BLASTX nr result

ID: Atractylodes21_contig00005889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005889
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   625   e-177
ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putat...   607   e-171
ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|2...   599   e-169
ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|2...   593   e-167
gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [S...   583   e-164

>ref|XP_002281000.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6 [Vitis vinifera]
            gi|297743111|emb|CBI35978.3| unnamed protein product
            [Vitis vinifera]
          Length = 479

 Score =  625 bits (1613), Expect = e-177
 Identities = 300/356 (84%), Positives = 331/356 (92%)
 Frame = -2

Query: 1234 VKLSILSYPQSGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRKKYPQFGQ 1055
            +K +++ YP SGRSNDLDQ SH+LT ATRDLF+ELDKNVKPVAPMQFWMVLRKKYPQFGQ
Sbjct: 128  LKSALIKYPHSGRSNDLDQPSHMLTCATRDLFSELDKNVKPVAPMQFWMVLRKKYPQFGQ 187

Query: 1054 LHNGSFMQQDAEECWTQILYTLSQALRSPSSSQDVDTVKKLFGIDLVSRVHCAESGEESL 875
            LHNG FMQQDAEECWTQ+LYTLSQ+LRSP SS+++DTVK+LFG++LVSR+HC ESGEES 
Sbjct: 188  LHNGVFMQQDAEECWTQLLYTLSQSLRSPGSSENLDTVKELFGVELVSRMHCEESGEESS 247

Query: 874  ETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESHINGLPKYLTIQ 695
            ETES+YSLKCHISHEVNHLHEGLKHGLKSELEKASP+LGRSA+Y+KES INGLP+YLTIQ
Sbjct: 248  ETESVYSLKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAIYVKESRINGLPRYLTIQ 307

Query: 694  FVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQMLRDEEGRKAGLKLK 515
            FVRFFWKRESNQKAKILRKVDYPLELD++DLCSDDLRKKLEAPRQ+LRDEEG+K GL   
Sbjct: 308  FVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDDLRKKLEAPRQILRDEEGKKLGL--- 364

Query: 514  EKSSASVDNDVKMSDAEGQPNGSGESSKATSGEGVVSDKKRQLTGVYDLVAVLTHKGRSA 335
             K+SAS DNDVKM+DAEG  N SGESS ATS EGV +DK+  LTG+YDLVAVLTHKGRSA
Sbjct: 365  -KNSASKDNDVKMADAEGSSNRSGESSLATSDEGVPTDKETHLTGIYDLVAVLTHKGRSA 423

Query: 334  DSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIDM 167
            DSGHYVAWVKQE+GKWI+FDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTI M
Sbjct: 424  DSGHYVAWVKQESGKWIEFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIPM 479


>ref|XP_002534122.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223525817|gb|EEF28259.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 482

 Score =  607 bits (1564), Expect = e-171
 Identities = 292/356 (82%), Positives = 324/356 (91%)
 Frame = -2

Query: 1234 VKLSILSYPQSGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRKKYPQFGQ 1055
            +K +++ YP S R NDLDQ+SH+LT ATR+LFNELDK+VKPVAPMQFWMVLRKKYPQFGQ
Sbjct: 128  LKSALVKYP-SDRRNDLDQTSHMLTTATRELFNELDKSVKPVAPMQFWMVLRKKYPQFGQ 186

Query: 1054 LHNGSFMQQDAEECWTQILYTLSQALRSPSSSQDVDTVKKLFGIDLVSRVHCAESGEESL 875
            LHNG FMQQDAEECWTQ+LYTLSQ+LR PS S++ DTVK+LFGIDLVSR+HC ESGEES 
Sbjct: 187  LHNGLFMQQDAEECWTQLLYTLSQSLRPPSPSENPDTVKELFGIDLVSRIHCQESGEESS 246

Query: 874  ETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESHINGLPKYLTIQ 695
            ETES+YSLKCHIS +VNHLHEGLKHGLKSELEKASP+LGRSA+YLKES IN LP+YLT+Q
Sbjct: 247  ETESVYSLKCHISQDVNHLHEGLKHGLKSELEKASPSLGRSAIYLKESCINDLPRYLTVQ 306

Query: 694  FVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQMLRDEEGRKAGLKLK 515
            FVRFFWKRESNQKAKILRKVDYPLELD++D CS DLRK+LEAPRQ+LRDEEGRK GLK+ 
Sbjct: 307  FVRFFWKRESNQKAKILRKVDYPLELDVYDFCSADLRKQLEAPRQILRDEEGRKLGLKVN 366

