BLASTX nr result

ID: Atractylodes21_contig00006405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006405
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   286   8e-75
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   285   1e-74
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              281   3e-73
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   274   3e-71
ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70

>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
            truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
            helicase RecQ family protein expressed [Medicago
            truncatula]
          Length = 685

 Score =  286 bits (731), Expect = 8e-75
 Identities = 149/251 (59%), Positives = 184/251 (73%), Gaps = 1/251 (0%)
 Frame = +2

Query: 2    RHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKV 181
            RHFAEPLQ+CNGMCD CAFSCEV E+D S HA+ +VSLLQ+IQ  DQR+TMLQLV+K+K 
Sbjct: 442  RHFAEPLQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVEKMKT 501

Query: 182  KNKEVGFELKKDELEKLVIQLILHRVLKEEFSHTAYATNAYVTVGPLATHVLHGKKTIML 361
            K KE+G  LK++E+E+L++ L+L R LKEEF HTAY+TNAY+TVGPLA  +L GKKT+ L
Sbjct: 502  KQKEIGSYLKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGKKTVKL 561

Query: 362  EVTXXXXXXXXXXXXXXXXXYSGLEVKLDNLRKELSSMHGGIFPHSILSTQQISLLCSQK 541
            E++                  SGLE+KLD LRKELSS HGGI PHS+LSTQQISLLCSQK
Sbjct: 562  EISTEEKTKASARLKRSLGS-SGLELKLDELRKELSSNHGGILPHSVLSTQQISLLCSQK 620

Query: 542  PETTAQLEKIIGKLKTQKYGERILEVIGKQESDEEQGHDSSDEEQQTSVSRNAKRSRNKK 721
            P +  +LEK IGKLKT+KYG +IL  I K         D    ++Q +  R AKRS+ KK
Sbjct: 621  PNSLEELEKAIGKLKTEKYGNKILAQIVKYS-------DFELTDEQVNDGRAAKRSKTKK 673

Query: 722  -VVLIDSSEDE 751
             +VLI++SEDE
Sbjct: 674  NLVLIETSEDE 684


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
          Length = 711

 Score =  285 bits (730), Expect = 1e-74
 Identities = 152/252 (60%), Positives = 186/252 (73%), Gaps = 2/252 (0%)
 Frame = +2

Query: 2    RHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKV 181
            RHFAEPLQDCNGMCDNCAFS EVKE+D S  A+A++SLLQ++Q+ DQR TMLQ+VDK+KV
Sbjct: 459  RHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKV 518

Query: 182  KNKEVGFELKKDELEKLVIQLILHRVLKEEFSHTAYATNAYVTVGPLATHVLHGKKTIML 361
            KNK++G +L+K+E+E LVIQLI  RVLKEEF HTAYATNAYVT+G L   V HGK+ + L
Sbjct: 519  KNKDLGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKL 578

Query: 362  EV-TXXXXXXXXXXXXXXXXXYSGLEVKLDNLRKELSSMHGGIFPHSILSTQQISLLCSQ 538
            E+ T                  SGLE+KLD LRKELSS HGGIFPHS+LSTQQIS+L +Q
Sbjct: 579  EISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQ 638

Query: 539  KPETTAQLEKIIGKLKTQKYGERILEVIGKQESDEEQGHDSSDEEQQTSVSRNAKRSR-N 715
            KP +  +LE +IGKLKT+KYG +ILE I K    E+  +    +E Q S +R  KR + N
Sbjct: 639  KPTSILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPKRLKSN 698

Query: 716  KKVVLIDSSEDE 751
            K VVLI+SS DE
Sbjct: 699  KAVVLIESSGDE 710


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  281 bits (718), Expect = 3e-73
 Identities = 150/252 (59%), Positives = 188/252 (74%), Gaps = 2/252 (0%)
 Frame = +2

Query: 2    RHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKV 181
            RHFAEPLQDCNGMCDNCAFS EVKE+D S  A+A++SLLQ++Q+ DQR TMLQ+VDK+KV
Sbjct: 459  RHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVDKMKV 518

Query: 182  KNKEVGFELKKDELEKLVIQLILHRVLKEEFSHTAYATNAYVTVGPLATHVLHGKKTIML 361
            KNK++G +L+K+E+E LVIQLI  RVLKEEF HTAYATNAYVT+G L   V HGK+ + L
Sbjct: 519  KNKDLGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGKRIVKL 578

Query: 362  EV-TXXXXXXXXXXXXXXXXXYSGLEVKLDNLRKELSSMHGGIFPHSILSTQQISLLCSQ 538
            E+ T                  SGLE+KLD LRKELSS HGGIFPHS+LSTQQIS+L +Q
Sbjct: 579  EISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQISILSAQ 638

