BLASTX nr result

ID: Atractylodes21_contig00006521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006521
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    68   7e-10
emb|CBI21507.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    68   9e-10
emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]    68   9e-10
gb|ADE76420.1| unknown [Picea sitchensis]                              62   6e-08

>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = -3

Query: 275 IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSQLQSTQHSLYLNIR-HNSSFKWY--YH 105
           +AR+PRS+H +LSLVSK  R+ + SP  F TRS LQ TQ  LYL +R  +SS +W+  + 
Sbjct: 30  LARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTLRSRDSSLQWFTLHR 89

Query: 104 PNPNPTDKGXXXXXXXXXXXXXXPAYAILGPKIY 3
            NPNP                   AYA+LGP IY
Sbjct: 90  TNPNP----LLAPLPPIPSPAVGSAYAVLGPTIY 119


>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
 Frame = -3

Query: 275 IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSQLQSTQHSLYLNIRHNSSFKWY----- 111
           IARVPRS H  L LV K WR+ + SP FF+TRS L   QHSLYL +R N + KW+     
Sbjct: 35  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 94

Query: 110 ------YHPNPNP 90
                   PNP+P
Sbjct: 95  PRILASLPPNPSP 107


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
 Frame = -3

Query: 275 IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSQLQSTQHSLYLNIRHNSSFKWY----- 111
           IARVPRS H  L LV K WR+ + SP FF+TRS L   QHSLYL +R N + KW+     
Sbjct: 35  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 94

Query: 110 ------YHPNPNP 90
                   PNP+P
Sbjct: 95  PRILASLPPNPSP 107


>emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]
          Length = 285

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
 Frame = -3

Query: 275 IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSQLQSTQHSLYLNIRHNSSFKWY----- 111
           IARVPRS H  L LV K WR+ + SP FF+TRS L   QHSLYL +R N + KW+     
Sbjct: 48  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 107

Query: 110 ------YHPNPNP 90
                   PNP+P
Sbjct: 108 PRILASLPPNPSP 120


>gb|ADE76420.1| unknown [Picea sitchensis]
          Length = 352

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -3

Query: 275 IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSQLQSTQHSLYLNIR-HNSSFKWY 111
           IARVPR +H +L+ VSK WR+ ++SP FF+TR  L   Q  LY+ +R H SS+KWY
Sbjct: 21  IARVPRFFHSTLAQVSKPWRSLLQSPLFFSTRHCLNFQQEYLYIMLRTHTSSYKWY 76


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