Query: 514  EKSSASVDNDVKMSDAEGQPNGSGESSKATSGEGVVSDKKRQLTGVYDLVAVLTHKGRSA 335
            EKSS S DNDVKM+DAEG  +GSGESSKATS EG  S K   LTG+YDLVAVLTHKGRSA
Sbjct: 367  EKSSGSKDNDVKMTDAEGPSSGSGESSKATSEEGESSHKVSSLTGIYDLVAVLTHKGRSA 426

Query: 334  DSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIDM 167
            DSGHYVAWVKQE+GKWI++DDDNPIPQREEDITKLSGGGDWHMAYICMYKAR + M
Sbjct: 427  DSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHMAYICMYKARAVPM 482


>ref|XP_002327426.1| predicted protein [Populus trichocarpa] gi|222835980|gb|EEE74401.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  599 bits (1544), Expect = e-169
 Identities = 287/352 (81%), Positives = 323/352 (91%)
 Frame = -2

Query: 1234 VKLSILSYPQSGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRKKYPQFGQ 1055
            +K ++ +YP S +S+DLDQ+SH+LT ATR+LFNELDK+VKPVAPMQFWMVLRKKYPQFGQ
Sbjct: 128  LKSALSNYP-SQKSSDLDQTSHMLTAATRELFNELDKSVKPVAPMQFWMVLRKKYPQFGQ 186

Query: 1054 LHNGSFMQQDAEECWTQILYTLSQALRSPSSSQDVDTVKKLFGIDLVSRVHCAESGEESL 875
            LHNG +MQQDAEECWTQ+LYTLSQ+LRSPS SQ+ DT+K+LFGI+LVSRVHC ESGEES 
Sbjct: 187  LHNGVYMQQDAEECWTQLLYTLSQSLRSPSPSQNPDTIKELFGIELVSRVHCQESGEESS 246

Query: 874  ETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESHINGLPKYLTIQ 695
            ETES+YSLKCHIS EVNHLHEGLKHGLKSELEKASP+LGRSA+YLKES IN LP+YLT+Q
Sbjct: 247  ETESVYSLKCHISQEVNHLHEGLKHGLKSELEKASPSLGRSAIYLKESCINALPRYLTVQ 306

Query: 694  FVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQMLRDEEGRKAGLKLK 515
            FVRFFWKRESNQKAKILRKVDYPL+LD++D CSDDLRK LEAPRQ+LRDEEG+KAGLK K
Sbjct: 307  FVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSDDLRKNLEAPRQILRDEEGKKAGLKAK 366

Query: 514  EKSSASVDNDVKMSDAEGQPNGSGESSKATSGEGVVSDKKRQLTGVYDLVAVLTHKGRSA 335
             KSS+S DND KM+D EG  N S +SS +TSGEG  SDK+  LTG+YDLVAVLTHKGRSA
Sbjct: 367  VKSSSSKDNDAKMTDVEGPSNESVKSSNSTSGEGGSSDKESHLTGIYDLVAVLTHKGRSA 426

Query: 334  DSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKAR 179
            DSGHYVAWVKQE+GKWI++DDDNPIPQREEDITKLSGGGDWHMAYICMYKAR
Sbjct: 427  DSGHYVAWVKQESGKWIEYDDDNPIPQREEDITKLSGGGDWHMAYICMYKAR 478


>ref|XP_002329033.1| predicted protein [Populus trichocarpa] gi|222839704|gb|EEE78027.1|
            predicted protein [Populus trichocarpa]
          Length = 486

 Score =  593 bits (1530), Expect = e-167
 Identities = 287/356 (80%), Positives = 320/356 (89%)
 Frame = -2

Query: 1234 VKLSILSYPQSGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRKKYPQFGQ 1055
            +K +++SYP S +S+DLD +SH+LT ATR+LFNELDK+VKPVAPMQFWMVLRKKYPQFGQ
Sbjct: 136  LKSALVSYP-SQKSSDLDHTSHMLTAATRELFNELDKSVKPVAPMQFWMVLRKKYPQFGQ 194

Query: 1054 LHNGSFMQQDAEECWTQILYTLSQALRSPSSSQDVDTVKKLFGIDLVSRVHCAESGEESL 875
            LHNG +MQQDAEECWTQ+LYTLSQ+L SPS S++ DT+K LFGI+LVSRVHC ES EES 
Sbjct: 195  LHNGLYMQQDAEECWTQLLYTLSQSLGSPSFSENPDTIKALFGIELVSRVHCQESSEESS 254

