BLASTX nr result

ID: Atractylodes21_contig00005872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005872
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   209   1e-52
ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   206   1e-51
ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   206   1e-51
ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis] gi...   204   6e-51
gb|ACJ86266.1| unknown [Medicago truncatula]                          204   6e-51

>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
            gi|449495626|ref|XP_004159898.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
          Length = 1098

 Score =  209 bits (533), Expect = 1e-52
 Identities = 99/119 (83%), Positives = 103/119 (86%)
 Frame = -1

Query: 407  DHVLPMVDDSWRGKFERVREDGFSRLQAFWVLREIVVPIIMKLLTALCVPYVLARGVFPV 228
            DH++P+VDDSWR KFERVREDGFSRLQ  WVLREIVVPIIMKLLTALCVPYVLARGVFPV
Sbjct: 939  DHMIPLVDDSWRVKFERVREDGFSRLQGLWVLREIVVPIIMKLLTALCVPYVLARGVFPV 998

Query: 227  FGYPLVVNSAVYRFAWXXXXXXXXXXXXGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE 51
            FGYPL+VNSAVYRFAW             KRFHVWFTNLHNSIRDDRYLIGRRLHNFGE
Sbjct: 999  FGYPLIVNSAVYRFAWIGCLCVSVLYFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE 1057


>ref|XP_003528520.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1124

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/120 (80%), Positives = 103/120 (85%)
 Frame = -1

Query: 407  DHVLPMVDDSWRGKFERVREDGFSRLQAFWVLREIVVPIIMKLLTALCVPYVLARGVFPV 228
            DH++P+VD+SWR KFERVREDGFSRLQ  WVLREIV+PIIMKLLTALCVPYVLA+GVFPV
Sbjct: 961  DHMMPLVDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLAKGVFPV 1020

Query: 227  FGYPLVVNSAVYRFAWXXXXXXXXXXXXGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 48
             GYPLV+NSAVYRFAW             KRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH
Sbjct: 1021 LGYPLVINSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 1080


>ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1123

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/120 (80%), Positives = 103/120 (85%)
 Frame = -1

Query: 407  DHVLPMVDDSWRGKFERVREDGFSRLQAFWVLREIVVPIIMKLLTALCVPYVLARGVFPV 228
            DH++P+VD+SWR KFERVREDGFSRLQ  WVLREIV+PIIMKLLTALCVPYVLA+GVFPV
Sbjct: 960  DHMMPLVDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLAKGVFPV 1019

Query: 227  FGYPLVVNSAVYRFAWXXXXXXXXXXXXGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 48
             GYPLV+NSAVYRFAW             KRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH
Sbjct: 1020 LGYPLVINSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 1079


>ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis]
           gi|223542111|gb|EEF43655.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 214

 Score =  204 bits (519), Expect = 6e-51
 Identities = 97/119 (81%), Positives = 102/119 (85%)
 Frame = -1

Query: 407 DHVLPMVDDSWRGKFERVREDGFSRLQAFWVLREIVVPIIMKLLTALCVPYVLARGVFPV 228
           DH++P+VD+SWR KFERVREDGFSRLQ+ WVLREIV PIIMKLLTALCVPYVLARGVFPV
Sbjct: 49  DHMMPLVDESWRIKFERVREDGFSRLQSLWVLREIVFPIIMKLLTALCVPYVLARGVFPV 108

Query: 227 FGYPLVVNSAVYRFAWXXXXXXXXXXXXGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE 51
            GYPLVVNSAVYRFAW             KRFHVWFTNLHNSIRDDRYLIGRRLHNFGE
Sbjct: 109 LGYPLVVNSAVYRFAWLGCLCFSVLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGE 167


>gb|ACJ86266.1| unknown [Medicago truncatula]
          Length = 197

 Score =  204 bits (519), Expect = 6e-51
 Identities = 95/120 (79%), Positives = 102/120 (85%)
 Frame = -1

Query: 407 DHVLPMVDDSWRGKFERVREDGFSRLQAFWVLREIVVPIIMKLLTALCVPYVLARGVFPV 228
           DH++P++D+SWR KFERVR+DGFSRLQ  WVLREIV+PIIMKLLTALCVPYVLARGVFP 
Sbjct: 34  DHMMPLMDESWRVKFERVRDDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPA 93

Query: 227 FGYPLVVNSAVYRFAWXXXXXXXXXXXXGKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 48
            GYPLVVNSAVYRFAW             KRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH
Sbjct: 94  LGYPLVVNSAVYRFAWSGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEH 153


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