BLASTX nr result
ID: Atractylodes21_contig00006463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00006463
(1912 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large... 573 e-161
ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arab... 571 e-160
gb|ABU45190.1| unknown [Capsicum frutescens] 568 e-159
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops... 567 e-159
gb|ABU45209.1| unknown [Solanum bulbocastanum] 566 e-159
>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
large subunit [Nicotiana plumbaginifolia]
Length = 555
Score = 573 bits (1477), Expect = e-161
Identities = 290/414 (70%), Positives = 328/414 (79%), Gaps = 3/414 (0%)
Frame = -1
Query: 1390 GFDMAPPTAATLPGAF---GQFADFPQSMPGMLQNMFPFGTSQLGALPLMPAQAMTQQAT 1220
GFDMAPPT A LPGA GQ ++PG+ NMFP +SQ GALP+MP QAMTQQAT
Sbjct: 158 GFDMAPPTTALLPGATDAAGQVPGTNPAIPGLFSNMFPLASSQFGALPMMPVQAMTQQAT 217
Query: 1219 RHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGTGGDAVVNVYINHEKKFAFVEMR 1040
RHARRVYVGGLPP ANEQ++ATFFSH+M AIGGN+AG G DAVVNVYINHEKKFAFVEMR
Sbjct: 218 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPG-DAVVNVYINHEKKFAFVEMR 276
Query: 1039 TVEEASNAMTLDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPNPNLNLAAAGLTPGGIGG 860
+VEEASNAM LDG+IFEG V+VRRP+DYNPSLAA LGPSQP+PNLNLAA G TPG GG
Sbjct: 277 SVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGG 336
Query: 859 AEGPDRVFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQAVTD 680
EGPDR+FVGGLPYYFTE QIRELLESFG LRGFDLVKDR+TGNSKGY FCVY+D +VTD
Sbjct: 337 LEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 396
Query: 679 VACAALNGLKMGDKTLTVRRATMSSGQMKSEQDTILAQAQQHIAMQKMALQIGGFNLPGA 500
+ACAALNG+KMGDKTLTVRRA + Q EQ+++L AQQ IA+Q+ LQ PGA
Sbjct: 397 IACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQ------PGA 450
Query: 499 GVGLVASHEVPTKILCLTEVITVDDLMDDGEYEEILEDMREEGRKFGDLTNVVIPRPNPN 320
+ TK+LCLTEV+TVD+L DD +Y++ILEDMR E KFG L NVVIPRPNPN
Sbjct: 451 ---------LATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPN 501
Query: 319 GDKVHGLGKVFLEYADTYGCGKAKDSLGGRKFGGNVVTAIYYPEDKYLEQDYGA 158
G GLGKVFLEYAD G KA+ L GRKFGGN V A++YPE+K+ E DY A
Sbjct: 502 GVPTPGLGKVFLEYADVDGSSKARQGLNGRKFGGNQVVAVFYPENKFSEGDYEA 555
>ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata] gi|297333961|gb|EFH64379.1| hypothetical protein
ARALYDRAFT_475241 [Arabidopsis lyrata subsp. lyrata]
Length = 589
Score = 571 bits (1472), Expect = e-160
Identities = 291/414 (70%), Positives = 328/414 (79%), Gaps = 5/414 (1%)
Frame = -1
Query: 1390 GFDMAPPT--AATLPGAFGQFADFPQS--MPGMLQNMFPFGTSQ-LGALPLMPAQAMTQQ 1226
GFDMAPP AAT A GQ P + +PGM NMFP Q LGALP++P QAMTQQ
Sbjct: 190 GFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMFPNMFPMVPGQQLGALPVLPVQAMTQQ 249
Query: 1225 ATRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGTGGDAVVNVYINHEKKFAFVE 1046
ATRHARRVYVGGLPP ANEQ++ATFFS +M+AIGGN+AG G DAVVNVYINHEKKFAFVE
Sbjct: 250 ATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPG-DAVVNVYINHEKKFAFVE 308
Query: 1045 MRTVEEASNAMTLDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPNPNLNLAAAGLTPGGI 866
