLASTX nr result

ID: Atractylodes21_contig00006545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006545
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...   154   6e-36
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...   153   1e-35
emb|CBI37628.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...   150   8e-35
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...   149   2e-34

>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score =  154 bits (390), Expect = 6e-36
 Identities = 77/108 (71%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 VELLQTLADMDLTFTGLKETDIGRHVNRLRKHPSNEVKRLVKHLVRKWKDLVDKWVGSN- 147
           V+LLQTLADMD+TF  LKETDIGRHVNRLRKHPSN+V+RLVKHLVRKWKDLVD+WV SN 
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188

Query: 146 RSDLAPATLTDGDSPLVQNVPRSAQNGNHQGPDFGYSPNPHNGSSGSE 3
             +   + L +GDSP  Q +PR+   G+HQ PDFGYSPNP NGSSGS+
Sbjct: 189 AGEFTSSALMEGDSP-PQKIPRT---GHHQVPDFGYSPNPQNGSSGSD 232


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/109 (70%), Positives = 90/109 (82%), Gaps = 2/109 (1%)
 Frame = -1

Query: 323 VELLQTLADMDLTFTGLKETDIGRHVNRLRKHPSNEVKRLVKHLVRKWKDLVDKWVGSNR 144
           V+LLQTLADMD+TF  LKETDIGRHVNRLRKHPSN+V+RLVKHLVRKWKDLVD+WV SN 
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188

Query: 143 SD--LAPATLTDGDSPLVQNVPRSAQNGNHQGPDFGYSPNPHNGSSGSE 3
           +    + A + +GDSP  Q +PR+   G+HQ PDFGYSPNP NGSSGS+
Sbjct: 189 AGEFTSSALMAEGDSP-PQKIPRT---GHHQVPDFGYSPNPQNGSSGSD 233


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/109 (70%), Positives = 90/109 (82%), Gaps = 2/109 (1%)
 Frame = -1

Query: 323 VELLQTLADMDLTFTGLKETDIGRHVNRLRKHPSNEVKRLVKHLVRKWKDLVDKWVGSNR 144
           V+LLQTLADMD+TF  LKETDIGRHVNRLRKHPSN+V+RLVKHLVRKWKDLVD+WV SN 
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188

Query: 143 SD--LAPATLTDGDSPLVQNVPRSAQNGNHQGPDFGYSPNPHNGSSGSE 3
           +    + A + +GDSP  Q +PR+   G+HQ PDFGYSPNP NGSSGS+
Sbjct: 189 AGEFTSSALMAEGDSP-PQKIPRT---GHHQVPDFGYSPNPQNGSSGSD 233


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/108 (69%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
 Frame = -1

Query: 323 VELLQTLADMDLTFTGLKETDIGRHVNRLRKHPSNEVKRLVKHLVRKWKDLVDKWVGSNR 144
           VELLQ LADMD+TF  LKETDIGRHVNRLRKHPSN+V+RLVKHLVRKWK++VD+WV  N+
Sbjct: 137 VELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQ 196

Query: 143 SDLAPAT-LTDGDSPLVQNVPRSAQNGNHQGPDFGYSPNPHNGSSGSE 3
                AT L DGDSP      ++ QNG HQ PDF YSPNPHNG SGS+
Sbjct: 197 PGEQTATLLADGDSP----QQKAPQNGYHQVPDFAYSPNPHNGGSGSD 240


>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  149 bits (377), Expect = 2e-34
 Identities = 76/109 (69%), Positives = 86/109 (78%), Gaps = 2/109 (1%)
 Frame = -1

Query: 323 VELLQTLADMDLTFTGLKETDIGRHVNRLRKHPSNEVKRLVKHLVRKWKDLVDKWV--GS 150
           V+LLQ+LADMD+TF  LKETDIGRHVNRLRKHPSNEV+RLVK LVRKWKDLVD+WV   +
Sbjct: 124 VDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKDLVDEWVKLST 183

Query: 149 NRSDLAPATLTDGDSPLVQNVPRSAQNGNHQGPDFGYSPNPHNGSSGSE 3
                A A + DGDSP  QN  +S  N +HQ PDF YSPNPHNGSSGS+
Sbjct: 184 PGETTASAIVADGDSP-QQNHLKSTSNVHHQVPDFAYSPNPHNGSSGSD 231


Top