BLASTX nr result

ID: Atractylodes21_contig00005866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00005866
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]   100   2e-25
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              100   2e-25
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   100   2e-25
ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...    93   2e-25
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...    85   7e-23

>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score =  100 bits (248), Expect(2) = 2e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +2

Query: 209  LANARAQVPNAHDEIKMATSRLRLRENEDDKSIDGLSLEELEAANVENSSEKFLAFSLLS 388
            LA A+AQV  AHDEIKMATSRLRLRE+E+DKSID LSL EL+AA VENSSE+ ++ +LLS
Sbjct: 1980 LAIAQAQVLRAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLS 2039

Query: 389  RIKGQRRYLK 418
            RIKGQ RYLK
Sbjct: 2040 RIKGQLRYLK 2049



 Score = 42.0 bits (97), Expect(2) = 2e-25
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 78   MVSKSPSELEVVLEIIKCYSKVLLDKEAMSAAKNHLFLLE 197
            +VSKSPSELEVVL +IK   K  L +E  S A   L LLE
Sbjct: 1929 VVSKSPSELEVVLGVIKSSCKAQLGREGQSEATKQLLLLE 1968



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 427  AMTEQRIKYHGKSHEKWVMCPTCRHHTEFGNIAYVDDRQNKPRD 558
            AMTE+R+ +HGK  +KW+MCPTCR HT+ GNIAY DDRQ K  D
Sbjct: 2123 AMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCD 2166


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  100 bits (248), Expect(2) = 2e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +2

Query: 209  LANARAQVPNAHDEIKMATSRLRLRENEDDKSIDGLSLEELEAANVENSSEKFLAFSLLS 388
            LA A+AQV  AHDEIKMATSRLRLRE+E+DKSID LSL EL+AA VENSSE+ ++ +LLS
Sbjct: 1281 LAIAQAQVLRAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLS 1340

Query: 389  RIKGQRRYLK 418
            RIKGQ RYLK
Sbjct: 1341 RIKGQLRYLK 1350



 Score = 42.0 bits (97), Expect(2) = 2e-25
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 78   MVSKSPSELEVVLEIIKCYSKVLLDKEAMSAAKNHLFLLE 197
            +VSKSPSELEVVL +IK   K  L +E  S A   L LLE
Sbjct: 1230 VVSKSPSELEVVLGVIKSSCKAQLGREGQSEATKQLLLLE 1269



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 427  AMTEQRIKYHGKSHEKWVMCPTCRHHTEFGNIAYVDDRQNKPRD 558
            AMTE+R+ +HGK  +KW+MCPTCR HT+ GNIAY DDRQ K  D
Sbjct: 1424 AMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCD 1467


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  100 bits (248), Expect(2) = 2e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +2

Query: 209  LANARAQVPNAHDEIKMATSRLRLRENEDDKSIDGLSLEELEAANVENSSEKFLAFSLLS 388
            LA A+AQV  AHDEIKMATSRLRLRE+E+DKSID LSL EL+AA VENSSE+ ++ +LLS
Sbjct: 1256 LAIAQAQVLRAHDEIKMATSRLRLREDENDKSIDALSLNELDAAIVENSSERLMSLTLLS 1315

Query: 389  RIKGQRRYLK 418
            RIKGQ RYLK
Sbjct: 1316 RIKGQLRYLK 1325



 Score = 42.0 bits (97), Expect(2) = 2e-25
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 78   MVSKSPSELEVVLEIIKCYSKVLLDKEAMSAAKNHLFLLE 197
            +VSKSPSELEVVL +IK   K  L +E  S A   L LLE
Sbjct: 1205 VVSKSPSELEVVLGVIKSSCKAQLGREGQSEATKQLLLLE 1244



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 427  AMTEQRIKYHGKSHEKWVMCPTCRHHTEFGNIAYVDDRQNKPRD 558
            AMTE+R+ +HGK  +KW+MCPTCR HT+ GNIAY DDRQ K  D
Sbjct: 1399 AMTEKRLVHHGKFQDKWLMCPTCRQHTDVGNIAYADDRQTKSCD 1442


>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
            gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
            helicase, putative [Ricinus communis]
          Length = 1588

 Score = 93.2 bits (230), Expect(2) = 2e-25
 Identities = 48/70 (68%), Positives = 58/70 (82%)
 Frame = +2

Query: 209  LANARAQVPNAHDEIKMATSRLRLRENEDDKSIDGLSLEELEAANVENSSEKFLAFSLLS 388
            LA A+AQ+ +AHDEIKMATSRL LRENEDD S+D L   ELE+A+V  SSEKF++ +LLS
Sbjct: 1176 LAVAQAQILHAHDEIKMATSRLHLRENEDDNSLDALGPNELESASVLQSSEKFISLTLLS 1235

Query: 389  RIKGQRRYLK 418
            RIKG+ RYLK
Sbjct: 1236 RIKGRLRYLK 1245



 Score = 48.9 bits (115), Expect(2) = 2e-25
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +3

Query: 78   MVSKSPSELEVVLEIIKCYSKVLLDKEAMSAAKNHLFLLE 197
            +VSKSPSELEVVL ++K Y K+ L KE +SAA   L +LE
Sbjct: 1125 VVSKSPSELEVVLGVVKSYCKIQLGKEGISAASKQLHILE 1164


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222870983|gb|EEF08114.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1320

 Score = 85.1 bits (209), Expect(2) = 7e-23
 Identities = 43/71 (60%), Positives = 58/71 (81%)
 Frame = +2

Query: 209  LANARAQVPNAHDEIKMATSRLRLRENEDDKSIDGLSLEELEAANVENSSEKFLAFSLLS 388
            LA A+AQ+  AHDE+KMAT+RL LRENE+D S+D L  +ELE+A+V +S+EKF++ +LLS
Sbjct: 1248 LAVAQAQLLRAHDELKMATARLHLRENENDTSMDALGEDELESASVLHSNEKFMSLNLLS 1307

Query: 389  RIKGQRRYLKV 421
              KG+ RYLKV
Sbjct: 1308 HTKGKLRYLKV 1318



 Score = 48.1 bits (113), Expect(2) = 7e-23
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +3

Query: 78   MVSKSPSELEVVLEIIKCYSKVLLDKEAMSAAKNHLFLLE 197
            MVSKSPSELEV+L +IK Y K  L+ EA+SAA   + +LE
Sbjct: 1197 MVSKSPSELEVILGVIKSYCKAQLENEAVSAASLQIHILE 1236


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