BLASTX nr result

ID: Atractylodes21_contig00005978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005978
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, c...   293   5e-77
ref|XP_002274963.1| PREDICTED: ATP synthase delta chain, chlorop...   259   6e-67
ref|XP_002327324.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
ref|XP_002325568.1| predicted protein [Populus trichocarpa] gi|2...   243   5e-62
ref|XP_004138373.1| PREDICTED: ATP synthase delta chain, chlorop...   242   9e-62

>sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, chloroplastic; AltName:
           Full=F-ATPase delta chain; Flags: Precursor
           gi|19787|emb|CAA45153.1| chloroplast ATP synthase (delta
           subunit) [Nicotiana tabacum]
          Length = 248

 Score =  293 bits (750), Expect = 5e-77
 Identities = 160/246 (65%), Positives = 185/246 (75%), Gaps = 5/246 (2%)
 Frame = -3

Query: 954 SLQRAPITLHSSSARSNSV---NPVNLSFSGGLRLPKLTIKI--THRSRRGGGCLGXXXX 790
           +LQ+ PIT  S S     +       LSFSGGL+LPKLTIK+     SRRGGG  G    
Sbjct: 3   ALQQTPITFQSRSPPPTQIISGPTAKLSFSGGLKLPKLTIKLRSNRTSRRGGGAAGSKMV 62

Query: 789 XXXXXXXXXXXXXXATSNGTLETTAADVEKVDKLFSDPSVFNFFVSPIVSLEQKRELIDD 610
                         A SNGTLE T AD+EK++K+  D +VFNFFVSPIV  E+KREL+D+
Sbjct: 63  ASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDE 122

Query: 609 ITSSGSLQPHVCNFLNILIESKRIDLIKEIVKEFEVVYNKLTETELAIVTSVVQLEKQHL 430
           I SS S+QPHV NFLNIL++ KR++LIKEIVKEFE VYN LT+TELA+VTSVV+LE QHL
Sbjct: 123 IVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHL 182

Query: 429 AQIAKQVQKLTGAKNVRIKTAIDESLVAGFTIRYGNAQSKLIDMSVKKQLEDIAAQLEIG 250
           AQIAK VQ+LTG+KNVRIKT IDESLVAGFTIRYGN+ SKLIDMSVKKQLEDIAAQLEIG
Sbjct: 183 AQIAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLEIG 242

Query: 249 DIPIPV 232
           DI + V
Sbjct: 243 DIQLAV 248


>ref|XP_002274963.1| PREDICTED: ATP synthase delta chain, chloroplastic [Vitis vinifera]
          Length = 244

 Score =  259 bits (663), Expect = 6e-67
 Identities = 139/243 (57%), Positives = 177/243 (72%), Gaps = 4/243 (1%)
 Frame = -3

Query: 954 SLQRAPITLHS----SSARSNSVNPVNLSFSGGLRLPKLTIKITHRSRRGGGCLGXXXXX 787
           ++Q +P+T  S    S+A+S S  P+NLSFSG     +LT K+  +SR G          
Sbjct: 3   AMQHSPVTFQSRSPPSAAKSLSNKPLNLSFSGNFPSFRLTNKVAGKSRSGAS--SARMSA 60

Query: 786 XXXXXXXXXXXXXATSNGTLETTAADVEKVDKLFSDPSVFNFFVSPIVSLEQKRELIDDI 607
                        A SNGTL+TTA DVEK++K+ SD  V  FF +P + +E+KR ++D+I
Sbjct: 61  TAAGSYATALADVAKSNGTLDTTAEDVEKIEKVLSDEQVLGFFCNPTIDIEKKRNVLDEI 120

Query: 606 TSSGSLQPHVCNFLNILIESKRIDLIKEIVKEFEVVYNKLTETELAIVTSVVQLEKQHLA 427
             +  +QPH  NFLNIL++ KRIDLIKEI KEFE+VYN+LT+TELA+V+SVV+LE +HLA
Sbjct: 121 AKTSGIQPHTMNFLNILVDMKRIDLIKEIAKEFELVYNRLTDTELAVVSSVVKLESEHLA 180

Query: 426 QIAKQVQKLTGAKNVRIKTAIDESLVAGFTIRYGNAQSKLIDMSVKKQLEDIAAQLEIGD 247
           QIAKQVQKLTGAKNVRIKTAID SLVAGFTIRYG+  SKLIDMSVKKQLE+IAA+LE+G+
Sbjct: 181 QIAKQVQKLTGAKNVRIKTAIDPSLVAGFTIRYGSGGSKLIDMSVKKQLEEIAAELELGN 240

Query: 246 IPI 238
           I +
Sbjct: 241 IQL 243


>ref|XP_002327324.1| predicted protein [Populus trichocarpa] gi|222835694|gb|EEE74129.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  251 bits (641), Expect = 2e-64
 Identities = 140/247 (56%), Positives = 174/247 (70%), Gaps = 8/247 (3%)
 Frame = -3

Query: 954 SLQRAPITLHSS---SARS----NSVNPVNLSFSGGLRLPKLTIKITHRSR-RGGGCLGX 799
           +LQ A ++L S    SAR      S  P+NLSFS     P L +  T   R RGG  LG 
Sbjct: 4   ALQNAAVSLQSKIPPSARLPTNFTSPKPLNLSFSA--TFPSLNLSTTTTLRLRGGSALGT 61

