BLASTX nr result

ID: Atractylodes21_contig00005900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005900
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20604.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CBI27968.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   112   4e-23
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   112   4e-23
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   107   1e-21

>emb|CBI20604.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/99 (59%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -3

Query: 295 MIMGRETLHSNPTVQVPPWDSPFEDPTDHMHSPFSVNGGNSVFFDELEMAAYD-DVGEYD 119
           M++G  T  SNPTVQVPPWD P++DPT  M SPF V+G  S     L    +  + G+  
Sbjct: 1   MMIGEPT-RSNPTVQVPPWD-PYDDPTAGMGSPFPVSGAFSSLQRYLPSNEFGTESGDES 58

Query: 118 DVPSDSFSCDHFRMYEFKVRRCARGRSHDWTECPYAHPG 2
           +   D+FSCD FRM+EFKVRRCARGRSHDWTECPYAHPG
Sbjct: 59  ETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHPG 97


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/106 (51%), Positives = 76/106 (71%), Gaps = 8/106 (7%)
 Frame = -3

Query: 295 MIMGRETLHSNPTVQVPPWDSPFEDPTDHMHSPFSVNGGNSVFF-------DELEMAAYD 137
           M++G E+ H NPTV VPPW   F+DPT  +  P+ V+G +++         +++++ +  
Sbjct: 1   MMIG-ESRHPNPTVLVPPWPH-FDDPTVDISFPYPVSGVSALTALQRYLPSNDVDVDSDS 58

Query: 136 DV-GEYDDVPSDSFSCDHFRMYEFKVRRCARGRSHDWTECPYAHPG 2
           D+ G   D+P D++SCDHFRM+EFKVRRCARGRSHDWTECPYAHPG
Sbjct: 59  DISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPG 104


>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
           vinifera]
          Length = 379

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/121 (50%), Positives = 72/121 (59%), Gaps = 23/121 (19%)
 Frame = -3

Query: 295 MIMGRETLHSNPTVQVPPWDSPFEDPTDHMHSPFSVNGGN------------------SV 170
           M++G  T  SNPTVQVPPWD P++DPT  M SPF V+G N                  S 
Sbjct: 1   MMIGEPT-RSNPTVQVPPWD-PYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISE 58

Query: 169 FFDELEMAAYD-----DVGEYDDVPSDSFSCDHFRMYEFKVRRCARGRSHDWTECPYAHP 5
            F  L+          + G+  +   D+FSCD FRM+EFKVRRCARGRSHDWTECPYAHP
Sbjct: 59  AFSSLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHP 118

Query: 4   G 2
           G
Sbjct: 119 G 119


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/121 (50%), Positives = 72/121 (59%), Gaps = 23/121 (19%)
 Frame = -3

Query: 295 MIMGRETLHSNPTVQVPPWDSPFEDPTDHMHSPFSVNGGN------------------SV 170
           M++G  T  SNPTVQVPPWD P++DPT  M SPF V+G N                  S 
Sbjct: 48  MMIGEPT-RSNPTVQVPPWD-PYDDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISE 105

Query: 169 FFDELEMAAYD-----DVGEYDDVPSDSFSCDHFRMYEFKVRRCARGRSHDWTECPYAHP 5
            F  L+          + G+  +   D+FSCD FRM+EFKVRRCARGRSHDWTECPYAHP
Sbjct: 106 AFSSLQRYLPSNEFGTESGDESETVVDAFSCDQFRMFEFKVRRCARGRSHDWTECPYAHP 165

Query: 4   G 2
           G
Sbjct: 166 G 166


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Glycine max] gi|356520842|ref|XP_003529069.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           20-like isoform 2 [Glycine max]
          Length = 359

 Score =  107 bits (267), Expect = 1e-21
 Identities = 57/114 (50%), Positives = 66/114 (57%), Gaps = 16/114 (14%)
 Frame = -3

Query: 295 MIMGRETLHSNPTVQVPPWDSPFEDPTDHMHSPFSVNGGNSV----------------FF 164
           M++G E   +NPTV VPPW +  +DPT  M+S F  N  N+                 F 
Sbjct: 1   MMLG-EHHRANPTVHVPPWPT-HDDPTAEMYSAFLTNDVNAGEYSPYYLQEALTALQRFL 58

Query: 163 DELEMAAYDDVGEYDDVPSDSFSCDHFRMYEFKVRRCARGRSHDWTECPYAHPG 2
              E  A  D     D   D++SCDHFRMYEFKVRRCARGRSHDWTECPYAHPG
Sbjct: 59  PSNETDADSDTEAQPDAAVDAYSCDHFRMYEFKVRRCARGRSHDWTECPYAHPG 112


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