BLASTX nr result

ID: Atractylodes21_contig00006053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00006053
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512417.1| histone h2a, putative [Ricinus communis] gi|...   169   3e-40
dbj|BAC53941.1| H2A histone [Nicotiana tabacum]                       168   5e-40
ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucu...   165   3e-39
ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370...   165   3e-39
ref|XP_003554652.1| PREDICTED: probable histone H2A.5 [Glycine max]   164   7e-39

>ref|XP_002512417.1| histone h2a, putative [Ricinus communis]
           gi|223548378|gb|EEF49869.1| histone h2a, putative
           [Ricinus communis]
          Length = 146

 Score =  169 bits (427), Expect = 3e-40
 Identities = 91/121 (75%), Positives = 97/121 (80%), Gaps = 1/121 (0%)
 Frame = -3

Query: 361 VTKSVKAGLQFPVGRIARFLKKGRYAQRTGSGAPIXXXXXXXXXXXXXXXXAGNAARDNK 182
           V+KSVKAGLQFPVGRIARFLKKGRYAQR GSGAP+                AGNAARDNK
Sbjct: 22  VSKSVKAGLQFPVGRIARFLKKGRYAQRFGSGAPVYLAAVLEYLAAEVLELAGNAARDNK 81

Query: 181 KTRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSTSSDAEK-TTKTPK 5
           K RINPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLPKKS +  A+K + K+PK
Sbjct: 82  KNRINPRHVLLAVRNDEELGKLLHGVTIASGGVLPNINPVLLPKKSAAGPADKPSEKSPK 141

Query: 4   S 2
           S
Sbjct: 142 S 142


>dbj|BAC53941.1| H2A histone [Nicotiana tabacum]
          Length = 148

 Score =  168 bits (425), Expect = 5e-40
 Identities = 91/123 (73%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = -3

Query: 361 VTKSVKAGLQFPVGRIARFLKKGRYAQRTGSGAPIXXXXXXXXXXXXXXXXAGNAARDNK 182
           VTKSVKAGLQFPVGRIARFLKKGRYAQR GSGAPI                AGNAARDNK
Sbjct: 24  VTKSVKAGLQFPVGRIARFLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNK 83

Query: 181 KTRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSTSSDAE----KTTK 14
           K+RI PRHVLLAVRNDEELGKLL+GVTIASGGVLPNINPVLLPKKS +++ +    K TK
Sbjct: 84  KSRIIPRHVLLAVRNDEELGKLLSGVTIASGGVLPNINPVLLPKKSAAAEEKASTPKATK 143

Query: 13  TPK 5
           +PK
Sbjct: 144 SPK 146


>ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucumis sativus]
           gi|449521036|ref|XP_004167537.1| PREDICTED: probable
           histone H2A.5-like [Cucumis sativus]
          Length = 141

 Score =  165 bits (418), Expect = 3e-39
 Identities = 89/122 (72%), Positives = 95/122 (77%), Gaps = 3/122 (2%)
 Frame = -3

Query: 361 VTKSVKAGLQFPVGRIARFLKKGRYAQRTGSGAPIXXXXXXXXXXXXXXXXAGNAARDNK 182
           V+KSVKAGLQFPVGRI R+LKKGRYAQRT +GAPI                AGNAARDNK
Sbjct: 18  VSKSVKAGLQFPVGRIGRYLKKGRYAQRTAAGAPIYLAAVLEYLAAEVLELAGNAARDNK 77

Query: 181 KTRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSTSSD---AEKTTKT 11
           K RINPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLPKK+ S+    AEK  K+
Sbjct: 78  KNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKKTASNSTPTAEKAQKS 137

Query: 10  PK 5
           PK
Sbjct: 138 PK 139


>ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370|gb|EEE94917.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  165 bits (418), Expect = 3e-39
 Identities = 89/121 (73%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
 Frame = -3

Query: 361 VTKSVKAGLQFPVGRIARFLKKGRYAQRTGSGAPIXXXXXXXXXXXXXXXXAGNAARDNK 182
           V+KS KAGLQFPVGRIARFLKKGRYAQR GSGAPI                AGNAARDNK
Sbjct: 19  VSKSTKAGLQFPVGRIARFLKKGRYAQRVGSGAPIYMAAVLEYLAAEVLELAGNAARDNK 78

Query: 181 KTRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSTSSDAEKTT--KTP 8
           K RINPRHVLLA+RNDEELGKLL GVTIASGGVLPNINPVLLPKKS SS+    +  K+P
Sbjct: 79  KNRINPRHVLLAIRNDEELGKLLQGVTIASGGVLPNINPVLLPKKSASSEKSSGSEPKSP 138

Query: 7   K 5
           K
Sbjct: 139 K 139


>ref|XP_003554652.1| PREDICTED: probable histone H2A.5 [Glycine max]
          Length = 144

 Score =  164 bits (415), Expect = 7e-39
 Identities = 86/122 (70%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = -3

Query: 361 VTKSVKAGLQFPVGRIARFLKKGRYAQRTGSGAPIXXXXXXXXXXXXXXXXAGNAARDNK 182
           V+KS+KAGLQFPV R+AR+LKKGRY++R G+GAPI                AGNAARDNK
Sbjct: 19  VSKSIKAGLQFPVSRVARYLKKGRYSRRLGTGAPIYLAAVLEYLAAEVLELAGNAARDNK 78

Query: 181 KTRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKSTSSDAEK--TTKTP 8
           K RINPRHVLLAVRND+ELGKLL GVTIASGGVLPNINPVLLPKKST++ +EK  T K+P
Sbjct: 79  KNRINPRHVLLAVRNDDELGKLLQGVTIASGGVLPNINPVLLPKKSTTAPSEKSSTPKSP 138

Query: 7   KS 2
           KS
Sbjct: 139 KS 140


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