MR+VEEASNAM LDGII EGV V+VRRPTDYNPSLAA LGPSQPNPNLNLAA GL+ G
Sbjct: 309 MRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLAAVGLSSGST 368
Query: 865 GGAEGPDRVFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQAV 686
GG EGPDR+FVGGLPYYFTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D +V
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 685 TDVACAALNGLKMGDKTLTVRRATMSSGQMKSEQDTILAQAQQHIAMQKMALQIGGFNLP 506
TD+ACAALNG+KMGDKTLTVRRA Q K EQ+ +L AQQ IA+Q++ LQ GG
Sbjct: 429 TDIACAALNGIKMGDKTLTVRRAIQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGG---- 484
Query: 505 GAGVGLVASHEVPTKILCLTEVITVDDLMDDGEYEEILEDMREEGRKFGDLTNVVIPRPN 326
PTKI+CLT+V+T DDL DD EY +I+EDMR+EG KFG+L NVVIPRPN
Sbjct: 485 -----------TPTKIVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPN 533
Query: 325 PNGDKVHGLGKVFLEYADTYGCGKAKDSLGGRKFGGNVVTAIYYPEDKYLEQDY 164
P+ D G+GKVFLEYAD G KA+ + GRKFGGN V A+YYPEDKYL+ DY
Sbjct: 534 PDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYLQGDY 587
>gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 568 bits (1465), Expect = e-159
Identities = 286/414 (69%), Positives = 328/414 (79%), Gaps = 3/414 (0%)
Frame = -1
Query: 1390 GFDMAPPTAATLPGAF---GQFADFPQSMPGMLQNMFPFGTSQLGALPLMPAQAMTQQAT 1220
GFDMAPPT+A LPGA GQ S+PGM NMFP Q GALP+MP QAMTQQAT
Sbjct: 154 GFDMAPPTSALLPGATDVTGQVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQAT 213
Query: 1219 RHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGTGGDAVVNVYINHEKKFAFVEMR 1040
RHARRVYVGGLPP ANEQ++ATFFSH+M AIGGN+AG G DAVVNVYINHEKKFAFVEMR
Sbjct: 214 RHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPG-DAVVNVYINHEKKFAFVEMR 272
Query: 1039 TVEEASNAMTLDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPNPNLNLAAAGLTPGGIGG 860
+VEEASNAM LDG+IFEG V+VRRP+DYNPSLAA LGPSQP+PNLNLAA GLTPG GG
Sbjct: 273 SVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGG 332
Query: 859 AEGPDRVFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQAVTD 680
EGPDR+FVGGLPYYFTE QIRELLESFG LRGFDLVKDR+TGNSKGY FCVY+D +VTD
Sbjct: 333 LEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTD 392
Query: 679 VACAALNGLKMGDKTLTVRRATMSSGQMKSEQDTILAQAQQHIAMQKMALQIGGFNLPGA 500
+ACAALNG+KMGDKTLTVRRA + Q EQ+++L AQQ IA+Q+ LQ PGA
Sbjct: 393 IACAALNGIKMGDKTLTVRRANQGTNQPNPEQESVLLHAQQQIALQRFMLQ------PGA 446
Query: 499 GVGLVASHEVPTKILCLTEVITVDDLMDDGEYEEILEDMREEGRKFGDLTNVVIPRPNPN 320
+ TK+LCLT+V++VD+L DD +Y++ILEDMR E KFG L NVVIPRPNP+
Sbjct: 447 ---------LATKVLCLTQVVSVDELNDDDDYQDILEDMRVECGKFGSLLNVVIPRPNPS 497
Query: 319 GDKVHGLGKVFLEYADTYGCGKAKDSLGGRKFGGNVVTAIYYPEDKYLEQDYGA 158
G+ GLGKVFLEYAD +A+ L GRKFGGN V A++YPE+K+ E +Y A
Sbjct: 498 GEPTPGLGKVFLEYADVESSSRARQGLNGRKFGGNEVIAVFYPENKFSEGEYEA 551
>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B gi|332195625|gb|AEE33746.1| Splicing factor
U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 567 bits (1462), Expect = e-159
Identities = 288/414 (69%), Positives = 326/414 (78%), Gaps = 5/414 (1%)
Frame = -1
Query: 1390 GFDMAPPT--AATLPGAFGQFADFPQS--MPGMLQNMFPFGTSQ-LGALPLMPAQAMTQQ 1226
