BLASTX nr result

ID: Atractylodes21_contig00006430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006430
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX66997.1| 40s ribosomal protein S11 [Solanum tuberosum]          135   4e-30
ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus...   134   1e-29
ref|XP_002301243.1| predicted protein [Populus trichocarpa] gi|1...   130   1e-28
ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like ...   130   1e-28
ref|XP_002869362.1| 40S ribosomal protein S11 [Arabidopsis lyrat...   130   1e-28

>gb|AFX66997.1| 40s ribosomal protein S11 [Solanum tuberosum]
          Length = 159

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = -3

Query: 209 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 30
           VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGS GGGKK
Sbjct: 95  VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSGGGGKK 154

Query: 29  AFTGI 15
           AFTG+
Sbjct: 155 AFTGM 159


>ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus communis]
           gi|223527780|gb|EEF29881.1| 40S ribosomal protein S11,
           putative [Ricinus communis]
          Length = 159

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/65 (95%), Positives = 64/65 (98%)
 Frame = -3

Query: 209 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 30
           +KKYQRYEKRHSNIPAHISPCFRVKEGDHV IGQCRPLSKTVRFNVLKVIPAGSSGGGKK
Sbjct: 95  IKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 154

Query: 29  AFTGI 15
           AFTG+
Sbjct: 155 AFTGM 159


>ref|XP_002301243.1| predicted protein [Populus trichocarpa] gi|118484152|gb|ABK93959.1|
           unknown [Populus trichocarpa]
           gi|118485320|gb|ABK94519.1| unknown [Populus
           trichocarpa] gi|222842969|gb|EEE80516.1| predicted
           protein [Populus trichocarpa]
          Length = 159

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/65 (92%), Positives = 63/65 (96%)
 Frame = -3

Query: 209 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 30
           VKKYQRYEKRHSNIPAHISPCFR++EGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGG KK
Sbjct: 95  VKKYQRYEKRHSNIPAHISPCFRIREGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGAKK 154

Query: 29  AFTGI 15
           AFT +
Sbjct: 155 AFTAM 159


>ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 2 [Cucumis
           sativus] gi|449493335|ref|XP_004159259.1| PREDICTED: 40S
           ribosomal protein S11-3-like isoform 2 [Cucumis sativus]
          Length = 159

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/65 (93%), Positives = 62/65 (95%)
 Frame = -3

Query: 209 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 30
           VKKYQRYEKRHSNIPAHI+PCFRVKEGDHV IGQCRPLSKTVRFNVLKVIPAGSS GGKK
Sbjct: 95  VKKYQRYEKRHSNIPAHIAPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSAGGKK 154

Query: 29  AFTGI 15
           AF GI
Sbjct: 155 AFAGI 159


>ref|XP_002869362.1| 40S ribosomal protein S11 [Arabidopsis lyrata subsp. lyrata]
           gi|297315198|gb|EFH45621.1| 40S ribosomal protein S11
           [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/65 (93%), Positives = 63/65 (96%)
 Frame = -3

Query: 209 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSGGGKK 30
           VKKYQRYEKRHSNIPAH+SPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSS  GKK
Sbjct: 95  VKKYQRYEKRHSNIPAHVSPCFRVKEGDHVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKK 154

Query: 29  AFTGI 15
           AFTG+
Sbjct: 155 AFTGM 159


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