BLASTX nr result

ID: Atractylodes21_contig00006470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006470
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   204   2e-50
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   204   2e-50
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   198   7e-49
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...   194   1e-47
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46

>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  204 bits (518), Expect = 2e-50
 Identities = 95/134 (70%), Positives = 112/134 (83%)
 Frame = -2

Query: 668 SGLVDEGLSLFRLMLKDQKLNPRPYHYTCIIDLLGRAGRVEEAYELITTMPTTPNHTVWG 489
           +GLVDEGL LF+ ML+D +++ R  HYTC+IDLLGRAGR+EEAYELI TM   PNH VWG
Sbjct: 542 AGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWG 601

Query: 488 ALLAACVVHEKVELGEVAAKWLFELEPENTGNYILMGNIYAAVGRWEEAENVRNMINQIG 309
           ALL +CV+HE VELGEVAAKWLFELEP NTGNY+L+ NIY+AVGRW +AE+VR M+N IG
Sbjct: 602 ALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIG 661

Query: 308 LRKSPAHSFIGAGN 267
           LRK+PAHS I   N
Sbjct: 662 LRKTPAHSLIEVRN 675


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  204 bits (518), Expect = 2e-50
 Identities = 95/134 (70%), Positives = 112/134 (83%)
 Frame = -2

Query: 668 SGLVDEGLSLFRLMLKDQKLNPRPYHYTCIIDLLGRAGRVEEAYELITTMPTTPNHTVWG 489
           +GLVDEGL LF+ ML+D +++ R  HYTC+IDLLGRAGR+EEAYELI TM   PNH VWG
Sbjct: 542 AGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWG 601

Query: 488 ALLAACVVHEKVELGEVAAKWLFELEPENTGNYILMGNIYAAVGRWEEAENVRNMINQIG 309
           ALL +CV+HE VELGEVAAKWLFELEP NTGNY+L+ NIY+AVGRW +AE+VR M+N IG
Sbjct: 602 ALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIG 661

Query: 308 LRKSPAHSFIGAGN 267
           LRK+PAHS I   N
Sbjct: 662 LRKTPAHSLIEVRN 675


>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  198 bits (504), Expect = 7e-49
 Identities = 90/133 (67%), Positives = 110/133 (82%)
 Frame = -2

Query: 668 SGLVDEGLSLFRLMLKDQKLNPRPYHYTCIIDLLGRAGRVEEAYELITTMPTTPNHTVWG 489
           +G+VD+GL LF+ MLKD +  P   HYTC++DLLGRAGR++EAY+LI TMP  P H VWG
Sbjct: 540 AGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWG 599

Query: 488 ALLAACVVHEKVELGEVAAKWLFELEPENTGNYILMGNIYAAVGRWEEAENVRNMINQIG 309
           ALL ACV+HE VELGEVAA+WLFELEP NTGNY+L+  +YAA+GRWE+AENVR  ++ IG
Sbjct: 600 ALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIG 659

Query: 308 LRKSPAHSFIGAG 270
           LRK+PAHS I AG
Sbjct: 660 LRKAPAHSLIEAG 672


>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  194 bits (493), Expect = 1e-47
 Identities = 88/130 (67%), Positives = 106/130 (81%)
 Frame = -2

Query: 668 SGLVDEGLSLFRLMLKDQKLNPRPYHYTCIIDLLGRAGRVEEAYELITTMPTTPNHTVWG 489
           +GLV+EG SLF  MLK  ++     HYTC+IDLLGRAGR+ +AY LI TMP TPNH VWG
Sbjct: 532 AGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWG 591

Query: 488 ALLAACVVHEKVELGEVAAKWLFELEPENTGNYILMGNIYAAVGRWEEAENVRNMINQIG 309
           ALL ACV+HE VELGEVAA+W F+LEPENTGNY+L+  +YAAVGRW +AE VR+M+N++G
Sbjct: 592 ALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVG 651

Query: 308 LRKSPAHSFI 279
           LRK PAHS I
Sbjct: 652 LRKLPAHSLI 661


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  189 bits (481), Expect = 3e-46
 Identities = 84/130 (64%), Positives = 114/130 (87%)
 Frame = -2

Query: 665 GLVDEGLSLFRLMLKDQKLNPRPYHYTCIIDLLGRAGRVEEAYELITTMPTTPNHTVWGA 486
           GLVD+GL+LF+ M+++   +P P HYTC++DLLGRAGR++EAY+LI +MP   NH++WGA
Sbjct: 576 GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 635

Query: 485 LLAACVVHEKVELGEVAAKWLFELEPENTGNYILMGNIYAAVGRWEEAENVRNMINQIGL 306
           LL AC++H+ VELGEVAA+ LFELEPE+TGNYIL+ NIYAAVGRW++AENVR+++++IGL
Sbjct: 636 LLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGL 695

Query: 305 RKSPAHSFIG 276
           RK+PA S +G
Sbjct: 696 RKTPAQSSVG 705


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