BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006394
         (1830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      506   e-140
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   499   e-138
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   466   e-129
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      466   e-128

>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  509 bits (1312), Expect = e-142
 Identities = 266/474 (56%), Positives = 343/474 (72%), Gaps = 4/474 (0%)
 Frame = -3

Query: 1573 MMATTAVVGVRAGKRFLGSSPYYSDVSEKLTRSSNLGFIF---VLTTNLISSKKSPNYNH 1403
            MMAT AV+G+ +GKR L SS YYSD++EKL+  ++ G  +     T N+I +KKS NY  
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60

Query: 1402 SFTNS-RDTHSIRALKEHVDTALDLPNAGQWVQRFDHLDEEVSEHELPVEAILLLQKSLL 1226
            SF +S R++HSI+ALKEHVDTA    N   W + FD  +EE S  +  VEA+LLLQKS+L
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1225 EKQWXXXXXXXXXXXXXTERNSRKVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGENKQ 1046
            EKQW             +++N++K+ VT SG+SAR+RR++ +     ++  ++Q  + K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 1045 LRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLGSEP 866
            LRS+ SP+LLQN  +GY+KGV ++ +L H+EV  LS+ I+ GL            LG EP
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 865  SERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXXXXX 686
            S+ Q+A SLRIS  DLQ+K I+C+LA+EKLA+SNVRLVMS+AQKY +MGA+M+D      
Sbjct: 241  SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 685  XXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTAKAK 506
                  IEK+D S+G KISTYVYWWIRQGV+R   +NS+TLRLP HLHERL  IR AK +
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 505  LERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFIADD 326
            LE KG+TPSID+IAESL MS++KV NATEA+ KVFS+D+EAFPSLNGLPGE  HS+IAD+
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 325  SPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGLDNEYLTWEDISRR 164
             P+NNPWHGVDE ALK+EV KLI  TL ERE+EII LY+GLD E LTWEDIS+R
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKR 474


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  506 bits (1302), Expect = e-140
 Identities = 265/473 (56%), Positives = 338/473 (71%), Gaps = 3/473 (0%)
 Frame = -3

Query: 1573 MMATTAVVGVRAGKRFLGSSPYYSDVSEKLTRSSNLGFI---FVLTTNLISSKKSPNYNH 1403
            MM+T AV+G+ AGKR L SS YYSD++EKLT +S+            N+I++KKS +Y+ 
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSP 60

Query: 1402 SFTNSRDTHSIRALKEHVDTALDLPNAGQWVQRFDHLDEEVSEHELPVEAILLLQKSLLE 1223
            S  +SR + S ++LKEHVD   D  +   W + ++ L  E  + +  VE +LLLQKS+LE
Sbjct: 61   SCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLE 120

Query: 1222 KQWXXXXXXXXXXXXXTERNSRKVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGENKQL 1043
            KQW              E+ S+K+H+T SG SARRRR+D++     R+SS       K L
Sbjct: 121  KQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPL 180

Query: 1042 RSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLGSEPS 863
            RSII PELLQN  +GY+KGV +E LLTH+EV  LSKKI++GL+           LG EPS
Sbjct: 181  RSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPS 240

Query: 862  ERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXXXXXX 683
            + QLA SL++S  DLQ+  IEC+LA+E+LA+SNVRLVMS+AQ+Y ++GA+M+D       
Sbjct: 241  DDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGLI 300

Query: 682  XXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTAKAKL 503
                 IEK+DPS+G+KISTYVYWWIRQGV+R   ENS+TLRLPT+LHERLS IR AKA+L
Sbjct: 301  GLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKARL 360

Query: 502  ERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFIADDS 323
            E KGITPS++ IA SL MS+KKV NATEA  K++S+D+EAFPSLNGLPGE LHS+IAD+ 
Sbjct: 361  EEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADNH 420

Query: 322  PDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGLDNEYLTWEDISRR 164
             +NNPWHGVD  ALKDEV  LI+ TL +REREII LYYGLDNE LTWEDIS+R
Sbjct: 421  LENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKR 473


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  499 bits (1285), Expect = e-138
 Identities = 266/473 (56%), Positives = 340/473 (71%), Gaps = 4/473 (0%)
 Frame = -3

Query: 1570 MATTAVVGVRAGKRFLGSSPYYSDVSEKLTRSSNLG---FIFVLTTNLISSKKSPNYNHS 1400
            MAT AV+G+ AGKR L S+ YYSD++EKL+ ++  G   +    T  LI +KKS NY  S
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 1399 FTNS-RDTHSIRALKEHVDTALDLPNAGQWVQRFDHLDEEVSEHELPVEAILLLQKSLLE 1223
            F +S R+T SI+ALKEHVDTA     A    + F+ ++EE S+ +  VEA+LLLQKS+LE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 1222 KQWXXXXXXXXXXXXXTERNSRKVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGENKQL 1043
            KQW             + ++ +K+ VT SG+SAR+RRI+ +    +++    Q    KQL
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 1042 RSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLGSEPS 863
            +S +SPELLQN  +GY+KGV +E LL+H+EV  LS+ IK GL            LG +PS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 862  ERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXXXXXX 683
            + Q+ATSL+IS  +LQ+K I C+LA+EKLA+SNVRLVMS+AQ+Y +MGA+M+D       
Sbjct: 241  DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 682  XXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTAKAKL 503
                 IEK+D S+G +ISTYVYWWIRQGV+R   ENS+TLRLP HLHERL  IR AK +L
Sbjct: 301  GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 502  ERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFIADDS 323
            E KG+TPSID+IAESL +S+KKV NATEAV KVFS+D+EAFPSLNGLPGE  HS+IAD+ 
Sbjct: 361  EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 322  PDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGLDNEYLTWEDISRR 164
             +NNPWHGVD+ ALKDEV KLI +TL ERE+EII LYYGLDNE LTWEDIS+R
Sbjct: 421  LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKR 473