GFDMAPP AAT A GQ P + +PGM NMFP Q LGALP++P QAMTQQ
Sbjct: 190 GFDMAPPDMLAATAVAAAGQVPSVPTTATIPGMFSNMFPMVPGQQLGALPVLPVQAMTQQ 249
Query: 1225 ATRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGTGGDAVVNVYINHEKKFAFVE 1046
ATRHARRVYVGGLPP ANEQ+++TFFS +M+AIGGN+AG G DAVVNVYINHEKKFAFVE
Sbjct: 250 ATRHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPG-DAVVNVYINHEKKFAFVE 308
Query: 1045 MRTVEEASNAMTLDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPNPNLNLAAAGLTPGGI 866
MR+VEEASNAM LDGII EGV V+VRRPTDYNPSLAA LGPSQPNPNLNL A GL+ G
Sbjct: 309 MRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNLNLGAVGLSSGST 368
Query: 865 GGAEGPDRVFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQAV 686
GG EGPDR+FVGGLPYYFTEVQIRELLESFGPLRGF+LVKDR+TGNSKGY FCVY+D +V
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 685 TDVACAALNGLKMGDKTLTVRRATMSSGQMKSEQDTILAQAQQHIAMQKMALQIGGFNLP 506
TD+ACAALNG+KMGDKTLTVRRA + Q K EQ+ +L AQQ IA+Q++ Q GG
Sbjct: 429 TDIACAALNGIKMGDKTLTVRRAIQGAIQPKPEQEEVLLYAQQQIALQRLMFQPGG---- 484
Query: 505 GAGVGLVASHEVPTKILCLTEVITVDDLMDDGEYEEILEDMREEGRKFGDLTNVVIPRPN 326
PTKI+CLT+V+T DDL DD EY EI+EDMR+EG KFG+L NVVIPRPN
Sbjct: 485 -----------TPTKIVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPN 533
Query: 325 PNGDKVHGLGKVFLEYADTYGCGKAKDSLGGRKFGGNVVTAIYYPEDKYLEQDY 164
P+ D G+GKVFLEYAD G KA+ + GRKFGGN V A+YYPEDKY + DY
Sbjct: 534 PDHDPTPGVGKVFLEYADVDGSSKARSGMNGRKFGGNQVVAVYYPEDKYAQGDY 587
>gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 567 bits (1460), Expect = e-159
Identities = 286/413 (69%), Positives = 325/413 (78%), Gaps = 4/413 (0%)
Frame = -1
Query: 1390 GFDMAPPTAATLPGAFGQFADFP----QSMPGMLQNMFPFGTSQLGALPLMPAQAMTQQA 1223
GFDMAPPT+A L GA P S+PGM NMFP Q GALP+MP QAMTQQA
Sbjct: 160 GFDMAPPTSALLSGATDVAGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQA 219
Query: 1222 TRHARRVYVGGLPPLANEQTIATFFSHIMTAIGGNSAGTGGDAVVNVYINHEKKFAFVEM 1043
TRHARRVYVGGLPP ANEQ++ATFFSH+M AIGGN+AG G DAVVNVYINHEKKFAFVEM
Sbjct: 220 TRHARRVYVGGLPPTANEQSVATFFSHVMYAIGGNTAGPG-DAVVNVYINHEKKFAFVEM 278
Query: 1042 RTVEEASNAMTLDGIIFEGVSVRVRRPTDYNPSLAAALGPSQPNPNLNLAAAGLTPGGIG 863
R+VEEASNAM LDG++FEG V+VRRP+DYNPSLAA LGPSQP+PNLNLAA GLTPG G
Sbjct: 279 RSVEEASNAMALDGVVFEGGPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSG 338
Query: 862 GAEGPDRVFVGGLPYYFTEVQIRELLESFGPLRGFDLVKDRDTGNSKGYGFCVYEDQAVT 683
G EGPDR+FVGGLPYYFTE QIRELLESFG LRGFDLVKDR+TGNSKGY FCVY+D +VT
Sbjct: 339 GLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVT 398
Query: 682 DVACAALNGLKMGDKTLTVRRATMSSGQMKSEQDTILAQAQQHIAMQKMALQIGGFNLPG 503
D+ACAALNG+KMGDKTLTVRRA + Q EQ+++L AQQ IA+Q+ LQ PG
Sbjct: 399 DIACAALNGIKMGDKTLTVRRANQGTTQPNPEQESVLLHAQQQIALQRFMLQ------PG 452
Query: 502 AGVGLVASHEVPTKILCLTEVITVDDLMDDGEYEEILEDMREEGRKFGDLTNVVIPRPNP 323
A + TK+LCLTEV++VD+L DD +Y++ILEDMR E KFG L NVVIPRPNP
Sbjct: 453 A---------LATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNP 503
Query: 322 NGDKVHGLGKVFLEYADTYGCGKAKDSLGGRKFGGNVVTAIYYPEDKYLEQDY 164
NG+ GLGKVFLEYAD KA+ L GRKFGGN V A++YPE+K+ E DY
Sbjct: 504 NGEPTPGLGKVFLEYADVDSSSKARQGLNGRKFGGNQVIAVFYPENKFSEGDY 556