BLASTX nr result

ID: Atractylodes21_contig00006370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006370
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   205   4e-51
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   192   2e-47
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              183   1e-44
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   180   9e-44
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ...   180   9e-44

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  205 bits (521), Expect = 4e-51
 Identities = 103/145 (71%), Positives = 122/145 (84%)
 Frame = -1

Query: 435 LSKISRTPSQTISNSGVPDIPEKGMMSDVLPEALNSDIDLPNDAIIEDEWGRTHASGVHV 256
           L+KISRTPS+T + S   +IPEK +  ++LPE L  D  L  +AIIEDEWGRTHASGVHV
Sbjct: 429 LNKISRTPSETKTASRNFEIPEKRVADEMLPENLVDDSVLLEEAIIEDEWGRTHASGVHV 488

Query: 255 GGRIVLNLWRLVRSEVKLNMYTAEAVVEAVLRQKIPFIPCRTLTKWFASGPGKARYRCIE 76
           GGRIVLN+WRL+R E+KLNMYTAE+V EAVLRQKIP I  R LTKWF+SGPG+ARYR IE
Sbjct: 489 GGRIVLNVWRLMRGEIKLNMYTAESVAEAVLRQKIPSIRNRVLTKWFSSGPGRARYRSIE 548

Query: 75  YVLERAKLNFQVMHQLDMINWTSEL 1
           YV++RAKLNF++M+QLDMIN TSEL
Sbjct: 549 YVIQRAKLNFEIMNQLDMINRTSEL 573


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
           gi|223548348|gb|EEF49839.1| DNA polymerase zeta
           catalytic subunit, putative [Ricinus communis]
          Length = 2066

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/145 (64%), Positives = 118/145 (81%)
 Frame = -1

Query: 435 LSKISRTPSQTISNSGVPDIPEKGMMSDVLPEALNSDIDLPNDAIIEDEWGRTHASGVHV 256
           L+ ISRTP +    +   +I +K +++ +L E+L ++  L   A+IEDEWGRTHASGVHV
Sbjct: 450 LNNISRTPLEANIGARETEISDKEILATMLDESLVAESALVEQAVIEDEWGRTHASGVHV 509

Query: 255 GGRIVLNLWRLVRSEVKLNMYTAEAVVEAVLRQKIPFIPCRTLTKWFASGPGKARYRCIE 76
           GGRIVLN+WRL+R+EVKLN+YT EAV EAVLR+KIP IP R LTKWF+SGPG+ARYRCIE
Sbjct: 510 GGRIVLNIWRLIRNEVKLNLYTVEAVGEAVLRRKIPSIPYRVLTKWFSSGPGRARYRCIE 569

Query: 75  YVLERAKLNFQVMHQLDMINWTSEL 1
           Y++ RAKLN ++M+QLDMIN TSEL
Sbjct: 570 YMVHRAKLNLEIMNQLDMINRTSEL 594


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/121 (73%), Positives = 104/121 (85%)
 Frame = -1

Query: 363  MMSDVLPEALNSDIDLPNDAIIEDEWGRTHASGVHVGGRIVLNLWRLVRSEVKLNMYTAE 184
            +  ++LPE L  D  L  +AIIEDEWGRTHASGVHVGGRIVLN+WRL+R E+KLNMYTAE
Sbjct: 1010 LADEMLPENLVDDSVLLEEAIIEDEWGRTHASGVHVGGRIVLNVWRLMRGEIKLNMYTAE 1069

Query: 183  AVVEAVLRQKIPFIPCRTLTKWFASGPGKARYRCIEYVLERAKLNFQVMHQLDMINWTSE 4
            +V EAVLRQKIP I  R LTKWF+SGPG+ARYR IEYV++RAKLNF++M+QLDMIN TSE
Sbjct: 1070 SVAEAVLRQKIPSIRNRVLTKWFSSGPGRARYRSIEYVIQRAKLNFEIMNQLDMINRTSE 1129

Query: 3    L 1
            L
Sbjct: 1130 L 1130


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/145 (62%), Positives = 112/145 (77%)
 Frame = -1

Query: 435  LSKISRTPSQTISNSGVPDIPEKGMMSDVLPEALNSDIDLPNDAIIEDEWGRTHASGVHV 256
            L+ ISRTPS T +N+      ++ + +++LP+ L ++     + +IEDEWGRTHASGVHV
Sbjct: 1151 LNNISRTPSPTTTNNSDN---KRKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHV 1207

Query: 255  GGRIVLNLWRLVRSEVKLNMYTAEAVVEAVLRQKIPFIPCRTLTKWFASGPGKARYRCIE 76
            GGRIVLN WRL+R EVKLNMYT EAV EAVLRQK+P IP + LT+WF+SGP  ARYRCIE
Sbjct: 1208 GGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIE 1267

Query: 75   YVLERAKLNFQVMHQLDMINWTSEL 1
            YV+ RA LN ++M QLDMIN TSEL
Sbjct: 1268 YVIRRANLNLEIMSQLDMINRTSEL 1292


>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
          Length = 1871

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/145 (62%), Positives = 112/145 (77%)
 Frame = -1

Query: 435  LSKISRTPSQTISNSGVPDIPEKGMMSDVLPEALNSDIDLPNDAIIEDEWGRTHASGVHV 256
            L+ ISRTPS T +N+      ++ + +++LP+ L ++     + +IEDEWGRTHASGVHV
Sbjct: 1151 LNNISRTPSPTTTNNSDN---KRKLGNNLLPDPLVANPAQVEEVVIEDEWGRTHASGVHV 1207

Query: 255  GGRIVLNLWRLVRSEVKLNMYTAEAVVEAVLRQKIPFIPCRTLTKWFASGPGKARYRCIE 76
            GGRIVLN WRL+R EVKLNMYT EAV EAVLRQK+P IP + LT+WF+SGP  ARYRCIE
Sbjct: 1208 GGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVLTEWFSSGPAGARYRCIE 1267

Query: 75   YVLERAKLNFQVMHQLDMINWTSEL 1
            YV+ RA LN ++M QLDMIN TSEL
Sbjct: 1268 YVIRRANLNLEIMSQLDMINRTSEL 1292


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