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  466 bits (1199), Expect = e-129
 Identities = 256/475 (53%), Positives = 333/475 (70%), Gaps = 5/475 (1%)
 Frame = -3

Query: 1573 MMATTAVVGVRAGKRFLGSSPYYSDVSEKLTRSSN--LGFIFVLTT-NLISSKKSPNYNH 1403
            MMAT A++G+ A KR L SS YYSD +EK+  +++  LG   V ++ +++ +K S N++ 
Sbjct: 1    MMATAAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSP 60

Query: 1402 SF--TNSRDTHSIRALKEHVDTALDLPNAGQWVQRFDHLDEEVSEHELPVEAILLLQKSL 1229
             +  +N      I+A+KEHV+T    P A  W       DEE +E +  VEA+LLLQKS+
Sbjct: 61   RYPSSNRHSQQCIKAVKEHVETPSS-PIAEPWHNTTSWEDEE-TELKYTVEALLLLQKSM 118

Query: 1228 LEKQWXXXXXXXXXXXXXTERNSRKVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGENK 1049
            LEKQW              E+  +KV VT SG+SAR+RR+ ++    +++  + Q   +K
Sbjct: 119  LEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 178

Query: 1048 QLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLGSE 869
            QLR  ISPELLQN  +GY+KG+ +E LL+H+EV  LSKKIK+GL            LG E
Sbjct: 179  QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLGCE 238

Query: 868  PSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXXXX 689
            PSE QLA SL+IS  +L+++ +E +LA+EKLA+SNVRLVMS+AQ+Y +MGA+M+D     
Sbjct: 239  PSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 298

Query: 688  XXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTAKA 509
                   IEK+D S+G KISTYVYWWIRQGV+R   ENS+TLRLPTHLHERL  IR AK 
Sbjct: 299  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 358

Query: 508  KLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFIAD 329
            KL+ KGITPS+D+IAESL MS+KKV NATEA+ KVFS+D+EAFPSLNGLPGE  HS+IAD
Sbjct: 359  KLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 418

Query: 328  DSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGLDNEYLTWEDISRR 164
            +  +NNPWHG D   LK EV +LI MTLG+REREII LY+GLDNE LTWE+IS+R
Sbjct: 419  NCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGLDNECLTWEEISKR 473


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  466 bits (1198), Expect = e-128
 Identities = 258/469 (55%), Positives = 316/469 (67%), Gaps = 4/469 (0%)
 Frame = -3

Query: 1558 AVVGVRAGKRFLGSSPYYSDVSEKLTRSSNL--GFIFVLTTNLISSKKSPNYNHSFTNSR 1385
            A++G+ AG R L SS YYS ++EK   S +      F    N+I++K S NY+ S+ ++R
Sbjct: 3    AIIGLSAGNRILSSSFYYSVLTEKFCVSDHALPCHHFPSPKNVINAKNSSNYSPSYVSNR 62

Query: 1384 DTHSIRALKEHVDTALDLPNAGQ-WVQRFDHLDEEVSEHELPVEAILLLQKSLLEKQWXX 1208
               S++ALKEHVD A +  +  + WVQ F  L       E  VE +LLLQKS+LEKQW  
Sbjct: 63   KKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNL 122

Query: 1207 XXXXXXXXXXXTERN-SRKVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGENKQLRSII 1031
                        E N  +K+ +T SG SARRRR+D +       +S      +K+LRS+I
Sbjct: 123  SAEKAMTN----ENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRSVI 178

Query: 1030 SPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLGSEPSERQL 851
             PELLQN  +GY+ GV  + LLTH+EV  LSKKIK GL+           LG EPS+ QL
Sbjct: 179  GPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQL 238

Query: 850  ATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXXXXXXXXXX 671
            A SL+IS  DL++  IEC+LA+EKLA+SNVRLVMS+AQ+Y   G +M+D           
Sbjct: 239  AISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGLLR 298

Query: 670  XIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTAKAKLERKG 491
             IEK+D SRG KISTYVYWWIRQGV+R   ENS+TLRLP HLHERLS IR AK KL+  G
Sbjct: 299  GIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKENG 358

Query: 490  ITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFIADDSPDNN 311
            ITPSI+KIAE L MS+KKV NATEA  KVFS+D+EAFPSLNGLPGE LHS+IAD+  +N 
Sbjct: 359  ITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLENI 418

Query: 310  PWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGLDNEYLTWEDISRR 164
            PWHGVDE  LKDEV  LI+ TL EREREI+ LYYGLDNE LTWEDISRR
Sbjct: 419  PWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRR 467