BLASTX nr result

ID: Atractylodes21_contig00005930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005930
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002192816.2| PREDICTED: LOW QUALITY PROTEIN: actin, cytop...    97   4e-39
ref|XP_003510075.1| PREDICTED: actin, gamma-enteric smooth muscl...    96   5e-39
gb|ADX01226.1| actin 1 [Celosia argentea] gi|356968426|gb|AET432...    97   5e-39
dbj|BAM46130.1| beta actin [Cynops pyrrhogaster]                       97   6e-39
gb|JAA51666.1| Putative actin-related protein, partial [Desmodus...    97   1e-38

>ref|XP_002192816.2| PREDICTED: LOW QUALITY PROTEIN: actin, cytoplasmic type 5
            [Taeniopygia guttata]
          Length = 311

 Score = 96.7 bits (239), Expect(2) = 4e-39
 Identities = 55/141 (39%), Positives = 82/141 (58%)
 Frame = +1

Query: 607  HVPTICFVKQVVLSLFASGHSTGVVWESGHGATPTVPIYQYFVLTDGIVLGPVAGCDVTK 786
            + P +    Q VLSL+ASG +TG+V +SG G T TVPIY+ + L   I+   +AG D+T 
Sbjct: 129  NTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 188

Query: 787  YLQSLLHNGCYWVDGHVGWKYLREMKERFVYVAHDFEYENALAESSNMGTTRYMLSEGRE 966
            YL  +L    Y        + +R++KE+  YVA DFE E A A SS+     Y L +G+ 
Sbjct: 189  YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 248

Query: 967  VSITRLQKIKCAKALFQPHLM 1029
            ++I   ++ +C +ALFQP  +
Sbjct: 249  ITIGN-ERFRCPEALFQPSFL 268



 Score = 92.4 bits (228), Expect(2) = 4e-39
 Identities = 52/125 (41%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = +2

Query: 251 EHMPIIVCDNGSSLMKVGFAYENDP*SVFPTVVGRPNEPH----MTPTKAYVGHEAXXXX 418
           E    +VCDNGS L K GFA ++ P +VFP++VGRP        M    +YVG EA    
Sbjct: 4   EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63

Query: 419 XXXXXXXXIHRGLIVDYDDMETIWVHMFYNVLCVNPANYIALLIEPPNATRNGRMRMA*I 598
                   I  G+I ++DDME IW H FYN L V P  +  LL E P   +  R +M  I
Sbjct: 64  GILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQI 123

Query: 599 MFDMF 613
           MF+ F
Sbjct: 124 MFETF 128


>ref|XP_003510075.1| PREDICTED: actin, gamma-enteric smooth muscle-like isoform 2
           [Cricetulus griseus]
          Length = 375

 Score = 95.9 bits (237), Expect(2) = 5e-39
 Identities = 53/124 (42%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
 Frame = +2

Query: 254 HMPIIVCDNGSSLMKVGFAYENDP*SVFPTVVGRPNEPH----MTPTKAYVGHEAXXXXX 421
           H P +VCDNGS L K GFA ++ P +VFP++VGRP        M    +YVG EA     
Sbjct: 4   HSPPLVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63

Query: 422 XXXXXXXIHRGLIVDYDDMETIWVHMFYNVLCVNPANYIALLIEPPNATRNGRMRMA*IM 601
                  I  G+I ++DDME IW H FYN L V P  +  LL E P   +  R +M  IM
Sbjct: 64  ILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 123

Query: 602 FDMF 613
           F+ F
Sbjct: 124 FETF 127



 Score = 92.8 bits (229), Expect(2) = 5e-39
 Identities = 54/138 (39%), Positives = 80/138 (57%)
 Frame = +1

Query: 607  HVPTICFVKQVVLSLFASGHSTGVVWESGHGATPTVPIYQYFVLTDGIVLGPVAGCDVTK 786
            +VP +    Q VLSL+ASG +TG+V +SG G T  VPIY+ + L   I+   +AG D+T 
Sbjct: 128  NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 187

Query: 787  YLQSLLHNGCYWVDGHVGWKYLREMKERFVYVAHDFEYENALAESSNMGTTRYMLSEGRE 966
            YL  +L    Y        + +R++KE+  YVA DFE E A A SS+     Y L +G+ 
Sbjct: 188  YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 247

Query: 967  VSITRLQKIKCAKALFQP 1020
            ++I   ++ +C + LFQP
Sbjct: 248  ITIGN-ERFRCPETLFQP 264


>gb|ADX01226.1| actin 1 [Celosia argentea] gi|356968426|gb|AET43294.1| actin [Beta
            vulgaris]
          Length = 377

 Score = 97.4 bits (241), Expect(2) = 5e-39
 Identities = 54/141 (38%), Positives = 84/141 (59%)
 Frame = +1

Query: 607  HVPTICFVKQVVLSLFASGHSTGVVWESGHGATPTVPIYQYFVLTDGIVLGPVAGCDVTK 786
            +VP +    Q VLSL+ASG +TG+V +SG G + TVPIY+ + L   I+   +AG D+T 
Sbjct: 130  NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189