Query: 798 XXXXXXXXXXXXXXXXXATSNGTLETTAADVEKVDKLFSDPSVFNFFVSPIVSLEQKREL 619
                            A SN TL+ T++D+ KVDKLFSD +V++FF +P V  E+KR++
Sbjct: 62  KMSAAAAGSYAAALADVAKSNNTLDATSSDMGKVDKLFSDTAVYDFFANPTVDTEKKRQM 121

Query: 618 IDDITSSGSLQPHVCNFLNILIESKRIDLIKEIVKEFEVVYNKLTETELAIVTSVVQLEK 439
           +D+   S  LQPH  NF+NILI++KRIDL+K+IVKEFE+VYN LT+TELA+V+SVV LE 
Sbjct: 122 VDEFAKSSPLQPHTVNFVNILIDAKRIDLVKDIVKEFEMVYNSLTDTELAVVSSVVPLES 181

Query: 438 QHLAQIAKQVQKLTGAKNVRIKTAIDESLVAGFTIRYGNAQSKLIDMSVKKQLEDIAAQL 259
           QHLAQIAKQVQKLTGAKNVR+K  ID SLVAGFT+RYGN+ SKLIDMSVKKQLE+IAAQL
Sbjct: 182 QHLAQIAKQVQKLTGAKNVRVKPVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEEIAAQL 241

Query: 258 EIGDIPI 238
           ++ DI +
Sbjct: 242 DLSDIEL 248


>ref|XP_002325568.1| predicted protein [Populus trichocarpa] gi|222862443|gb|EEE99949.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  243 bits (620), Expect = 5e-62
 Identities = 132/247 (53%), Positives = 171/247 (69%), Gaps = 8/247 (3%)
 Frame = -3

Query: 954 SLQRAPITLHSSSARS-------NSVNPVNLSFSGGLRLPKL-TIKITHRSRRGGGCLGX 799
           +LQ A  +L S +  S        S  P+NLSFS       L T   T   RRGG  LG 
Sbjct: 4   ALQNATASLQSKTPPSARLPTNFTSPKPLNLSFSATFPSLNLSTTATTTNRRRGGSALGT 63

Query: 798 XXXXXXXXXXXXXXXXXATSNGTLETTAADVEKVDKLFSDPSVFNFFVSPIVSLEQKREL 619
                            A SN TL+ TA+D++K+++LFS+P+  +FF +P + LE+KR++
Sbjct: 64  KMSATAAGSYASALADVAISNNTLDATASDIDKIERLFSNPAANDFFTNPTIDLEKKRQV 123

Query: 618 IDDITSSGSLQPHVCNFLNILIESKRIDLIKEIVKEFEVVYNKLTETELAIVTSVVQLEK 439
           +D+   S +LQP   NF+NILI+SKR+DL+K+IV EFE VYNKLT+T+LA+V+SVV LE 
Sbjct: 124 VDEFAKSSALQPLTANFINILIDSKRVDLVKDIVVEFEKVYNKLTDTQLAVVSSVVALES 183

Query: 438 QHLAQIAKQVQKLTGAKNVRIKTAIDESLVAGFTIRYGNAQSKLIDMSVKKQLEDIAAQL 259
           QHLAQIAKQVQKLTGAKNVRIKT ID SLVAGFT+RYG++ SK+IDMSVKKQLE+I AQL
Sbjct: 184 QHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGSSGSKMIDMSVKKQLEEITAQL 243

Query: 258 EIGDIPI 238
           ++ DI +
Sbjct: 244 DLSDIEL 250


>ref|XP_004138373.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis
           sativus] gi|449503764|ref|XP_004162165.1| PREDICTED: ATP
           synthase delta chain, chloroplastic-like [Cucumis
           sativus]
          Length = 240

 Score =  242 bits (618), Expect = 9e-62
 Identities = 131/234 (55%), Positives = 171/234 (73%), Gaps = 5/234 (2%)
 Frame = -3

Query: 918 SARSNSVNPVNLSFSG-----GLRLPKLTIKITHRSRRGGGCLGXXXXXXXXXXXXXXXX 754
           +AR +   PVNLSFS      GLRL      + HRS  G                     
Sbjct: 18  TARISRTTPVNLSFSATFPSRGLRL------VQHRSHGGA-----RMSATAAGSYAAALA 66

Query: 753 XXATSNGTLETTAADVEKVDKLFSDPSVFNFFVSPIVSLEQKRELIDDITSSGSLQPHVC 574
             A SN TL+ T++DVEK++ +F+D  VF+FF +P +S+E+K+ ++D++ SS SLQPH  
Sbjct: 67  EVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKQAVVDEMASSSSLQPHSA 126

Query: 573 NFLNILIESKRIDLIKEIVKEFEVVYNKLTETELAIVTSVVQLEKQHLAQIAKQVQKLTG 394
           NFL IL+++KRID++KEIV EFE+VYNK+T TELA+V+SVVQLE+QHLAQIAKQVQKL+G
Sbjct: 127 NFLKILVDAKRIDILKEIVTEFELVYNKITNTELAVVSSVVQLEQQHLAQIAKQVQKLSG 186

Query: 393 AKNVRIKTAIDESLVAGFTIRYGNAQSKLIDMSVKKQLEDIAAQLEIGDIPIPV 232
           AKNVRIKT ID SLVAGFT+R+GN+ SKLID+SVKKQLE+IAAQL++G+I + V
Sbjct: 187 AKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV 240


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