BLASTX nr result

ID: Atractylodes21_contig00006520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006520
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21507.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    72   5e-11
emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]    72   5e-11
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...    71   1e-10
ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
 Frame = +3

Query: 3   IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSLLQSTQHSLYLNIRHNSSFKWY----- 167
           IARVPRS H  L LV K WR+ + SP FF+TRSLL   QHSLYL +R N + KW+     
Sbjct: 35  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 94

Query: 168 ------YHPNPNPADKGXXXXXXXXXXXXXXXAYAVLGPKIY 275
                   PNP+PA                  A+A +G KI+
Sbjct: 95  PRILASLPPNPSPA---------------IGSAFAAIGSKIF 121


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
 Frame = +3

Query: 3   IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSLLQSTQHSLYLNIRHNSSFKWY----- 167
           IARVPRS H  L LV K WR+ + SP FF+TRSLL   QHSLYL +R N + KW+     
Sbjct: 35  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 94

Query: 168 ------YHPNPNPADKGXXXXXXXXXXXXXXXAYAVLGPKIY 275
                   PNP+PA                  A+A +G KI+
Sbjct: 95  PRILASLPPNPSPA---------------IGSAFAAIGSKIF 121


>emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]
          Length = 285

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/102 (42%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
 Frame = +3

Query: 3   IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSLLQSTQHSLYLNIRHNSSFKWY----- 167
           IARVPRS H  L LV K WR+ + SP FF+TRSLL   QHSLYL +R N + KW+     
Sbjct: 48  IARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLKWFVLNQN 107

Query: 168 ------YHPNPNPADKGXXXXXXXXXXXXXXXAYAVLGPKIY 275
                   PNP+PA                  A+A +G KI+
Sbjct: 108 PRILASLPPNPSPA---------------IGSAFAAIGSKIF 134


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSLLQSTQHSLYLNIR-HNSSFKWY--YH 173
           +AR+PRS+H +LSLVSK  R+ + SP  F TRSLLQ TQ  LYL +R  +SS +W+  + 
Sbjct: 30  LARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTLRSRDSSLQWFTLHR 89

Query: 174 PNPNPADKGXXXXXXXXXXXXXXXAYAVLGPKIY 275
            NPNP                   AYAVLGP IY
Sbjct: 90  TNPNP----LLAPLPPIPSPAVGSAYAVLGPTIY 119


>ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|222852932|gb|EEE90479.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   IARVPRSYHLSLSLVSKLWRNTIRSPHFFATRSLLQSTQHSLYLNIR--HNSSFKWY-YH 173
           +AR+PRSYH  L+LVSK +R+ + SP  + TRSLL ++QH LYL++R    +S +W+  +
Sbjct: 30  LARIPRSYHPRLTLVSKPFRSILSSPLLYTTRSLLNTSQHFLYLSLRIPTTTSLQWFTLY 89

Query: 174 PNPNPADKGXXXXXXXXXXXXXXXAYAVLGPKIY 275
           P+     K                A+A +GPKIY
Sbjct: 90  PDQT---KNSLIPLTPAPSPLVGSAFAAVGPKIY 120


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