Query: 787  YLQSLLHNGCYWVDGHVGWKYLREMKERFVYVAHDFEYENALAESSNMGTTRYMLSEGRE 966
            YL  +L    Y        + +R++KE+  YVA DFE E+  A+SS+     Y L +G+ 
Sbjct: 190  YLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDFEQESETAKSSSAIEKNYELPDGQV 249

Query: 967  VSITRLQKIKCAKALFQPHLM 1029
            ++I   ++ +C + LFQP L+
Sbjct: 250  ITI-GAERFRCPEVLFQPSLI 269



 Score = 91.3 bits (225), Expect(2) = 5e-39
 Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
 Frame = +2

Query: 251 EHMPIIVCDNGSSLMKVGFAYENDP*SVFPTVVGRPNEPH----MTPTKAYVGHEAXXXX 418
           E +  +VCDNG+ ++K GFA ++ P +VFP++VGRP        M    AYVG EA    
Sbjct: 5   EEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64

Query: 419 XXXXXXXXIHRGLIVDYDDMETIWVHMFYNVLCVNPANYIALLIEPPNATRNGRMRMA*I 598
                   I  G++ ++DDME IW H FYN L V P  +  LL E P   +  R +M  I
Sbjct: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124

Query: 599 MFDMF 613
           MF+ F
Sbjct: 125 MFETF 129


>dbj|BAM46130.1| beta actin [Cynops pyrrhogaster]
          Length = 377

 Score = 96.7 bits (239), Expect(2) = 6e-39
 Identities = 55/141 (39%), Positives = 82/141 (58%)
 Frame = +1

Query: 607  HVPTICFVKQVVLSLFASGHSTGVVWESGHGATPTVPIYQYFVLTDGIVLGPVAGCDVTK 786
            + P +    Q VLSL+ASG +TG+V +SG G T TVPIY+ + L   I+   +AG D+T 
Sbjct: 130  NTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 189

Query: 787  YLQSLLHNGCYWVDGHVGWKYLREMKERFVYVAHDFEYENALAESSNMGTTRYMLSEGRE 966
            YL  +L    Y        + +R++KE+  YVA DFE E A A SS+     Y L +G+ 
Sbjct: 190  YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 249

Query: 967  VSITRLQKIKCAKALFQPHLM 1029
            ++I   ++ +C +ALFQP  +
Sbjct: 250  ITIGN-ERFRCPEALFQPSFL 269



 Score = 91.7 bits (226), Expect(2) = 6e-39
 Identities = 51/125 (40%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = +2

Query: 251 EHMPIIVCDNGSSLMKVGFAYENDP*SVFPTVVGRPNEPH----MTPTKAYVGHEAXXXX 418
           E    +VCDNGS L K GFA ++ P +VFP++VGRP        M    +YVG EA    
Sbjct: 5   EDTTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 64

Query: 419 XXXXXXXXIHRGLIVDYDDMETIWVHMFYNVLCVNPANYIALLIEPPNATRNGRMRMA*I 598
                   I  G++ ++DDME IW H FYN L V P  +  LL E P   +  R +M  I
Sbjct: 65  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHI 124

Query: 599 MFDMF 613
           MF+ F
Sbjct: 125 MFETF 129


>gb|JAA51666.1| Putative actin-related protein, partial [Desmodus rotundus]
          Length = 398

 Score = 96.7 bits (239), Expect(2) = 1e-38
 Identities = 55/141 (39%), Positives = 82/141 (58%)
 Frame = +1

Query: 607  HVPTICFVKQVVLSLFASGHSTGVVWESGHGATPTVPIYQYFVLTDGIVLGPVAGCDVTK 786
            + P +    Q VLSL+ASG +TG+V +SG G T TVPIY+ + L   I+   +AG D+T 
Sbjct: 151  NTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 210

Query: 787  YLQSLLHNGCYWVDGHVGWKYLREMKERFVYVAHDFEYENALAESSNMGTTRYMLSEGRE 966
            YL  +L    Y        + +R++KE+  YVA DFE E A A SS+     Y L +G+ 
Sbjct: 211  YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 270

Query: 967  VSITRLQKIKCAKALFQPHLM 1029
            ++I   ++ +C +ALFQP  +
Sbjct: 271  ITIGN-ERFRCPEALFQPSFL 290



 Score = 90.9 bits (224), Expect(2) = 1e-38
 Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
 Frame = +2

Query: 188 AECSNMDIVPYGLIDLLLFIMEHMPIIVCDNGSSLMKVGFAYENDP*SVFPTVVGRPNEP 367
           A C        GL+   L + + +  +V DNGS + K GFA ++ P +VFP++VGRP   
Sbjct: 5   ASCLRRSSAFAGLLHFQLAMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 64

Query: 368 H----MTPTKAYVGHEAXXXXXXXXXXXXIHRGLIVDYDDMETIWVHMFYNVLCVNPANY 535
                M    +YVG EA            I  G++ ++DDME IW H FYN L V P  +
Sbjct: 65  GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 124

Query: 536 IALLIEPPNATRNGRMRMA*IMFDMF 613
             LL E P   +  R +M  IMF+ F
Sbjct: 125 PVLLTEAPLNPKANREKMTQIMFETF 150


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