Query: 539  KPETTAQLEKIIGKLKTQKYGERILEVIGKQESDEEQGHDSSDEEQQTSVSRNAKRSR-N 715
            KP +  + + +IGKLKT+KYG +ILE I K  ++ EQ  +   +++Q S +R  KR + N
Sbjct: 639  KPTSILEAKTMIGKLKTEKYGSKILEEIAKY-TETEQPENVPPDDRQGSENRAPKRLKSN 697

Query: 716  KKVVLIDSSEDE 751
            K VVLI+SS DE
Sbjct: 698  KAVVLIESSGDE 709


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
            gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
            [Ricinus communis]
          Length = 714

 Score =  274 bits (700), Expect = 3e-71
 Identities = 143/251 (56%), Positives = 181/251 (72%), Gaps = 1/251 (0%)
 Frame = +2

Query: 2    RHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKV 181
            RHF+EPLQDCNGMCDNCAFS EV E+D + HA+ +VSLLQ++ + DQR TMLQLVDK+K 
Sbjct: 466  RHFSEPLQDCNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVDKVKN 525

Query: 182  KNKEVGFELKKDELEKLVIQLILHRVLKEEFSHTAYATNAYVTVGPLATHVLHGKKTIML 361
            K+KE+G +LK++E+E+LVIQLIL  V KEEF HTAYATNAYV  GPLA  VL G+K + L
Sbjct: 526  KHKELGADLKREEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGRKIVKL 585

Query: 362  EVTXXXXXXXXXXXXXXXXXYSGLEVKLDNLRKELSSMHGGIFPHSILSTQQISLLCSQK 541
            E++                  SGLE KLD LRKELS+ H GI PHS+LS+QQ+S++ +QK
Sbjct: 586  EISNKQNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSMISAQK 645

Query: 542  PETTAQLEKIIGKLKTQKYGERILEVIGKQESDEEQGHDSSDEEQQTSVSRNAKRSRNKK 721
            P +T +LEKIIGKLKT++YG RILE I K     E   D+     + S  R +KR + KK
Sbjct: 646  PNSTEELEKIIGKLKTERYGNRILEEIKKFAGSNES--DNGILNDEGSKRRPSKRLKTKK 703

Query: 722  -VVLIDSSEDE 751
             +VLI+SS+DE
Sbjct: 704  DLVLIESSDDE 714


>ref|XP_002304389.1| predicted protein [Populus trichocarpa] gi|222841821|gb|EEE79368.1|
            predicted protein [Populus trichocarpa]
          Length = 718

 Score =  270 bits (691), Expect = 4e-70
 Identities = 147/257 (57%), Positives = 188/257 (73%), Gaps = 7/257 (2%)
 Frame = +2

Query: 2    RHFAEPLQDCNGMCDNCAFSCEVKEIDASGHARAVVSLLQEIQEKDQRATMLQLVDKLKV 181
            RHFAEPLQDCNGMCDNCAF  EV E+D S HA+ +VSLLQ+ QEKDQR TMLQLVDK+K 
Sbjct: 463  RHFAEPLQDCNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKN 522

Query: 182  KNKEVGFELKKDELEKLVIQLILHRVLKEEFSHTAYATNAYVTVGPLATHVLHGKKTIML 361
            K KE+G ++KK+E+E+LVIQLIL  V KEE+ HTAYATNAYVT+GPLA  VL GKK + L
Sbjct: 523  K-KELGSDIKKEEMEQLVIQLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKL 581

Query: 362  EV-TXXXXXXXXXXXXXXXXXYSGLEVKLDNLRKELSSMHGGIFPHSILSTQQISLLCSQ 538
            E+ +                 +SGLE+KLD LR++LSS HGGIFPHS+LS+QQ+S++ SQ
Sbjct: 582  EISSKQKNKGDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQ 641

Query: 539  KPETTAQ-----LEKIIGKLKTQKYGERILEVIGKQESDEEQGHDSSDEEQQTSVSRNAK 703
            KP +  +     LEKIIGKLKT+KYG +IL+ I K    E   +   +EE + S +R +K
Sbjct: 642  KPSSAQEASPYHLEKIIGKLKTEKYGSKILDEIKKYTGSEPPDNGMLNEE-EGSGNRASK 700

Query: 704  RSRNKK-VVLIDSSEDE 751
            R + KK +V+I+SS++E
Sbjct: 701  RLKTKKGIVVIESSDEE 717


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