BLASTX nr result

ID: Atractylodes21_contig00005871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005871
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_003627716.1| Splicing factor 4-like protein [Medicago tru...   152   2e-35
ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...   150   1e-34
ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containin...   149   2e-34

>ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|222850432|gb|EEE87979.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/83 (87%), Positives = 79/83 (95%)
 Frame = -2

Query: 491 KEATERAKIQADNVGHRLLSKMGWKEGEGLGSSRSGIADPITAGNVKKDHLGVGASIPGE 312
           KEA ERA+IQADNVGH+LLSKMGWKEGEGLGSSRSGI++PI AGNVKKDHLGVGA  PGE
Sbjct: 348 KEAAERARIQADNVGHKLLSKMGWKEGEGLGSSRSGISNPIMAGNVKKDHLGVGAHNPGE 407

Query: 311 VTPEDDIYEQYKKRMMLGYRHRP 243
           V+P+DDIYEQYKKRMMLGYRHRP
Sbjct: 408 VSPDDDIYEQYKKRMMLGYRHRP 430


>ref|XP_003627716.1| Splicing factor 4-like protein [Medicago truncatula]
           gi|355521738|gb|AET02192.1| Splicing factor 4-like
           protein [Medicago truncatula]
          Length = 498

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/83 (87%), Positives = 77/83 (92%)
 Frame = -2

Query: 491 KEATERAKIQADNVGHRLLSKMGWKEGEGLGSSRSGIADPITAGNVKKDHLGVGASIPGE 312
           KEA ERAKIQA+NVGH+LLSKMGWKEGEGLG SR GIADPI AG+VKKD+LGVGA  PGE
Sbjct: 405 KEAAERAKIQANNVGHKLLSKMGWKEGEGLGGSRKGIADPIMAGSVKKDNLGVGAVQPGE 464

Query: 311 VTPEDDIYEQYKKRMMLGYRHRP 243
           VTPEDDIYEQYKKRMMLGYRHRP
Sbjct: 465 VTPEDDIYEQYKKRMMLGYRHRP 487


>ref|XP_002298445.1| predicted protein [Populus trichocarpa] gi|222845703|gb|EEE83250.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/82 (86%), Positives = 77/82 (93%)
 Frame = -2

Query: 488 EATERAKIQADNVGHRLLSKMGWKEGEGLGSSRSGIADPITAGNVKKDHLGVGASIPGEV 309
           EA ERAKIQADNVGH+LLSKMGWKEGEGLGSSR+GI++PI AG+VKKDHLGVGA  PGEV
Sbjct: 358 EAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRNGISNPIMAGDVKKDHLGVGAHNPGEV 417

Query: 308 TPEDDIYEQYKKRMMLGYRHRP 243
           T +DDIYEQYKKRMMLGYRHRP
Sbjct: 418 TADDDIYEQYKKRMMLGYRHRP 439


>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
           communis] gi|223547687|gb|EEF49180.1| arginine/serine
           rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -2

Query: 491 KEATERAKIQADNVGHRLLSKMGWKEGEGLGSSRSGIADPITAGNVKKDHLGVGASIPGE 312
           KE+ ER+KIQADNVGH+LLSKMGWKEGEGLGS+RSGIADPI AGNVK ++LGVGA  PGE
Sbjct: 348 KESAERSKIQADNVGHKLLSKMGWKEGEGLGSARSGIADPIKAGNVKTNNLGVGAHQPGE 407

Query: 311 VTPEDDIYEQYKKRMMLGYRHRP 243
           VTPEDDIYEQYKKRMMLGYR+RP
Sbjct: 408 VTPEDDIYEQYKKRMMLGYRYRP 430


>ref|XP_004135917.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
           protein-like [Cucumis sativus]
           gi|449489072|ref|XP_004158206.1| PREDICTED: SURP and
           G-patch domain-containing protein 1-like protein-like
           [Cucumis sativus]
          Length = 446

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/83 (85%), Positives = 78/83 (93%)
 Frame = -2

Query: 491 KEATERAKIQADNVGHRLLSKMGWKEGEGLGSSRSGIADPITAGNVKKDHLGVGASIPGE 312
           KEA ++AKIQADNVGHRLLSKMGWKEGEGLGSS+SGIADPI AG+VK ++LGVGA  PGE
Sbjct: 353 KEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPGE 412

Query: 311 VTPEDDIYEQYKKRMMLGYRHRP 243
           VTPEDDIYEQYKKRMMLGYR+RP
Sbjct: 413 VTPEDDIYEQYKKRMMLGYRYRP 435


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