Query: 874  ETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESHINGLPKYLTIQ 695
            ETES+YSLKCHIS EVNHLHEGLKHGLKSELEKASP LGRSA+YLKES IN LP+YLT+Q
Sbjct: 255  ETESVYSLKCHISQEVNHLHEGLKHGLKSELEKASPCLGRSAIYLKESRINALPRYLTVQ 314

Query: 694  FVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQMLRDEEGRKAGLKLK 515
            FVRFFWKRESNQKAKILRKVDYPL+LD++D CSDDL KKLEAPRQ+LRDEEG+KAGLK K
Sbjct: 315  FVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSDDLCKKLEAPRQILRDEEGKKAGLKAK 374

Query: 514  EKSSASVDNDVKMSDAEGQPNGSGESSKATSGEGVVSDKKRQLTGVYDLVAVLTHKGRSA 335
            EK+S S DNDVKM+D E   N SGESSK TS E    DKK  LTG+YDLVAVLTHKGRSA
Sbjct: 375  EKTSGSKDNDVKMTDVERPSNESGESSKPTSKE----DKKSHLTGIYDLVAVLTHKGRSA 430

Query: 334  DSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIDM 167
            DSGHYVAWVKQE+GKWI+FDDDNP+PQREEDITKLSGGGDWHMAYICMYKART+ M
Sbjct: 431  DSGHYVAWVKQESGKWIEFDDDNPVPQREEDITKLSGGGDWHMAYICMYKARTVPM 486


>gb|AEL99139.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
          Length = 476

 Score =  583 bits (1502), Expect = e-164
 Identities = 277/354 (78%), Positives = 315/354 (88%)
 Frame = -2

Query: 1234 VKLSILSYPQSGRSNDLDQSSHLLTVATRDLFNELDKNVKPVAPMQFWMVLRKKYPQFGQ 1055
            +K ++L Y QSGRSNDLDQ+SHLLTVAT+DLF++LDKN KPVAPMQFWMVLRKK+PQFGQ
Sbjct: 124  LKSALLEYSQSGRSNDLDQTSHLLTVATKDLFSDLDKNAKPVAPMQFWMVLRKKFPQFGQ 183

Query: 1054 LHNGSFMQQDAEECWTQILYTLSQALRSPSSSQDVDTVKKLFGIDLVSRVHCAESGEESL 875
            LHNGSFMQQDAEECWTQ+LYTLSQ+L+S S+  ++  VK LFG+DL SRV+C ESGEE+ 
Sbjct: 184  LHNGSFMQQDAEECWTQLLYTLSQSLKSSSAGDNLSAVKALFGVDLASRVYCQESGEETT 243

Query: 874  ETESIYSLKCHISHEVNHLHEGLKHGLKSELEKASPALGRSAVYLKESHINGLPKYLTIQ 695
            E ES ++LKCHISHEVNHLHEGLKHGLKSELEK SP LGRSA+Y KES I+GLP+YLTIQ
Sbjct: 244  EVESTFALKCHISHEVNHLHEGLKHGLKSELEKNSPTLGRSAIYFKESRISGLPRYLTIQ 303

Query: 694  FVRFFWKRESNQKAKILRKVDYPLELDIFDLCSDDLRKKLEAPRQMLRDEEGRKAGLKLK 515
            FVRFFWKRESNQKAKILRKVDYPLELD+FD CSD+L+KKLE+PRQ+LRDEEG K GLK  
Sbjct: 304  FVRFFWKRESNQKAKILRKVDYPLELDVFDFCSDELKKKLESPRQILRDEEGIKLGLKPS 363

Query: 514  EKSSASVDNDVKMSDAEGQPNGSGESSKATSGEGVVSDKKRQLTGVYDLVAVLTHKGRSA 335
            E+SS+S D D+KM D E   NG GESS  TS +G + +++ QLTGVYDLVAVLTHKGRSA
Sbjct: 364  EQSSSSKDKDIKMVDVEVSSNGCGESSSGTSQDG-LPEREAQLTGVYDLVAVLTHKGRSA 422

Query: 334  DSGHYVAWVKQENGKWIQFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTI 173
            DSGHYVAWVKQENGKW+++DDDNPIPQREEDI KLSGGGDWHMAYICMYKARTI
Sbjct: 423  DSGHYVAWVKQENGKWVEYDDDNPIPQREEDIVKLSGGGDWHMAYICMYKARTI 476


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